Balaenoptera acutorostrata scammoni (minke whale): 103016614
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Entry
103016614 CDS
T03086
Symbol
VPS13A
Name
(RefSeq) vacuolar protein sorting 13 homolog A
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bacu04131
]
103016614 (VPS13A)
Membrane trafficking [BR:
bacu04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
103016614 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
Motif
Other DBs
NCBI-GeneID:
103016614
NCBI-ProteinID:
XP_007182353
UniProt:
A0A384A4V3
LinkDB
All DBs
Position
Un
AA seq
3177 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVVNLDKSQLNLGIWAGAVALKNLEIKENALSQLDVPFKIKVG
HIGNLSLIIPWKNLYTQPVEALLEDIYLLIVPSSRIKYDPLKEEKQLFEAKQQELKRIEE
AKRKVADQEKHQVEKQDTFTEKLITQIIKNLQVKISNIHIRYEDDVTNRDNPLSFGISLQ
NLSMQTTDQYWIPCLHDETEKLFRKLILLDNLFAYWNMKSQMFYLGNYDESLDSLRNGIA
DESIIPEGYDFVFRPISANAKLQMNRGLDFDFSAPKISLDVELHDITIEFNKPQYFSLME
LLESVDVMTQNLPYRKFKPDVPLHYHAKEWWVYAIRGILEVNVQPHLRMWSWKHIREHRQ
KMKQYKELYKRKLTSKKPSGELLNSLEELEKTLDVFNITIARQQAEVEVKKAGYRIFREG
AQESEDNKGWFSWLWTWSESRTKQQPDLKPGSLEEMLTPEEKTLLYEAIGYSETAVDPTL
PKTFEAMKFFAHLKSMSIILREQQQKYELLDIVVEEFSTLIVQRPGAQAVKFETQIGSFH
VTGLPGNSTKPRLLSSLDDAASLLRIIFEINPLDETVAQRCIIEAEPLEMLYDARTVNSI
VEFFRPPKEVNLAQLTSVTLTKLEEFRDKTAAGLLYIIETQKVLDLKINLKASYIIIPQD
GIFSPTSNLLLLDLGHLKVTSKIRSELRDLKQGGAKLEEIMCRAYDSFDIQLTSIQLLYS
RVGDNWKEARKLSVSTQHILVPMHFNVELSKAMVFMDIRMPKFKIFGNLPLVSLQISDKK
LQGILELIESIPKPPPATEATEVNVPVKPFQIQRSTSLGTSQISQKKFPLLEIPCVEDDS
DEEFFDAPSSPLEEPLQPPSRVKSPQQKKLQKPDCSKNMTEYKIRFEVPEVLIQFCHLVG
DCELPVVEINVLGLGTDIELRTFDLKANAFLKEVCLKCPEYFDENKKPIYLITTLDNTME
DLLTLEYVKAEKNLPITMLKDTYNSVVQLIKVNFSSLDIHLHTEALLNTINYFNNILPYL
EEKPAPVHIAETEDKGEFIKKIPLKLSKNEDIVTLQILAELSCLQIFIQDQKHNISEIKI
EGLDSEMIMRPSATEINAKLRNIIVLDSDITAVYKKAVYITGKEVFSFKMISYMGATAGS
AYTDMNVFDSQVNLTVGCIEVVLVTKFLYSVLAFIDNFQAGKQALAEATVQAAEMAATGV
KELAQRSSRMALDVDIKAPVVVIPQSPVSENIFVADFGLITMKNTFHVITESQINPPPII
DLITIKLSEMRLYRSQFINDAYQEVLDLLLPLNLEVIVERNLSWEWYQEVPCFNVNAQLK
PMEFILSQEDITTIFKTLYGNIWYEEGDSASCGVIKDQSSVTSGATNASHHSGGTTVVTA
AVVEVHSHASQVKTTLNMSFRTDYLTMVLYSPDPKQTSFTDIRDPSLKLAEFKLENIIST
LKMSTDDSTFSSFSLKNCILDDKRPHVKKATPRMIGLTVGFDKKDMMDIRYRRVRDGWVA
