Balaenoptera acutorostrata scammoni (minke whale): 103014535
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Entry
103014535 CDS
T03086
Symbol
DDX60
Name
(RefSeq) DExD/H-box helicase 60
KO
K20103
ATP-dependent RNA helicase DDX60 [EC:
5.6.2.7
]
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bacu03019
]
103014535 (DDX60)
Enzymes [BR:
bacu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103014535 (DDX60)
Messenger RNA biogenesis [BR:
bacu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
103014535 (DDX60)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIN-like_DDX60
DEAD
ResIII
Helicase_C
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
103014535
NCBI-ProteinID:
XP_007192717
LinkDB
All DBs
Position
Un
AA seq
1712 aa
AA seq
DB search
MGLEKYRMLLERMSQLILDQMAKADYDSLFNDFVESEFFLIDGDSLLMTYVCEKSLRPEQ
GLHFFYLVERYLVDLISKGGQFAVVFFKDAEHAYNNIPDFLPLRMALILHLQHNTDIDVR
TDFSGCFSQEWKTFLEDSYPYFLIVADESLSHLQVHLFNFLIIQSWAMKVNAVLFSGQAS
DVLRLYAYFMPSKYRNRMFFQKNEKNIENAYKTLIKQLEECRDLALGPLFGNLKWKNMME
EACETISLLKQLWPEGSDIRQVLCVTSCSLSLSLYRHFLENRSKTTDAQKANIQQAERNC
PTLEGVTDWCRLHCLSVAFLLHLPLSQRACTRFITSHWIKDLQTFLTMKKWCEYFILSNI
DVFESWNLNLTHLSDLSDELLLKNIAFYYENESVQGLHLNLGNVIMKDYEHLWDTVSKLV
TKFDVGKPFPLRTKQFPFLKKDPSPIKDTSKEKMANLGFIPVSCQVVDKFAGDILKDLPF
LTSDDPIVTSLVKQKEFDELVHWHSHKPLSDDYDRTKGHFDEKPRDPLHLRYLQMYHRFQ
RFYGESLESVSSKFVVPQAIKPKKNFCEPKSKKIQETKAEKITRENKERLFAKEEQKEEK
KWNVLSFSIEEEMKENLNSGIKNLEDFLKSCKSSSVKFRVEMVGITACLRAWKEHCRGEG
ETTKDLSIAVQMMKRIYSVMEKYAELLQEADRQLIARCLSYLGFEELASSLRPTQVTGND
IKEKKKNKYSVGIGPARFLLQYMGHYLVRDERKDPDPRVQDFIPDTWQRELLDVVDKNES
AVIVAPTSSGKTYASYYCMEKVLRESDNGVVVYVAPTKALVNQVAATVENRFNKNLPNGE
SLCGVFTRDYRHEALNSQVLITVPACFEILLLAPHRQAWVKRIRYVIFDEVHCLGGEIGA
EVWEHLLVMIRCPFLALSATISNPEHLTEWLQSVKRYWQQTESTMEKNIASSRNAGCRAS
SHQDYLLMKQSYKVRLVLYAERYNDLEKHICSVNNHDISFDHFHPCAALTTDHIEKFGFP
SDLTLSPREMIQLYDTMFEFWESWPRAQELCPEEFVHFKNKIVIRKTDARKYEESLKAEL
TGWVRSGHVKEARMVLRNLRPPVVSSENMTVMFPFLVEKLRQMEKLPALFFLFNLGDVEK
SAESVKTFLEIKQQSRRPLKADKEAYDMENKLRKLRKSLETQKTIDKRSQKNPRKMDQSL
IRGAEHDNLLKSLEKNLEIPQDCTYADQKAIDAETLQRVFDRVKFSRKGAKLKALAARGI
GYHHSSLSAKEKQLVEILFRKGFIRVVTATGTLALGINMPCKSVVFVQNSVYLDALNYRQ
MSGRAGRRGQDLGGDVYFFDIPLPKIEKLIKSNVPELRGQFPLSISLVLRLMLLASKGDD
PEDAKAKVLSVLKHSLLSFKQPRALEMLKLYFLFSLQFLVKEGYLDQEGNPTGFAGLVSH
LHYHEPSNLVFVSFLVRGLFHNLCQPTREGSKHFSQDVMEKLVLVLANLFGRKYLPAKFQ
DATTLKFYQSKVFLEDLPEDFKAALDEYNTNVTKDFASFLLIVSKLADMKQEHQLPLSKI
DFSGKECEDSQLVSHLMSCKEGRVAISPFACLSGNSDGNLLHLETSDHVTLRTIGIDSTR
APVLWPRGFDLQGRRMQLNAYALDFYKHGSLTGLVQDNRMNEGAAYQLLKDFGLTIKSIS
VSLHELCENEEDNVVLAFEQLSETFFEKFNNI
NT seq
5139 nt
NT seq
+upstream
nt +downstream
nt
atgggtttagaaaagtaccggatgcttttagagagaatgtcacagttgattttggatcaa
