Balaenoptera acutorostrata scammoni (minke whale): 103016467
Help
Entry
103016467 CDS
T03086
Symbol
XAB2
Name
(RefSeq) XPA binding protein 2
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103016467 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bacu03019
]
103016467 (XAB2)
03041 Spliceosome [BR:
bacu03041
]
103016467 (XAB2)
Messenger RNA biogenesis [BR:
bacu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
103016467 (XAB2)
Spliceosome [BR:
bacu03041
]
Complex B
Other components
Prp19-related factors
103016467 (XAB2)
Complex C
103016467 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
TPR_12
TPR_2
TPR_8
Suf
TPR_19
ARM_TT21
TPR_15
ARM_TT21_C
TPR_1
TPR_NPHP3
DHR-2_Lobe_A
Motif
Other DBs
NCBI-GeneID:
103016467
NCBI-ProteinID:
XP_007169130
UniProt:
A0A383Z1V2
LinkDB
All DBs
Position
Un
AA seq
853 aa
AA seq
DB search
MVVMARLSRPERPDLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA
LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL
MDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESA
EEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLSV
DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA
QFEESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEW
HKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEK
ATKVSFKQVDDLASVWCECGELELRHENYDQALRLLRKATALPARRAEYFDGSEPVQNRV
YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKA
YERGISLFKWPNVSDIWSTYLTKFIARYGGQKLERARDLFEQALDGCPPKYAKTLYLLYA
QLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRSIYQKAIEVLS
DEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTI
REMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLA
AEAEQDQPSRAQSKILFVRSDASREELAELAQQANPEEIELGEDEDEMDLEPNEVRLEQQ
SVPAAVFGSLKED
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgatggcgcgcctctcgaggcccgagcggccggaccttgtcttcgaggaggag
gacctcccctatgaggaggaaatcatgcggaaccagttctccgtcaaatgctggctccgc
tacattgagtttaagcagggtgccccgaagcccagactcaatcagctgtatgagcgggcg
ctgaagctgctgccctgcagctacaaactctggtaccgctacctgaaggcgcgccgggca
caggtgaagcatcgctgtgtgaccgaccctgcctacgaagatgtcaacaactgccacgag
agggcctttgtgttcatgcacaagatgccccggctgtggctagattactgccagttcctg
atggaccagggacgcgtcacacacacgcgccgcactttcgaccgtgccctccgagcgttg
cccatcacacagcactctcgtatttggcccttgtacctgcgcttcctgcgctcacacccc
ctgcctgagaccgccgtgcggggctaccggcgcttcctcaagctgagccccgagagtgcc
gaggagtacatcgagtacctcaagtcgagcgaccggctggacgaggctgcacagcgcctg
gccaccgtggtgaacgacgagcgcttcgtgtccaaggccggcaagtccaactaccagctg
tggcacgagctctgcgacctcatctcccagaacccagacaaggtgcagtctctcagtgtg
gacgccatcatccgcgggggcctcacccgcttcaccgaccaactgggcaagctctggtgc
tcgctggccgactactacatccgcagcggtcacttcgagaaggctcgggacgtgtacgag
gaggccatccggaccgtgatgaccgtgcgggacttcacccaggtgttcgacagctatgcc
cagttcgaggagagcatgatcgcggcgaagatggagactgcctcggagctggggcgggag
gaggaggacgacgtggacctggagctgcgcctggctcgctttgagcagctcatcagccgg
cggcccctgctcctcaacagcgtcctgctgcgccagaacccgcaccacgtgcacgagtgg
cacaagcgcgtggccctgcaccagggccgcccgagggagatcatcaacacgtacacggag
gccgtgcagacggtggaccccttcaaggccaccggcaagccccacaccctgtgggttgca
ttcgccaagttttacgaggacaacgggcagctggatgacgcccgcgtcatcctggagaaa
gccaccaaggtgagcttcaagcaggtggacgacctggccagcgtgtggtgcgagtgtggc
gagctggagctgcggcacgagaactacgaccaggccttgcggctgctgcgaaaggcgacg
gcgctgcccgcccgccgcgccgagtacttcgacggctcggagcccgtgcagaaccgcgta
tacaagtctctgaaggtgtggtcaatgctggccgacctggaggagagcctcggcaccttc
cagtccaccaaagccgtctatgaccgcatcctggacctgcgcatcgccacgccccaaatc
gtcatcaactacgccatgttcctggaggagcacaagtactttgaagagagcttcaaggcg
tacgagcgcggcatctcgctgttcaagtggcccaacgtgtccgacatctggagcacctac
ctgaccaagttcatcgcccgctacgggggccagaagctggagcgggcacgggacctcttt
gagcaggcgctggatggctgccctcccaaatatgcaaagaccctgtacctgctgtacgcg
cagctggaggaggagtggggcttggcccggcacgccatggccgtgtacgagcgcgccacc
agggccgtggagcctgcccagcagtacgacatgttcaacatctacatcaagcgggcagcc
gagatctacggggtcacccacacccgcagcatctatcagaaggccatcgaggtgctgtca
gacgagcacgcccgggagatgtgcctgcggttcgcggacatggagtgcaagctcggggag
atcgaccgcgcccgggccatctacagcttctgctcgcagatctgtgacccccggacgacc
ggggccttctggcagacgtggaaggacttcgaggtccggcacggcaacgaggacaccatc
cgggagatgctgcggatccgccgcagcgtgcaggccacgtacaacactcaggtcaacttc
atggcctcccagatgctcaaggtgtcgggcagcgccacgggcactgtgtccgacctggcc
cccgggcagagcggcatggatgacatgaagctgctggaacagcgggccgagcagctggcg
gctgaggccgagcaggaccagccctcgcgggcccagagcaagatcctgtttgtgaggagt
gacgcctcccgggaggagctggccgagctggcccagcaggccaacccggaggagatcgag
ctgggcgaggacgaggacgagatggacctggagcccaacgaggtgcgtctggagcagcag
agcgtgccggccgccgtgttcgggagcctgaaggaagactga
DBGET
integrated database retrieval system