DLVLQEMYICASVEFLLTVANVFLEAYTTGTAVETSVQTWPAKEEVLVQQSEKWEINIII
KNPEIVFVADMTRNDAPALVITTQCEICWQGDFENNTMTAAIKDLQVRACPFLPVKRKGK
ITTVLQPCDLFYQATQISTDPQVIELSVKSLTLKVSPVIINTVITITSALYTAKETIPQE
TASSTAHLWEKKDTKSLKMWFLDEPNEVEKIAPTTELVPKGEIIRMNIDSIFLVLGAGIG
HRTVPMLLAKSRFSGEGKNWSSLINLHCQLELEVHYYNEMFGVWEPLLEPLEIDQTEDFR
PWNLGIKMKKKAKKAIVESSTEEENYKVPEYKTIITFHSKDQLNITLSKCGLVMLNNLVK
AFTEAATGSSAAFIRDLAPFMILNSLGLSISVSPSDSFSVLSVPMAKSYVLKNEESLSMD
YIRTKDSDHFNAMTSLSSKFFFILLTPANHSTADKIPLTKVGRRLYTVRHRESGVERSIV
CQIDAVEGSKKVTIRSPVQIRNHFSIPLYVYGGDTLLGTASPGSEFNIPLASYRSLLSLK
PEDEDYQMCEGIDFEEIIKNDGTFLKKKCRSINPSKKPFIINIVPEKDNLTSVQVYSEDG
WDLPYIMHLWPPILLRNLLPYKIAYYIEGIEHRVFTLHEGRSAQICTVQLDKARLHLKLL
DYLNHDWKSEYHMKPNQQDISFISFTCVTEIEKTDLDIAIHVTYNTGQTVMAFHSPYWMV
NKTGRMLQYKADGIHRKHPPNYKKPVLFSFQPKHFFNNNKVQLMVTDSELSDQFSIDTVG
SHGAVKCKGLKMEYQVGVTIDLSSFNITRIVTFTPFFLLKNKSKYRISVAEEGSDKWLSL
DLEQCIPFWPEDASNKLLIQVERSEGSPKKIHFNKQESCILLRLDNELGGIIAEVNLAEH
STVITFSDYRDGAATFLLINHTKNDIVQYKQSSLCEIEDSLPPGKAVFYTWADPVGSRKL
KWRCGKSHGEVTQKDDMMAPINLGEKTIYLVSFFEGLQRIILFTEDPRVFKVTYESEKAE
LAEQEIVLALQDVGISLVNNYTKQEVAYIGITSSDVVWETKPKKKARWKPMSVKHTEKLE
KEFKEYTESSPSEDKVIELDTNIPVRFTPSGTNMKILQPHVIAIRRNYLPALKVEYSTSA
HQSSFRIQIYRIQIQNQIHGAIFPFVFYPIKPPKSVTMDSAPKPFTDVSIVMRSAGHSQI
SRIKYFKVLIQEMDLRLDLGFVYAISELMTAAEVTEKTEVELFHKDIEAFQEEYKIVSLV
DSSQFSLYEYFHISPIKLHLSVSLSSGGKEAKDSEQPEGLMAVHSLNLLLKSIGATLTDV
QDVVFKLAFFELNYQFHTTSELQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSE
GVEAFFYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASKITSAMAKGVAAMTMD
EDYQQKRREAMNKQPAGLREGITRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGV
GKGLVGAVTRPTGGIIDMASSTFQGIKRATETSDEVESLRPPRFFNEDGVIRPYRLRDGT
GNQMLQVMENGRFAKYKYFTHVMINKTDMLMITKSGVLFVTKGTFGQLTCEWQYSFDEFT
KEPFIVHERRLRIEAKERVKSVFHAKEFGKIINLKTPEDARWILRKLEEAREPSPSL
NT seq
9534 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgagtcggtggtcgtggacgtgttgaaccggttcttgggggactatgtggtg
aacctggacaagtcccagctcaatctgggcatctgggcaggagctgtggccctgaagaat
cttgaaattaaagaaaatgccctgagtcaactggatgtaccatttaaaattaaagttggc
catataggtaatcttagtcttataattccatggaaaaatctttatacccaaccagttgaa
