Balaenoptera acutorostrata scammoni (minke whale): 103011534
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Entry
103011534 CDS
T03086
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu03013
Nucleocytoplasmic transport
bacu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103011534
03015 mRNA surveillance pathway
103011534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bacu03019
]
103011534
03041 Spliceosome [BR:
bacu03041
]
103011534
Messenger RNA biogenesis [BR:
bacu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103011534
Spliceosome [BR:
bacu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
103011534
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
FliX
Motif
Other DBs
NCBI-GeneID:
103011534
NCBI-ProteinID:
XP_007178763
UniProt:
A0A383ZUH0
LinkDB
All DBs
Position
Un
AA seq
907 aa
AA seq
DB search
MDAGFFRGTSAEQDNRXXXFSNKQKKLLKXLKCAECLEKKVDMSKVNLEVIKPWITKRVT
EILGFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIA
GIPSAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKS
RSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQE
ATSTSDILKVPKPEPVPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTR
PRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSG
SSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTP
QQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAAD
SVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQ
KETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRSPTPPPRRRTPSPPPRRRSPSPRRYS
PPIQRRYSPSPPPKRRTASPPPPPKRRVSPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLS
SKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPAVRRGASPSPQRRQSPSPG
SRPIRRVSRTPEPRKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSPVQSQSPS
TNWSPAVPVKKAKSPTPSPSPARNSDPEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAV
AAAAAAPVTPAAIAAPTAASAQEEPEAEPEPKKETESEAEDNLDDLEKHLREKALRSMRK
AQVSPQS
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggaacaagtgcagaacaggataatcgnnnnnnnnnnttc
agcaacaaacagaagaagctactgaagtagctgaaatgtgcagaatgcctagaaaaaaag
gtggacatgagcaaagtaaatttggaggttataaagccttggataacaaaacgagtaacg
gaaatccttgggtttgaagatgatgttgtgattgagtttatattcaaccagctggaagtg
aagaatccagactccaaaatgatgcaaatcaacctgactgggtttttgaatggaaaaaat
gctagagaatttatgggagagctgtggcccctgctcttaagcgcacaagaaaacatcgct
ggaatcccttctgctttcctagagctgaagaaagaagaaataaaacagagacagattgaa
caagaaaagttggcatctatgaaaaagcaagatgaagacaaggataagagggataaggaa
gaaaaagaaagcagcagagaaaaaagggagcggtctcgaagcccaagaagacgcaaatcc
agatctccttcccctagaagacgatcttcccctgtcaggagagagagaaagcgcagtcat
tctcgatctccccgtcacagaaccaagagccggagtccttcccctgctccagagaagaag
gaaaaaactccagagctcccagagccgtcagtgaaagtaaaagaaccttcagtacaagag
gccacttctactagtgacatcctgaaagttcccaagcctgaaccagtaccagagcctaaa
gaaccttctccggagaaaaactccaaaaaggaaaaggaaaaggagaagacccgaccaaga
tctcggtcgcgttccaagtcaagatcccggacacgttctcgctctccttctcatactcga
ccgagaagacgccatagatcccgatcaagatcatactcacctagaaggcggccaagccca
agaagacggccatctcctcgaagaagaactccaccgagacgaatgcctcctccaccaagg
catagaaggagtagatctccagtgagacgaagaaggcgttcatcggcatccttgtctggg
agtagctcgtcctcttcttcatctcgttcccggtcaccgccaaagaagcctccaaagagg
acatccagcccccctcgaaaaactcgtaggttatctccttcagcaagtcctccgaggcga
aggcacaggccatcacctccagcaactccaccaccaaaaactcgtcattccccgacaccc
cagcagtcaaaccgtacgaggaaaagtcgtgtttctgtctctccagggagaacttcaggt
aaagtgacaaaacataaaggtactgagaaaagagagtccccttcaccagcacccaagcct
agaaaagtagagttatctgaatcagaagaagataaaggtggcaaaatggctgcagcagat
tctgtgcagcagagacgccaatacagacgacagaaccagcagtcttcctctgattctggc
tcctcctcttcctcagaagatgagcgacccaaaaggtcccacgtgaagaatggtgaggta
ggcaggcggcggagacattccccttcccggagtgcctctccatcacctcggaagcgccag
aaagagacttcccctcgtggtagacggaggagaagtccctccccaccgcctaccagaagg
cgacgttctccttctcctgctcctccgcctcgtcgacgcaggtctcccacaccaccacca
cgacgaaggactccttctcctcccccacgtcgtcgctcaccttccccaagaagatactct
cctccaatacagaggagatattctccttctccacctccaaagagaagaacggcttcaccc
cctccccctcctaaacgaagggtatcaccgtctccaccaccaaagcgtcgggtctcccat
tcgccacctcccaaacaaagaagctccccagtcaccaagagacgttcgccttcattgtca
tcaaagcataggaaagggtcttccccgagccgatctacccgggaggcccggtcaccacaa
ccaaacaaacggcattcgccctcaccacggcctcgagctcctcagacctcctcaagtcct
ccagctgttcgaagaggagcatcaccatcaccccaaagaaggcagtccccatctccaggt
tctaggcccattaggagagtctccaggactccggagcccagaaagataaaaaaagctgcc
tcaccaagccctcagtcggtaaggagggtctcatcttcccgatctgtctcgggatctcct
gagccagcagctaaaaaacccccagcacctccatcccctgtccagtctcagtcaccctct
accaactggtcaccggcggtaccagttaaaaaggctaaaagcccaacaccaagcccatca
ccggcaaggaattcagacccagaaggaggtggaaagaagaagaagaaaaagaaggacaag
aaacacaaaaaggataagaagcacaagaagcacaaaaaacacaagaaggaaaaggctgta
gctgcagctgctgcagcccctgtaacccctgcggccatcgctgctcccacagccgcgtca
gcacaggaagaaccagaggcagagccagagcctaagaaggagactgaaagtgaggctgaa
gataaccttgatgacttagaaaagcacctgcgtgaaaaggccctgagatcaatgcggaag
gctcaagtgtccccacagtcctag
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