Balaenoptera acutorostrata scammoni (minke whale): 103014649
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Entry
103014649 CDS
T03086
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA decapping 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103014649 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bacu03019
]
103014649 (EDC4)
Messenger RNA biogenesis [BR:
bacu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103014649 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
103014649 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
DUF445
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_HPS5
WDR55
Motif
Other DBs
NCBI-GeneID:
103014649
NCBI-ProteinID:
XP_007198204
UniProt:
A0A452C6R0
LinkDB
All DBs
Position
Un
AA seq
1396 aa
AA seq
DB search
MASSCASIDIEDATQHLRDILKLDRPAGGPSAESQRPSNAYNGDLNGLLVPDPLCSGDGT
STNKPGLRAMPPINLQEKQVICLLGDDSSTCIGILAKEVEIVASSDSSISSKARGSNKVK
IQPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFTGSV
ADLAFAHLNSPQLACLDEAGNLFVWRLALVNGKIQEEILVHIRQPEGTPLNHFRRIIWCP
FIPEESEDCCEEGSPTVALLHEDRAEVWDLDMLRSNHSTWPVDVSQIKQGFIVVKGHSTC
LSEGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKK
QDPEVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFSPDIFSSVSVPPSLKVCLDLSAE
YLILSDVQRKVLYVMELLQNQEEGRACFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLP
AEEENDSLGADGTHGVGAMESAAGVLIKLFCVHTKALQDVQIRFQPQLNPDVVAPLPTHP
AHEDFAFGESRPELASEGLGSATHGSQPDLRRIVELPAPADFLSLSSETKPKLMTPDAFM
TPSTSLQQIAASPSSSSSSSSSSSLTAVSAMSSTSAVDPSLPRPPEELTLSPKLQLDGGL
TMSSSSSLQASPRSLLPGLLPSPADKLPPKGPGQVPTAASTLSLELQEVEPLGLPQASPS
RTRSPDVISSASTALSQDIPEIASEALSRGFGSSAPEGLEPDSMASAASALHLLSPRPRP
GPELGPQLSLDGGPGDGDRHSTPSLLEAALTQEATAPDSQVWPTAPDITRETCSSLAESP
RNGLQEKHKSLAFHRPPYHLLQQHDSQDASAEQSDHDDEVASLASAAGGFGTRVPTPRLP
AKDWKTKGSPRASPKLKRKGKKDDGNSSVGSRLTEHQVAEGPEDWPALIWQQQRELAQLR
HSQEELLQRLCTQLEGLQSTVTGHVERALESRHEQEQRRLERALAEGQQRGGQLQEQLTQ
QLSQALSSAVAGRLERSIRDEIKKTVPPCVSRSLEPVAGQLSNSVATKLTAVEGSMKENI
SKLLKSKNLTDAIARAAADTLQGPMQAAYREAFQSVVLPAFEKSCQAMFQQINDSFRLGT
QEYLQQLESHMKSRKAREQEAREPVLAQLRGLVSTLQGATEQMAATVSSSVRAEVQHQLH
VAVGSLQEAILAQVQRIVKGEVSVALKEQQAAVTSSIMQAMRSAAGTPVPATHLDCQAQQ
AHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPGQVFGQPPCPLSQPVLLSLIQQL
ASDLGTRTDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKLFQFLQAEPHNSLGKAA
RRLSLMLHGLMTPSLP
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcctgcgcgagcatcgacatcgaggacgccacgcagcacctgcgggacatc
ctcaagctggaccggcccgcggggggtcccagtgcagagagccagcgaccatctaatgcc
tacaatggagatctcaatgggctcctggtcccagaccccctctgctcaggtgatggtact
tcaacaaacaagcctggtctccgagccatgccacctattaacctgcaggaaaagcaggtc
atctgcctcttaggagacgacagttccacctgcatcgggattttggccaaggaggtggag
attgtggccagcagtgactctagcatctcgagcaaggcacgggggagcaacaaggtgaaa
atccagcccgttgccaagtatgactgggagcagaaatactactatggcaacctgattgct
gtgtccaactctttcttggcctatgctattcgggctgccaacaacggctcagcgatggta
cgggtgatcagtgtcagcacttcagagaggaccctgctcaaaggcttcacaggcagcgtg
gctgatctggcctttgcacacctcaattccccacagctggcctgcctggatgaggcaggc
aacctgtttgtgtggcgcttggccctggttaatggcaaaattcaagaagagatcttggtc
catatccgacagccagagggcactccactgaaccacttccgcaggatcatctggtgcccc
ttcatccccgaagagagtgaggactgctgtgaggagggcagcccaacggtggccctgttg
catgaggaccgggctgaggtatgggacctggacatgctccgctccaaccacagcacctgg
cccgtggatgtcagccagatcaagcagggcttcatcgtggtaaaaggccacagcacatgc
ctaagtgaaggggccctctcacctgatgggactgtcctggctaccgcaagtcatgatggc