atggcaaaagctgattatgacagtctgttcaatgattttgttgagtctgagttttttctg
attgatggagactcactgctgatgacatacgtctgtgagaaatccttgcggcctgaacag
ggcctgcacttcttctacctggttgaacgctaccttgtggatctaattagtaaaggagga
cagtttgccgtcgttttcttcaaggacgctgagcatgcgtacaacaacatccctgatttt
cttcctctgagaatggcattaattctccaccttcagcataataccgacattgatgttcgg
acagacttttctgggtgcttctcacaagagtggaaaactttcttggaagacagttaccca
tattttctgatcgttgccgatgaaagcctgagccatctacaagtacaccttttcaacttt
ttaatcattcagtcctgggcaatgaaggtcaatgctgtgctcttctcgggccaagcatcc
gatgtccttcgactttacgcgtactttatgccgagcaagtacagaaaccggatgtttttc
cagaagaatgaaaagaacattgagaatgcttataaaaccctgattaagcaattggaggaa
tgtagagatttagcattaggacctctttttggaaatttaaaatggaaaaatatgatggaa
gaggcatgtgaaactatttctctgcttaagcaactgtggccggaaggatctgacattcgg
caagttctttgtgttacttcgtgctccttgtctttgagtttataccgtcactttttagaa
aacagatcgaagaccaccgatgctcagaaagctaacatccaacaggcggagaggaactgc
cccaccctggagggggtgacagattggtgtaggctgcactgtctcagcgtggcgtttctc
ctccacttacctctttcccaaagagcatgtaccagattcatcacctcccactggattaag
gaccttcagactttcttaacaatgaaaaagtggtgtgaatacttcatcctaagtaatata
gacgtttttgaatcttggaatctgaatttaactcacctttccgacttaagtgatgagctt
ttattgaagaatatagcattttactatgaaaatgaaagtgttcaagggctacatttgaat
ttgggaaatgtcattatgaaagattatgaacatctctgggatactgtatcaaagttggtc
acaaagtttgatgttggaaagccatttcctctgagaacaaaacaatttccttttcttaaa
aaggatccatcaccaatcaaagatacctccaaggaaaagatggctaatttgggttttatt
ccagtgtcatgtcaggtggttgataagtttgctggggacattttgaaagatttgcctttc
ctaacgagcgatgatcctattgtaacttcactggtcaagcagaaagaatttgatgagctc
gtgcactggcattcccacaaaccccttagtgatgattatgacaggacaaagggtcacttt
gatgaaaaacctagagatcctcttcatcttagatatttgcaaatgtatcatcgttttcaa
cgattttatggggagtcattagaatcagtctcttcaaaatttgttgtacctcaagctatc
aagccaaagaagaatttctgtgaacccaagagcaaaaagatacaggagaccaaggctgaa
aaaattactagagagaataaggagaggctatttgccaaggaagaacaaaaagaagagaaa
aaatggaatgttctgtccttttctattgaggaggaaatgaaagagaatttaaactctgga
ataaagaacctagaagattttttgaaatcatgtaaaagtagctcagtgaaatttcgagtt
gaaatggtggggattactgcctgcttgagagcgtggaaagaacattgccgtggtgaaggt
gaaaccacaaaagatttaagtatagctgttcaaatgatgaaaaggatctactccgtgatg
gaaaaatacgcagaacttttgcaagaggcagatcggcaactcatagccagatgccttagc
tatttaggatttgaggagttggcaagttctttgcgtccaacgcaggtcacaggaaatgac
ataaaggagaagaaaaagaacaaatactcagttggcattgggccagctcggtttctgctg
cagtacatgggccactatttggtacgagatgagaggaaagatccagaccccagagtccag
gactttattcctgacacctggcagcgagagctcttggacgtcgtagacaagaacgagtct
gcggtcatagtggcccccacgtcctcagggaagacctatgcctcctactactgcatggag
aaggtgctacgggagagtgacaatggggtggtcgtgtacgtggcccccaccaaggccctt
gtcaatcaagtggcagcaactgttgagaatcgttttaacaaaaatctgccaaatggtgaa
agtctgtgtggtgtttttacacgggactaccgtcatgaggcgctcaactctcaggtactt
atcacagtgccggcctgctttgaaattctgctgctagctccacatcgccaggcgtgggtg
