Balaenoptera acutorostrata scammoni (minke whale): 103016075
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Entry
103016075 CDS
T03086
Symbol
ARID1B
Name
(RefSeq) AT rich interactive domain 1B (SWI1-like)
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu03082
ATP-dependent chromatin remodeling
bacu04714
Thermogenesis
bacu05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103016075 (ARID1B)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
103016075 (ARID1B)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
103016075 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bacu03000
]
103016075 (ARID1B)
03021 Transcription machinery [BR:
bacu03021
]
103016075 (ARID1B)
03036 Chromosome and associated proteins [BR:
bacu03036
]
103016075 (ARID1B)
Transcription factors [BR:
bacu03000
]
Eukaryotic type
Helix-turn-helix
ARID
103016075 (ARID1B)
Transcription machinery [BR:
bacu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103016075 (ARID1B)
Chromosome and associated proteins [BR:
bacu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103016075 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
103016075
NCBI-ProteinID:
XP_007186185
UniProt:
A0A384AFT2
LinkDB
All DBs
Position
Un
AA seq
1769 aa
AA seq
DB search
MDPMVMKRPQLYGMGSNPHSQPQQSNPYPAGSYGPPGPQRYPIGIQGRTPGAMGGMQYAQ
QQVPPQYGQPGVSGYCQQGQPPYYSQQPQAQYLPSQPQQRYQPQQDMSQEGYGTRSQPPL
APGKPNHEDLNLIQQERPSSLPVEVLTSEDTAFGLKDLSGSIDDLPTGTEATLSSAVSAS
GSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQ
MPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMSQYGPQQTGPSMSPHPSPGGQ
MHPGISSFQQSNSSGTYGPQMSQYGPQGNYSRAPTYSGVPSASYSGPGPGMGINANSQMH
GQGPSQPCGAMPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQ
EAAAAVMQAAANSAQSRPPYIRSPAYPSQSGAGGRPMFSSQHPNYGNSQAPMMNQPDQYG
QGGFPGMNQSGLMASSSPYSQPMNNSSGLMNTQAPPYSLTPNMVNSSTASMGLADMMSPG
ESKLPLPLKADGKEEGTAQPESKSKKSSSSTTTGEKITKVYELGNEPERKLWVDRYLTFM
EERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASS
LKKQYIQYLFAFECKTERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQSTGS
NSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTVSVHDPFSDASDSSFPKRNSMTPSAPY
QQGMSMPEVMGRMPYEPNKDPFGGMRKVPGSSEPFLTQGQMPTSSMQDMYNQSPSGAMSS
LGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQTNYKRHMDGMY
GPPAKRHEGDMYNMQYGNQQQEMYNQYGSSYSGPDRRPIQGQYPYPYTRERMQGPGQIQA
HGIPPQMMGGPMQSSSSEGPQQSMWATRNDMPYPYQSRQGPGGPAQTPPYPGMNRTDDMM
VPDQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQTSYQTPPSLPNHISRAPSPASFQ
RSLESRMSPSKSPFLPSMKMQKVMPTVPTAQVTGPPPQPPPIRREITFPPGSVEASQPVL
KQRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFL
ELLVEYFRKCLIDIFGILMEYEVGDPSQKALDHNVVKRDDSQSSADDSGKEEEDAECIDE
EEDEEEDEEEDGGKAEIEDRSSTALASPDATADPKEKPRQASKFDKLPIKIVKKNNLFVV
DRSDKLGRVQEFSSGLLHWQLGGGDTTEHIQTHFESKTEIPPRRRPPPPLSSTGRKKEQE
GKGDSEEQQEKSIIATIDDVLSARPGALPEDTNPGAQTESSKFPFGIHQAKSHRNIKLLE
DEPRSRDEAPLCTVAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKLIL
LHHEHPERKRAPQTYEKEEDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAY
TESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLIL
ATPPFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIGNLI
SFLEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEG
RLLDISISAVLNSLVASVICDVLFQIGQL
NT seq
5310 nt
NT seq
+upstream
nt +downstream
nt
atggatcccatggtgatgaagagacctcagctgtatgggatgggcagtaaccctcattct
cagccacagcagagcaacccttacccggcaggttcctacggccccccaggcccacagcgg
tatccaattggcattcaaggtcggaccccaggggccatgggaggaatgcagtacgcacag
cagcaggtgccgcctcagtatggccagccaggtgtgagcggttactgccagcagggccag
ccgccttactacagccagcagccgcaggcgcagtatctgccgtcccagccccagcagagg
taccagccgcagcaggatatgtctcaggaaggctatggaactaggtctcaacctcctctg
gctcctggaaaacctaaccatgaagacttgaacttaatacaacaagaaagaccatcaagt
ttaccagttgaagtcttgacctcggaggatactgcctttggactcaaggacctgtctggc
tccattgatgacctccccacgggaacggaagcaactttgagctcagcagtgagtgcatcc
gggtccacgagcagccaaggggatcagagcaacccagctcagtcgcctttctctccacac
gcatctccccatctctccagcatccctgggggcccatcgccttctcctgtcggctctcct
gtaggaagcaaccagtcacgatctggcccaatttctcctgcaagtattccaggcagtcag
atgcctcctcagccacctgggagccagtcagaatccagttctcatcctgccttgagccag
tcaccaatgccacaggaaagaggttttatggcaggcacacaaagaaaccctcagatgtct
caatatggacctcaacagacaggaccatccatgtcgcctcatccttctcctggaggccag
atgcatcctggcatcagtagctttcagcagagtaactcaagtgggacttacggtccacag
atgagccagtatggaccacaaggtaactactccagagccccaacatatagtggggtgccc
agtgcaagctacagcggcccagggcccggcatgggcatcaatgccaacagccagatgcat
ggacaagggccaagccagccgtgtggtgctatgcccctgggacgaatgccatcagctggg
atgcagaacagaccctttcctggaaatatgagcagcatgacccctagttctcctggcatg
tctcagcagggagggccaggaatggggccaccaatgccaaccgtgaaccgtaaggcacag
gaggcagctgccgcagtgatgcaggccgctgcgaactcggcacaaagcaggccaccatac
attaggtcgcctgcttatcccagccagtctggggctggcggacgccccatgttttcttcc
cagcaccccaactatggcaactctcaggctcccatgatgaaccagcctgaccagtacggg
caaggcggctttcccggcatgaatcagagtggactcatggcttccagctctccctacagc
cagcccatgaacaacagctctgggctgatgaacacccaagcgcccccctacagcctgacg
cccaacatggtgaacagctcgacagcatctatgggtcttgcagatatgatgtctcctggt
gaatccaaactgcccctgcctctcaaagcagatggtaaagaagaaggcactgcacagccg
gagagcaagtcgaagaagtccagctcatccaccaccactggggaaaagatcacaaaggtg
tatgaattggggaatgagccagagagaaagctgtgggtagaccgatacctcaccttcatg
gaggagagaggctccccggtctcaagtctgcctgcggtgggcaagaagcccttggacctg
ttccgactctatgtctgcgttaaagagattggaggtttggcacaggttaataaaaacaag
aagtggcgtgagctggcaaccaacctaaatgttggtacttcaagcagtgcagcgagctcc
ctgaaaaagcagtatattcagtacctgtttgcctttgagtgcaagactgagcgaggggag
gagcccccgccggaagtcttcagcacgggagacaccaagaagcagcccaagctccagccg
ccctctcctgctaactcaggatccttgcaaggtccacagactccccagtcaactggcagt
aattccatggcagaggttccaggtgacctgaagccacctactccggcctccacccctcat
ggacagatgaccccaatgcaaggtggaagaagcagtacagtcagtgtgcacgacccattc
tcagacgcaagtgattcatcgttcccaaaacgcaactccatgactccgagcgccccatac
cagcagggcatgagcatgccagaagtgatgggcaggatgccctacgagcccaacaaggac
cccttcggaggaatgaggaaagtgcctggcagtagtgagccgttcctgacgcaaggacag
atgcccaccagcagcatgcaggacatgtataaccagagcccgtctggagcgatgtccagt
