Balaenoptera acutorostrata scammoni (minke whale): 103014687
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Entry
103014687 CDS
T03086
Symbol
VPS41
Name
(RefSeq) VPS41, HOPS complex subunit
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu04140
Autophagy - animal
bacu04148
Efferocytosis
bacu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103014687 (VPS41)
04148 Efferocytosis
103014687 (VPS41)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
103014687 (VPS41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bacu04131
]
103014687 (VPS41)
Membrane trafficking [BR:
bacu04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
103014687 (VPS41)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40_CDC20-Fz
WD40_Prp19
ANAPC4_WD40
WD40_WDHD1_1st
zf_RING_Vps8_fungal
Beta-prop_HPS5
Beta-prop_EML_2
Beta-prop_RIG_2nd
Vps39_1
zf_RING_Vps8
Frtz
Beta-prop_IFT140_2nd
zf-RING_11
zf-rbx1
CofB_pilin_dom
Motif
Other DBs
NCBI-GeneID:
103014687
NCBI-ProteinID:
XP_007187807
UniProt:
A0A384AKB8
LinkDB
All DBs
Position
Un
AA seq
855 aa
AA seq
DB search
MAEAEEQETGSLEESTDESEEEESEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLAL
GTHYGKVYLLDVQGNITQKFDISPVKINQISLDESGEHMGVCSEDGKVQVFGLYSGEEFH
ETFDCPIKIIAVHPHFVRSSCKQFVTGGKKLLLFERSWMSRWKSSVLHEGEGNIRSVKWR
GHLIAWANNMGVKIFDITSKQRITNVPRDDISLRPDMYPCSLCWKDNVTLIIGWGTSVKI
CSVKERHASEMRDLPSRYVEIVSQFETEFYTSGLAPLCDQLVVLSYVKEVSEKTEREYCA
RPRLDIIQPLSETCEEISSDALTVRGFQENECRDYHLEYSEGESLFYIVSPRDVVVAKER
DQDDHIDWLLEKKKYEEALMAAEISQKNIKRHKILDIGLAYINHLVEKGEYDIAARKCQK
ILGKNAALWEYEVYKFKEIGQLKAISPYLPRGDPVLKPLIYEMILHEFLESDYEGFATLI
REWPGDLYNNSVIVQAVRDHLKKDSQNRTLLKTLAELYTYDKNYGNALEIYLTLRHKDVF
QLIHKHNLFSSIKDKIVLLMDFDSEKAVDMLLDNEDKISITKVVEELEDRPELQHVYLHK
LFKRDHHKGQRYHEKQISLYAEFDRPNLLPFLRDSIHCPLEKALEICQQRNFVAETVYLL
SRMGNSRSALKMIMEELHDVDKAIEFAKEQDDGELWEDLILYSIDKPPFITGLLNNIGTH
VDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMHRTQM
KGILVDEENICESCLSPILPSDAAKPFSAVVFHCRHMFHKECLPMTSMCIFRTFLCSSVT
PAVLSTGDQEVPCWT
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagcggaggagcaggaaaccgggtcgcttgaagaatctacagatgagtctgag
gaagaagagagtgaagaggagcccaaactgaagtatgaaaggctctccaatggggtaact
gaaatccttcagaaggatgccgctagctgcatgacagtccacgataagttcttggcactg
ggcacacattatggcaaggtttatttactggatgtccagggaaacatcactcagaagttt
gatataagtcctgtgaagataaatcagattagcctggatgaaagtggcgaacacatgggc
gtgtgttcagaggatggcaaggtgcaggtgtttggactgtattctggagaagaatttcat
gagacttttgactgtcccattaaaatcattgccgtgcatccgcacttcgtgagatccagc
tgcaagcagtttgtgaccggagggaagaagttgctgctgtttgagcggtcttggatgagc
agatggaagtcttcagttctgcacgaaggagaagggaacataaggagtgtgaagtggagg
ggccatctgattgcctgggccaataatatgggtgtgaagatttttgacatcacctcaaag
caaagaatcaccaatgtgccccgggatgatataagtcttcgccccgatatgtacccctgt
agcctctgctggaaggacaatgtgacactgatcattggctggggcacctctgtcaagata
tgctcggtgaaggaacggcatgccagtgaaatgagggacttgccgagccgatacgttgaa
atagtgtctcagtttgaaactgaattctacaccagtggactggcacctctctgtgaccag
cttgttgtactttcctatgtaaaggaggtttccgaaaaaacggaaagagaatactgcgcc
aggcccagactggatatcatccagccgctttctgagacttgtgaagagatctcttctgat
gccctgactgtgaggggctttcaggaaaatgaatgtagagattatcacttagaatactcg
gaaggggagtcgctcttttacattgtgagtccaagagatgttgtcgtagccaaggaacga
gaccaagatgaccacatcgactggctccttgaaaagaagaaatatgaagaagctctgatg
gcagctgaaattagccaaaagaacattaaaagacataagattctggacatcggcttggca
tatataaaccacctggtggagaaaggagagtacgacatagcggcacgcaaatgccagaaa
attcttgggaaaaatgcagcactctgggaatatgaagtttataaatttaaagaaattgga
cagcttaaggctattagtccttatttgccaagaggggatccagttctgaaaccactcatc
tatgaaatgatcttgcatgaatttttggaaagtgattatgagggttttgccacactgatc
cgagaatggccgggagatctgtacaacaattcagtaatagttcaagcggttcgggatcat
ctgaagaaagacagtcagaacagaacgttacttaaaaccctggcagaactgtacacctat
gacaaaaactacggcaatgctctggaaatatacttaacgttaagacataaggatgttttc
cagttgatccacaagcataatcttttcagttctatcaaggataaaattgttttattaatg
gattttgattctgagaaagctgttgacatgcttctggacaacgaagataaaatttcaatt
acaaaggtagtggaagaattagaagacagaccagagttgcagcacgtgtatctgcataag
cttttcaaaagagaccatcataaggggcagcgctaccacgagaagcagatcagcctttat
gctgaattcgaccgacccaacttgcttccatttctccgagacagtatccactgccccctt
gaaaaggctcttgagatctgtcaacagagaaactttgtagcagagaccgtttatcttctg
agccgaatgggtaatagccgaagtgccctgaagatgatcatggaggaattacatgacgtt
gataaagcaattgaatttgccaaggagcaggatgacggtgaactctgggaagatctgatt
ttatattccatcgacaaaccaccctttatcaccggcttgttaaacaatatcggcacgcat
gttgacccaattctactgattcaccgtattaaggaaggaatggagattcctaatttgaga
gactccttggttaaaattctgcaagactacaatctgcaaattctgcttcgcgaaggctgc
aagaagattctcgtagctgactctttgtccttactaaagaagatgcaccgaactcaaatg
aaaggcattctggttgatgaggagaacatctgtgagtcctgtctttcccctattcttcca
tcagacgcagctaagcccttcagcgcggtggtcttccactgccgccatatgttccacaag
gagtgcctgcctatgaccagcatgtgcattttcagaactttcctgtgcagttctgtaaca
cctgcagtgctaagcaccggggaccaggaagtaccatgttggacatga
DBGET
integrated database retrieval system
