Balaenoptera acutorostrata scammoni (minke whale): 103015988
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Entry
103015988 CDS
T03086
Symbol
NUP88
Name
(RefSeq) nucleoporin 88
KO
K14318
nuclear pore complex protein Nup88
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu03013
Nucleocytoplasmic transport
bacu05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103015988 (NUP88)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
103015988 (NUP88)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bacu03019
]
103015988 (NUP88)
Messenger RNA biogenesis [BR:
bacu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103015988 (NUP88)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup88
DUF659
DUF7344
Motif
Other DBs
NCBI-GeneID:
103015988
NCBI-ProteinID:
XP_007166586
UniProt:
A0A383YUW7
LinkDB
All DBs
Position
Un
AA seq
739 aa
AA seq
DB search
MAVAEGAAGDCELWQAWLPDHAVFLRLQEGRKNQSLAAAEKPASSSLPSPPQLLTRNLVL
GLGGELFLWDGEGSCFLVVRLLDPSGAGEESPLSQYQRLLCINPPLFEVYQVLLSPTQHH
VALIGIKGLMILELPKRWGKNSEFEGGKSTVNCSTTPVAERFFTSSTSLTLKHAAWYPSE
MLDPHIVLLTSDNVIRIYSLREPQTPTKVIVLSEAEEESLILNKGRAYTASLGETAVAFD
FGPLSAVPKNIFGQKGKDEVLAYPLYILYENGETFLTYVSLLHSPGSVGKLLGPLPMHPA
AEDNYGYDACAVLCLPCVPNILVIATESGMLYHCVVLEGEEEDDQTSEKSWDSRADLIPS
LYVFECVELELALKLASGEDEPFDSDFSCPIKLHRDPKCPSRYHCTHEAGVHSVGLTWIH
KLQKFLGSDEEDKDSLQELATEQKCFVEHILCTKPLPCRQPAPIRGFWIIPDILGPTMIC
VTSNYECVVRPLLSTVHPASPPLLCTRDDVEVAQSPLRILAETPDSFEKHIRSILQRSVA
NPAFLKSSEKDTAPPPEECLQLISRATQVFREQYILKQDLAKEEIQRRVKLLCDQKKKQL
EDLNYCREERKSLREMAERLADKYEEAKEKQEDIMTRMKKVLHSFHSQLPVLSDSERDMK
KELQLIPDQLRHLGNAIKQVTMKKDYQQRKMEKVLSPQKPTITLSAYQRKCIQSILKEEG
EHIREMVKQINDIRNHVNF
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgccgaaggagccgcgggggactgtgagctgtggcaggcctggctccctgac
catgccgtgttcttgcggctccaggaaggacggaaaaaccagagcttagccgcagccgag
aagccggcttcttcatcattgccttcgccgccgcagctgctgacgagaaacctggtcttg
ggcctcggcggagagctcttcttatgggacggagaaggcagctgcttcttagtcgtgcgc
cttctggaccccagcggcgccggtgaggagtcccccctctcccagtaccagagattgctt
tgcataaatccacccctgtttgaagtctatcaagtcttgttaagtccaacacaacatcat
gtagcacttataggaataaaaggacttatgatattagaattacctaaaaggtgggggaag
aattctgaatttgaaggtggaaaatcaacagtgaattgtagcaccactcccgttgctgag
agatttttcaccagttctacctctctgactctaaagcatgctgcctggtatccgagtgag
atgctggacccccacatagtgctgttaacatcagacaacgtaataagaatttactctcta
cgtgagccccagacacccactaaggtcattgtactttcagaagcagaagaggaaagtctg
atactcaataaaggaagggcctacaccgcatctctaggagagacagcagttgcatttgac
tttgggccgttgtcggcagtcccgaagaacatatttggacaaaaaggcaaagatgaagta
ttggcttaccccctgtacatcttatatgagaatggggagactttccttacatatgttagt
ctgctgcacagccctgggagtgtgggaaagctgttaggcccattgcccatgcatcctgca
gctgaagataactatggttatgatgcttgtgctgtactctgcttaccatgtgtccccaac
atcttggtgattgctactgaatcaggaatgctgtatcactgtgttgtgctggaaggggaa
gaagaagatgaccaaacatcagaaaagtcctgggattccagggcagatctcattccttct
ctgtatgtgtttgagtgtgtggagttggagcttgccctgaaactggcatccggagaggac
gagccctttgattctgacttttcttgtccaatcaaacttcacagagatcccaagtgtccc
tcaagatatcactgtactcatgaagctggtgtacatagtgttgggctaacttggattcat
aaacttcagaaatttcttggatcagacgaagaagataaggacagtttacaggaactagct
acagaacagaaatgctttgtagaacacattctttgtacgaagccattgccatgcaggcag
ccggctccgattcgaggattctggattatccctgacatcctggggcctacgatgatctgc
gtcaccagtaactacgaatgtgtcgtaaggcctctactaagcacagtccatccagcgtct
cctcccctgctttgtacccgagacgatgttgaagtggcacagtctccgctccgtattctg
gctgaaaccccggattcctttgaaaaacatattagaagcattctgcaacgtagtgttgca
aatccagcatttttgaaatcatctgaaaaagatacggctcctcctcccgaagaatgcctt
cagctcatcagcagagccacccaggtgttcagagaacagtacattcttaaacaggacctg
gcaaaggaggagattcagcggagggtcaaattgttatgtgaccaaaaaaagaaacaacta
gaagatctcaattattgtcgagaggagaggaaaagtctgcgggaaatggccgagcgctta
gctgacaaatatgaggaagccaaggagaaacaagaagatatcatgaccaggatgaaaaaa
gtacttcacagttttcactctcagctcccagttctctctgacagtgagagagacatgaag
aaagaattacagctgatacctgatcaacttcgacatttgggcaacgccatcaaacaggtt
actatgaaaaaagactatcaacaacgaaagatggaaaaggtactaagtcctcaaaagccc
accattactctcagcgcctaccagcgaaaatgcattcagtccatcctgaaggaggagggt
gagcacataagagaaatggtgaagcaaattaacgatatccgaaatcacgtaaacttctga
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integrated database retrieval system