ttcgtcaagttctggcagatttacattgaggggcaggatgagccaaggtgtttgcacgag
tggaagcctcacgatgggaggcccctctcctgcctcctgttctgtgacaaccacaagaaa
caggatcctgaggtccctttctggaggttcctcattactggcgctgaccagaatcgggag
ctgaagatgtggtgcacggtgtcctggacctgcctgcagaccattcgcttctccccagat
atcttcagctcagtgagtgtgccccccagcctcaaggtttgcctggacctctcagcagaa
tacctgattctcagcgatgtgcaacggaaggtcctctacgtgatggaactgctgcagaac
caggaggagggccgtgcctgcttcagctccatctctgagttcctgctcacccaccctgtg
ctgagcttcggtatccaggttgtgagtcgctgccggctgcggcacactgaggtgctgcca
gccgaggaggagaatgacagcctaggggctgatgggacccacggagttggtgccatggag
tctgcagccggtgtgctcatcaagctcttttgtgtgcacactaaggcattgcaagatgta
cagatccgtttccaaccacagctgaaccctgacgtggtggccccgctccccacacaccct
gcccatgaggactttgcatttggagagtctcgaccagaactggcttctgagggcctggga
tcggccactcacggctcccagcctgacctccgacgcatcgtggagctgcctgcacctgcc
gacttcctcagtctgagcagtgagaccaagcccaagctgatgacacctgatgccttcatg
acacctagtacctccctgcagcagatcgctgcatctcccagtagcagcagcagcagcagc
agcagttcctctcttacagcggtgtctgccatgagcagtacttcggccgtggacccctct
ttgcccaggccacctgaggagctgaccttgagccccaagctacagctggatggcggtctg
acaatgagcagcagcagcagcctgcaggcaagcccgcgtagcctcctgcctggcctgctc
ccaagtccggccgacaaattgcctcccaaagggcccgggcaggtgcctactgctgcctct
acactatccctggagcttcaggaagtggagcccctggggctaccccaggcttcccccagc
cgcacccgctcccccgatgttatctcctcagcttccactgccctgtcccaggatatccct
gagatcgcatctgaggcgctgtcccgtggctttggctcctctgctcctgagggcctggag
ccggacagtatggcctcagctgcttcagcactacacctgctgtctccacggccccggccg
ggacccgagcttggcccccagcttagcctggatggaggccctggggatggggatcggcat
agtaccccttccctcctggaggcagccttgacccaggaggccacggcccctgacagtcag
gtctggcctacggcaccagacattactcgtgagacctgcagcagcctggcagagagcccc
cggaatggcctccaggaaaagcacaagagcctggcctttcaccgaccaccttatcacctg
ctgcagcaacacgacagtcaggacgccagtgccgagcaaagtgaccacgatgacgaggtg
gccagcctggcctctgctgcagggggctttggcaccagagttcccactccacgtcttcct
gccaaggactggaagaccaaaggatcccctcgggcctcacccaagctcaagcgaaagggc
aaaaaggatgacgggaattcatccgtgggatcccggctcacagagcaccaggtggcagag
ggccctgaggactggccagcactaatttggcaacagcagagagagctggcgcagcttcgg
cacagccaagaagagctgctacagcgtctgtgcacccaacttgaaggcctgcagagcact
gtcacgggccacgtagaacgtgccctagagtcacggcacgagcaggagcagcggcgactg
gagcgggcactggccgagggacagcagcgtggtgggcagctgcaggagcagctgacgcaa
cagctgtcccaagcactatcttcagctgtggctgggcggctggagcgcagcatacgggat
gagatcaagaagacggttcctccatgtgtatctaggagtctggagcccgtggcaggccaa
ctgagcaactcagtggccaccaaactcacagccgtggagggtagcatgaaagagaatatc
tccaagctgctgaagtccaagaacttaacagatgccattgcccgagcagctgcagacacg
ttacaggggccaatgcaggccgcctaccgtgaagccttccagagcgtggtactgcccgcc
ttcgagaagagctgccaggccatgttccagcagatcaatgatagcttccgactgggcacg
caggaatacttgcagcagctggagagccacatgaagagccgaaaggcacgagaacaggag
gcgcgggagcccgtgctggcccagctgcggggcctggtcagcacactgcagggggccact
gagcagatggcggctaccgtgtccagcagcgttcgggctgaggtgcagcaccagctgcac
gtggctgtgggcagcctgcaagaggcaattttagcacaggtgcagcgcattgttaagggt
gaggtgagtgtggcactcaaggagcagcaggctgccgtcacctctagcatcatgcaggcc
atgcgctcagccgctggcacacctgtccctgccacccacctcgactgccaagcccagcaa
gcccatatcctgcagctgctgcagcagggccacctcaatcaggccttccagcaggccctg
acagctgccgacctgaacctggtgctgtacgtgtgtgaaactgtggacccaggccaggtt
tttgggcagccaccttgccccctctcccagcctgtactcctttcactcatccagcaactg
gcctctgaccttggcactcgaactgacctcaagctcagctacctggaagaggctgtgatg
cacctggaccacagtgaccccatcactcgggaccacatgggctctgtcatggcccaggtg
cgccagaagctcttccagttcctgcaggcggagccacacaactcacttggcaaagcggcc
cggcgtctcagcctcatgctgcacggccttatgacccccagcctcccttag
DBGET
integrated database retrieval system
