Balaenoptera acutorostrata scammoni (minke whale): 103014193
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Entry
103014193 CDS
T03086
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu03082
ATP-dependent chromatin remodeling
bacu04714
Thermogenesis
bacu05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103014193 (SMARCC2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
103014193 (SMARCC2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
103014193 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bacu03021
]
103014193 (SMARCC2)
03036 Chromosome and associated proteins [BR:
bacu03036
]
103014193 (SMARCC2)
Transcription machinery [BR:
bacu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103014193 (SMARCC2)
Chromosome and associated proteins [BR:
bacu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103014193 (SMARCC2)
PBAF complex
103014193 (SMARCC2)
GBAF(ncBAF) complex
103014193 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
CD99L2
Motif
Other DBs
NCBI-GeneID:
103014193
NCBI-ProteinID:
XP_007179870
LinkDB
All DBs
Position
Un
AA seq
1170 aa
AA seq
DB search
MRPSLVALRGRLDLCAKQYPVQPTLKVWAPAGSAGRFGFLETVFIEYLFGKNYKKYIQAE
PPTNKSLSSLVVQLLQFQEEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKS
DQGWRRYDFQNPSRMDRNVEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIVKR
HQGTVTEDKNNASHVVYPVPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIE
ASVEDAPTPEKPRKVHAKWILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVN
SPDSDRRDKKGGNYKKRKRSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKD
MDEPSPVPNVEEVTLPKTVNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGN
KGEQTKNPDLHEDNVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIY
LAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTP
MGPPPTSHFHVLADTPSGLVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQ
TSASQQMLNFPDKGKEKPTDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLE
ALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGN
PVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADP
AFGLESSGIAGTTSDEPERIEESGTDEARAEGQATEEKKEPKEPREGVGAIEEEAKEKTS
EAPKKDDEKGKDGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVER
DIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELET
IMDREREALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQPPPQTLPPGSQP
VPPAGAAGPPAVHGLALAPASVAPASAGSGAPPGSLGPSEQIGQAGSTAVPQQQQAAGAP
QPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPS
ASPLPDPGAPLPPDPTAPSPGTVTPVPPTQ
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgaggccatcgctggtggcccttagaggaagactggacctctgtgccaagcaataccct
gttcagcccaccttaaaggtgtgggctcccgctgggtctgcaggtagatttggttttttg
gaaacagtattcattgaatatctattcggcaagaactacaagaagtatatacaagctgaa
ccacctaccaacaagtccctgtctagcctggttgtacagttgctacaatttcaggaagaa
gtttttggcaaacatgtcagcaatgcaccgctcactaaactgccgatcaaatgtttccta
gatttcaaagcaggaggctccctgtgccacatacttgcagctgcctacaaattcaagagt
gaccagggatggcggcgttacgatttccagaatccatcacgcatggaccgcaacgtggaa
atgttcatgaccattgagaaatctttggtgcagaataattgcctgtctcgacctaacatt
tttctgtgcccagaaattgaacccaaactgctagggaaattaaaagacattgtcaagaga
