Balaenoptera acutorostrata scammoni (minke whale): 103016486
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Entry
103016486 CDS
T03086
Symbol
SH3TC1
Name
(RefSeq) SH3 domain and tetratricopeptide repeats 1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bacu04131
]
103016486 (SH3TC1)
Membrane trafficking [BR:
bacu04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
103016486 (SH3TC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_8
TPR_NPHP3
TPR_2
TPR_1
TPR_10
Csd3_N
Motif
Other DBs
NCBI-GeneID:
103016486
NCBI-ProteinID:
XP_007172373
LinkDB
All DBs
Position
Un
AA seq
1349 aa
AA seq
DB search
MEGPAETAAEEPAPGGRGPVGPSGGSGDRGVQRAGASASVVWQRAGPEEAKSTVGSGPCS
DTDATPAPGVSPPAAGPSPGQMGSYPTDLTLQLLAVQRKSGLPDPSLQQVLRGRLRLLEN
DSWQVARALGELSARLLSIHSDQDRIVVTFKTFEEIWKFSTYHALGFTHHCLENLLVDQT
FWLLEPDEDEETAIQVHVDEEALKLTHESLLFQEGPFFVRCPDHHVRVMSGLQPLRQASG
VPQAEAAPAVDSLAPSHSTSSEEGTAVEPLIPFHQWALRVPWDPINDSMGGPVMPDIQPM
AVGLASAVADCQGSGPEEMTFRGGDHIEILGAQVPGLPWFLGRHAASGQVAFVQTSLIRV
QGQASDLESVIFLNEEERSFFSSEGRFSEEDARQLLRRTSSMDVCTVYSLDTEEAETEQQ
EEHEMPPPCLHPEPRETLQKVKNVLERCKSCQGCPKEPTSPGAHGASSGASSPDTKSCRG
CPEKPGSPGVHGASSGASSPDTKEPSFCLDAGAERADPEALGSLLLFLDKPGFEAGFQGL
YDLSPPRLSGAFGGFTDEEELARLLAEARGLAKKAGLPMALARLCFLLGRLCVRRLKLSQ
ARVYFEEALGALGGRFGDLVLVAAVYTGLAAVHLRQKNREKCGQMVPKALALLLGTPGHV
GGSEAESALLQLGLRRAIGARSPQAEARACFLLAEHHARVKQPEEALPFLERLLQLHGAW
GASGASWPIDCYLLLADVYSRKCLPQLALSCVKVATRRARGSXXXXXXXXXXXXXXXLAP
YLLRALASPASGAGRALRGPIYASLAQLHSHHGRQGRAIAFMTRAAETDAQTGGRTVVDR
LVALAWLHVLHRQIPAALDILESVLEAAVASLDQEGVIANMVAIALKRMGRTRQAAESYY
RALRVARRLGCQRNKAVVLANFGTLCLQTGAGRLAQHYFLEAVKLFSRLPSGECGPDFTQ
VLLRLGHLCTRRALTRQGKCYYEWAFLVAVETDHLESQLHAVQRLCHFYSTVMPSEAQCV
VYHEFQLSLARRVADKVLEGQLLEAISQLYLSLGTERAYKSALEYTKRSLGIFIDLQKKE
KEAYAWLQAGKIYYILQQNELVDLYIQVAQNAALYTGDPKLGLQLFEAAGDIFFNGTWER
EKAVSFYRDRALPLAVTTGSQEAELRLCNKLAALLAKTEAPQEGLEFAHTALALSVTLGD
RLNERVAYHRLAALHQQLGRGELAEHFYLKALSLCTSPLEFDEETLYYVKVYLVLGDIIF
YDLKDPLDAAGYYQLALAAAVDLGDKEAQMKIYMRLAAIYHNFLLDREKSLFFYQKARTF
ATELNIRRGHLAPGRCCGRAAWLVPGPPS
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atggagggcccggcggagacggccgctgaggagccggccccgggggggagggggcccgtg
gggccctcgggaggcagcggtgaccgcggggtccagagagcgggagcaagtgcgtcagtc
gtctggcagcgagcagggcctgaggaggccaagtctacggttggaagcggaccctgctct
gacacagatgccactcctgcccctggcgtctctccaccggctgctgggccctctcccggc
cagatgggctcctaccccacagacctgaccttgcagctgctggctgtgcagaggaagagc
ggattgcccgaccccagcctgcagcaggtcctgcggggccggctccgtcttctggagaat
gacagctggcaggtggcccgtgccctcggggagctatcggccaggctgttgtccatccac
agtgaccaggatcggattgtggtgacgtttaagactttcgaagaaatctggaagttctcc
acctaccacgctctcggcttcactcatcactgcctggaaaacctgctcgtggaccagaca
ttctggctgctcgagcctgacgaggacgaggagacggccatccaagtccacgtggacgag
gaggccttgaagctgacacacgagagcctccttttccaggaagggcctttctttgtccgg
tgtcctgaccaccacgtgagagtgatgagtggcctccagcccctcaggcaggcttcgggg
gttccccaggcagaggcggcaccggcagtggactctttggcccccagccacagcacgtcc
tcggaggaggggacagcagtggagcctttgattccgttccatcaatgggctcttagggtc
ccctgggaccccatcaacgactccatgggtggacctgtgatgccggacatccagccaatg
gctgtgggcctggcctcggccgtggcggactgccagggctcagggcctgaagagatgacc
ttccgaggcggtgaccacatcgagatcctgggtgcccaggtgcctggcctgccctggttc
ctgggccggcacgcggcctccggccaggtcgcctttgtgcagacgagcctcatccgtgtg