aagaggatcagatacgttatatttgatgaggtccactgtcttggtggagaaattggagca
gaagtctgggagcatctccttgtcatgatccgctgtccgttcctggccctttctgctacc
atcagcaacccggagcatctcactgagtggctacaatccgtaaaacggtactggcaacaa
acagagagtacgatggaaaaaaatattgcttcttcaagaaatgccggctgccgcgccagt
tctcaccaagactacttactgatgaagcagtcgtataaagtgagacttgtgctctatgca
gagagatacaatgatttagagaagcacatatgttcggtaaacaatcatgacatttccttt
gaccattttcacccgtgcgctgcgctgaccacggaccatattgaaaagtttggattccct
tctgacctgaccctttcacctcgagaaatgatccagctttatgataccatgtttgaattc
tgggaaagctggcccagggctcaggagttgtgtccggaggaattcgttcattttaagaat
aaaatagtcattcgaaagacggatgctagaaagtatgaagagagcttaaaggcagaactg
acaggctgggtgaggagcggtcacgtcaaggaggccagaatggtcctgaggaatcttcgt
cctccggttgttagttcagaaaacatgacagttatgtttccatttctcgttgaaaagcta
aggcaaatggagaagttacctgcactgttttttttatttaacttaggggatgtagagaaa
agcgctgaaagtgtgaaaacgttcctagagataaagcaacagagcaggaggcccctcaag
gctgataaggaggcctatgacatggagaacaaacttcgaaaacttagaaaatcccttgag
acacagaagaccatagataaaagaagccagaaaaatcccagaaaaatggatcaaagccta
atccgtggagctgaacatgataatctcctcaagagtctcgagaagaacttggagatccct
caggactgcacatatgctgatcagaaggccatagacgctgagactttgcagagggtgttt
gaccgagtgaaattctcaaggaaaggcgccaaactgaaggctttggcagcaagggggatt
ggatatcatcacagctctttgagcgccaaagaaaagcagttagttgagattctttttagg
aaaggatttattagggtggtgaccgctacagggacacttgctttaggaatcaacatgcct
tgtaaatctgtggtttttgttcaaaactcagtctatctggatgctttaaactacagacag
atgtctggacgggccggacgacgaggtcaagacctgggaggagatgtgtatttctttgat
attccactccctaaaatcgaaaagctcatcaaatccaacgtccctgaactgcgagggcag
ttccctctcagcatatccctggtcctgagactcatgcttctggcttccaagggagatgac
cctgaggatgctaaggcaaaggtgctgtccgtgctcaagcactcactgctctccttcaag
cagcctcgggcgctggagatgctgaaactgtactttctgttctccctgcaattcctggtc
aaggagggctatttagatcaagaaggtaatcctacaggctttgctggacttgtgtcacat
ttgcattatcacgagccttctaatcttgttttcgtcagttttcttgtaagaggccttttc
cataatctctgtcagccaaccagagaaggctcaaaacatttttctcaggatgttatggaa
aagctagtgttagtattggcaaatctgtttggaagaaaatatcttccagcaaagttccaa
gatgctactacgctcaagttttatcaatccaaggtgtttctggaggatctccctgaggac
ttcaaggctgctctagatgagtataacacaaacgtgacaaaggactttgcctctttccta
ctgattgtttccaaactggctgatatgaaacaagaacatcagctcccattgtcaaaaata
gatttctcaggtaaagagtgtgaagactcccaacttgtgtctcacttgatgagctgcaag
gaaggaagagtagccatttctccgtttgcctgtctctctgggaactctgatggcaatttg
cttcatctagaaacttcagaccatgtcactctgcgcaccatcggcattgatagcactcgg
gctcctgtgctgtggccacggggatttgatctccaaggaagaagaatgcagctcaatgct
tacgcactcgacttctataaacacggttccttgacaggattggtccaggacaacaggatg
aatgaaggagctgcttatcagttgttgaaagattttgggctcaccattaaatctatcagt
gtttctttgcatgaactatgtgaaaatgaagaggacaacgtggtcttagcatttgaacaa
ctgagtgaaaccttttttgaaaaatttaataacatttga
DBGET
integrated database retrieval system