catcagggaacggtcactgaggataagaacaatgcctcccatgtcgtgtatcctgtccca
gggaacctggaggaagaggaatgggtacggccagtcatgaagagggataagcaggttctt
ctgcactggggctactatcctgacagttacgacacatggatcccagccagtgaaattgaa
gcatctgtggaagatgccccaactcctgagaaacctaggaaggttcatgcaaagtggatc
ctggacacagacaccttcaatgaatggatgaatgaggaagactatgaagtaaatgatgac
aaaaaccctgtctcccggcgaaagaagatttcagccaagacactgacggatgaggtgaac
agcccagattcggatcgacgggacaagaaggggggcaactataagaagaggaagcgctcc
ccatccccttcaccgaccccagaagctaagaagaagaatgctaagaaaggtccctcaaca
ccttacaccaagtcaaagcgtggccacagagaagaggagcaagaagacctgacaaaggac
atggatgagccctcaccggtccccaatgtggaagaggtgacattgcccaagacagtcaat
actaagaaggactcggagtcagccccggtcaaaggaggcaccatgactgacctggatgaa
caagaagatgaaagcatggagaccacgggcaaggatgaggatgagaacagcacggggaac
aagggggagcagaccaagaatccggacctgcatgaggacaacgtgaccgaacagacccat
cacatcatcatcccaagctatgctgcctggtttgactataatagtgttcatgccatagag
cggagggctctccctgagttcttcaacggcaagaacaagtccaagactccagaaatctac
ctggcctatcgaaacttcatgatcgacacttaccggctgaacccccaagagtatctcacg
tccaccgcctgccgcaggaacctggcgggtgatgtctgtgccatcatgagagtccatgcc
ttcctagaacagtggggtcttattaactaccaggtggatgctgagagtcgaccaacacca
atggggcctccgcccacctcgcatttccacgtcttggcggacacaccgtctggactggtg
cctctgcagcccaagaccccgcagggccgccaggttgatgctgataccaaggctgggcga
aagggcaaagagctggatgacttggtgccagagacggctaagggcaagccagagctgcag
acctctgcttcccagcaaatgctcaacttccctgataaaggcaaggagaaaccgacagac
atgcagaactttgggctgcgcacagacatgtacacaaagaagaacgtcccctccaagagc
aaagctgcggccagtgccacgcgagagtggacagaacaggagaccctgctactcctggag
gcactggaaatgtacaaagatgactggaacaaagtatcggagcacgtgggaagccgcaca
caggacgaatgcatcttgcattttcttcggcttcccattgaagacccgtacctggaggac
tcagaggcctccctgggccccctggcctaccagcccatccccttcagccagtcaggcaac
cctgtgatgagcaccgttgccttcctggcctctgtcgttgaccctcgagtggcctctgct
gctgcgaagtcagccctagaagagttctccaaaatgaaggaagaggtacccacagccttg
gtggaggcccacgttcggaaagtggaagaagcagccaaagtgacaggcaaagcagaccca
gcctttggtctggaaagcagtggcattgcaggaaccacctctgatgaacctgagcggatt
gaggagagcgggactgacgaggcgcgggcggagggccaggccacagaggagaagaaggag
cccaaggaaccacgagaaggagttggggctatagaggaagaagcaaaagagaagaccagt
gaggcacccaagaaggatgacgagaaagggaaagacggcgacagcgagaaggagtcagag
aagagtgacggggacccgatagttgatcctgagaaggagaaggagcccaaggaagggcag
gaggaagtgctgaaggaagtggtggagtcggagggggaaaggaagacgaaggtggagcgt
gacatcggcgagggcaacctctccaccgctgcggccgctgccctggctgccgctgccgtg
aaggccaagcacttggctgccgttgaggagaggaagatcaaatctctggtggccctgctg
gtggagacccagatgaaaaagttggaaatcaaactccggcactttgaggagctagagacg
atcatggaccgggagcgagaagcactagagtatcagaggcagcagctcctggccgacaga
caagccttccacatggagcagctgaagtacgcggagatgagggcccggcagcagcacttc
cagcaaatgcaccaacagcagcagccgcccccgcaaaccctgccccctggctcccagcct
gtcccacctgcgggtgctgctgggccacccgccgtccacggcttggctctggctccagcc
tccgtggcccctgcctctgcgggcagtggggcccctcccggaagcttgggcccctctgaa
cagattgggcaggcagggtcaactgcagtgccacagcagcaacaagcagctggagccccc
cagcctggggcagtcccaccaggggtacccccccctggaccccacggcccctcaccgttc
cccaaccaacaaactcctccctcaatgatgccaggggcagtgccaggcagcgggcaccca
ggcgtggcggcccagagccctgccattgtggcagctgttcagggcaacctcctgcccagt
gccagcccactgccagacccaggcgcccccctgcctccagaccccacggccccgagccca
ggcacagtcacccctgtgccgcccacacagtga
DBGET
integrated database retrieval system