ctaggcatggggcagcggcagcagtttccctatggagccagttacgatcgaaggcatgaa
ccttacgggcagcagtacccaggccaaggccctccctcaggacagccgccatacggagga
caccagccgggcctgtatccacagcagacgaattacaagcgccatatggatggcatgtac
gggcctccagccaaacgccacgagggagacatgtacaacatgcagtatggcaaccagcag
caagagatgtataaccagtacggaagctcctactccgggcctgacaggaggcccatccag
gggcagtacccgtacccctataccagagagaggatgcaaggcccggggcagatacaggcg
cacggcatcccgcctcagatgatgggcggcccgatgcagtcgtcctccagcgaagggcct
cagcagagtatgtgggcgacacgcaacgatatgccttatccctaccagagcaggcaaggc
cccggcggccctgcacagacacctccttacccaggcatgaaccgcacggacgacatgatg
gtacctgatcaaaggataaaccacgagagccagtggccttctcacgtcagccagcgtcag
ccttacatgtcctcttcagcctccatgcagcccatcacgcgcccgcctcagacatcctac
cagacgccaccgtcgctgccaaatcacatctccagggcgcccagccccgcctccttccag
cgctccctggagagccgcatgtctcccagcaagtcccccttcctgccctccatgaagatg
cagaaggtcatgcccaccgtccccacggcccaggtcacggggccgcccccccagccgccc
ccaatcagaagggagattacctttcctcctggctctgtggaagcatcacagcccgtcttg
aaacaaaggcggaagattacctcaaaagatatcgttactcctgaggcctggcgtgtgatg
atgtcccttaagtcaggtcttctggctgaaagtacttgggctttggacactattaatatt
cttctatatgatgacagcactgtcgctactttcaatctctcccagttgtccggatttctc
gaacttttagtagagtactttaggaaatgcctgattgacatttttgggattcttatggaa
tatgaagtgggagaccccagccaaaaagcacttgatcacaatgtggtaaagagagatgac
agccagtcctcggccgacgattccgggaaagaggaagaagatgcggaatgtattgatgag
gaggaggacgaggaggaagacgaggaggaagacggtgggaaggcggagattgaggacagg
agcagcacggctttggcctcccccgatgccaccgcggatccaaaggagaagcccaggcaa
gccagtaagttcgacaagctgccaatcaagatagtcaaaaagaacaacctgtttgtcgtc
gaccggtctgacaagctgggtcgtgtgcaggagttcagcagtggacttctgcactggcag
ctcggcggtggggacaccaccgagcacatccagacgcactttgagagcaagacggaaatc
cctcctcgcaggcgtccacctccccctttaagctccacaggcagaaagaaagagcaggaa
ggcaaaggggattctgaagagcagcaagagaagagcatcattgcaaccattgatgatgtc
ctgtctgctcggccaggggctcttcctgaagacacaaaccctggtgcccaaaccgaaagc
agtaagtttccctttggaatccatcaagccaaaagccaccgcaacatcaagctgctggag
gacgagccgaggagccgggacgaggctccgctctgcaccgtcgcgcactggcaggactcg
ctggctaagcgctgcatctgcgtgtccaacatcgtccggagcttgtcctttgtgcctggg
aatgacgccgaaatgtccaaacatccaggcttggtgctgatcctggggaagctgattctt
cttcaccacgagcatcccgagagaaaacgagcgccgcagacctacgagaaggaggaagac
gaggacaaaggggtggcctgcagcaaagatgagtggtggtgggactgcctcgaggtctta
agggataacacgttggtcaccttggccaacatttctgggcagctagacttgtctgcttac
acggaaagcatctgcttgccaatactggatggcttgctgcactggatggtgtgcccgtca
gcagaggcacaagacccctttcccactgtgggacccaactctgtcctgtcgcctcagaga
cttgtgctggagacgctctgtaaactcagcatccaggacaacaatgtggacctgatcttg
gctacgcctccgtttagtcgtcaggagaaattctatgccacgttagttaggtacgttggg
gatcgcaaaaacccagtctgtcgagaaatgtccatggcgcttttatcgaaccttgcccaa
ggggacgcgctggctgcaagggcaatagctgtgcagaaaggaagcatcgggaacttgata
agcttcctagaggatggggtcacgatggcccagtatcagcagagccagcataacctcatg
cacatgcagcccccgcctctagagccccctagcgtggacatgatgtgcagggcggccaag
gctctgctggccatggccagagtggacgagaaccgctcagagttccttctgcacgagggt
cgattgctggatatctcgatatcagccgtcctgaactctctggttgcgtctgtcatctgt
gatgtactgtttcagattgggcagttatga
DBGET
integrated database retrieval system