cagggccaagcgtctgacttggaaagtgtgatttttctcaatgaagaggaaaggtctttc
ttcagcagcgaaggacgcttttctgaggaggacgccaggcagctactgaggaggacgtcc
agcatggacgtctgcactgtgtacagcttggacacagaagaagctgagacagagcagcag
gaagaacatgagatgcccccgccttgcctgcacccagagccacgtgagaccctgcagaag
gtgaagaatgtcctagaacgatgcaagtcctgccagggctgccccaaggagccaacgtcc
ccgggtgcccacggggcctccagtggtgcgagctcgccggacaccaagtcctgccggggt
tgccctgagaagccagggtccccgggtgtccacggggcctccagtggtgcgagctcgccg
gacaccaaggagccctccttctgcctggacgccggggctgagcgggctgacccggaggcc
ctgggctccctgctgctgttcttggacaagcccggcttcgaggccggcttccagggcctg
tacgacctctccccgccccggctgagcggcgcgttcggcggcttcactgacgaagaggag
ctggcccggcttctggctgaggcccgggggctggccaagaaggccgggctgcccatggcc
ctggccaggctctgcttcctgctggggcggctgtgcgtgcggcggctgaagctgtcccag
gcccgcgtgtacttcgaggaagccctgggggcgctggggggccgcttcggagacctcgtc
ctggtggcggccgtgtacaccggcctggccgctgtccacctgcggcagaagaacagggag
aagtgtgggcagatggtgcccaaggccttggccctgctcctcgggacgcccggccacgtg
ggcggctccgaggccgagtcggcgctcctgcagctcggcctgcggagggctatcggcgcc
cgcagcccgcaggccgaggcccgggcctgcttcctgctagccgagcaccacgcccgcgtc
aagcagcccgaggaggccctgcccttcctggagaggctgctgcagctgcacggggcctgg
ggggcctcgggcgcctcgtggcccatagactgctacctgctgctggcggacgtctacagc
cgcaagtgcctcccgcagctggcgctgagctgcgtcaaggtggccacgcggcgggcgcgg
ggctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagctcgccccc
tacctcctgcgggccctggcctccccggcctcgggcgcggggcgggcgctgcgtggcccc
atctacgccagcctggcccagctgcacagccaccacgggcgacagggcagggctatcgcc
ttcatgacgcgggccgcagagacggacgcccagactggcggccgcacggtcgtggaccgc
ctggtggccctcgcctggttgcacgtgcttcacaggcagatcccggcagccctggacatc
ttggagtccgtcctggaggcggcggtggcctccctggaccaggagggcgtgatcgccaac
atggtagctattgccctgaagaggatgggcaggactcggcaggcggccgagagctactac
cgcgccctgcgggttgccaggcgcctgggttgccagcggaacaaggcggtggtcctggcc
aacttcgggaccctgtgcctgcagaccggcgccggcaggctggcccagcactacttcctg
gaggccgtgaagctcttctcgcggctgcccagcggagagtgcggcccagacttcacccag
gtgctcctgcggctgggtcacctgtgcacccgcagggctctcacccggcagggcaagtgc
tactacgagtgggcctttctggtcgccgtggagacggaccatttggagagccagttgcac
gccgtccagcggctgtgtcacttctacagcacggtcatgcccagtgaggcccagtgcgtc
gtctaccacgagttccagctttcgctggcccgcagggtggctgacaaggtgctggagggg
cagctcctggaggccatcagccaactctacctgtccctgggcaccgagcgggcctacaaa
tccgcgctggagtacaccaagcgcagtctggggatattcatcgacctgcagaagaaggag
aaagaggcatatgcctggctgcaggcggggaagatctactacatcctccagcagaacgag
ctggtggatctctacatccaggtggcacagaacgcggccctgtacacaggggaccccaag
ctggggctgcagctctttgaggcggctggagacatcttcttcaatgggacctgggagcgg
gagaaagccgtgtccttctacagggaccgggcactgcccctggccgtgaccacggggagc
caggaggccgagctgcggctgtgcaacaagctggcagcgctgctggccaagacggaggcg
ccgcaggagggcctggagttcgcccacacggccctggcgctcagcgtcaccctgggggac
cggctgaacgagcgcgtggcctaccatcggctggccgcgctgcaccagcagctgggccgc
ggggagctggcagagcacttctacctcaaggcgctctcgctctgcacctcgccgctggag
tttgacgaggagaccctgtactacgtgaaggtgtatctggtgcttggcgacatcatcttc
tacgacctcaaggacccgctcgacgcggctgggtattaccagctggcgctggcagcggcc
gtggacctgggcgacaaggaggcgcagatgaagatctacatgcgcctggctgccatctac
cacaacttcctcctggaccgtgagaagtccctgttcttctaccagaaggctcggaccttt
gccaccgagctcaacatccgccggggacacctggcccctgggcggtgctgtgggcgggcg
gcctggctggtccccgggcccccgtcctga
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