gctctattggaagacatttatctactcatagtgccttcttctagaataaaatatgatcct
ttaaaagaagaaaaacaactctttgaagcaaagcaacaggaactgaaaaggatagaagaa
gcaaaacgaaaagtagctgatcaagaaaaacatcaggtggagaaacaggacacttttaca
gaaaaattaattactcagatcataaaaaatcttcaagtgaaaatttccaacatccatatt
cgctatgaagatgatgtcacaaatcgagacaacccactgtcatttggtatttcccttcag
aatctcagcatgcagacaactgatcaatactggattccatgtttacatgatgaaactgag
aaactatttcgtaagttaatcctattggataacctttttgcctattggaatatgaagtct
cagatgttttatcttggtaattatgatgaatcattggacagcctgaggaatggtattgct
gatgaaagtattattccagaaggttatgattttgtatttcgccccatatctgctaatgcc
aaacttcagatgaatcgcggattggattttgacttttctgcccccaaaataagcctggat
gttgagttacatgacataacaattgaatttaataaaccacagtatttcagtcttatggaa
cttcttgaatcggttgatgtgatgacgcaaaatctaccatacaggaaattcaaacctgat
gtacctctccactaccatgccaaagaatggtgggtttatgctatacgtggtattcttgaa
gtaaatgttcagccccacttacggatgtggtcatggaagcatataagagaacacaggcaa
aaaatgaagcaatataaagaactgtataaaagaaagctaacaagtaagaagccgtctggt
gaacttctcaactctttggaggagttggaaaagactttggatgtatttaatataactata
gcaagacaacaggcagaagttgaggtaaagaaagctggatacaggattttcagagaagga
gcacaagagtcagaggataataaaggatggtttagctggctgtggacttggtcagaatca
cgtactaaacaacaaccagatcttaaacctggaagtcttgaagaaatgttgacacctgaa
gaaaaaactttactatatgaagcaattggctatagtgaaacagcagttgatccaaccttg
ccaaaaacatttgaagccatgaagttttttgctcacttgaaaagtatgtctattattcta
agagaacaacaacaaaaatatgaactgttagatattgtagtggaagaatttagcactttg
attgtgcaaagaccaggagcacaagcagttaaatttgaaacccagataggttcatttcat
gttactggcttaccaggtaattcaacaaaaccccgcctcctgtcttcattggatgatgct
gcatcactcttgcgaattatatttgagataaatccattagatgaaactgttgctcaaagg
tgtatcatagaagctgaacctttagaaatgctatatgatgcaagaacagttaatagtata
gtggaattcttcagacctccaaaagaggtaaatctagcacagctgacttcagtgactttg
acaaaacttgaagaatttcgtgataagacagcagcaggtctgctgtatattattgaaaca
cagaaagttcttgatctcaaaattaatttgaaggcttcgtatattattatcccacaagat
ggaatttttagccctacatcaaatctgcttcttttggatcttggtcatctaaaggtgaca
agtaaaattcgttcagaattacgagatttaaaacaaggtggggcgaaacttgaagagata
atgtgtagagcttatgattcctttgatattcagcttacaagcatacagctgctttacagc
agagttggtgataattggaaagaagcacgaaaactcagtgtatccacacaacatatcttg
gtacctatgcacttcaatgtggaactctctaaggccatggttttcatggatataaggatg
cccaaattcaagatttttggaaacttaccactggtttctttacaaatctcagataaaaaa
ctgcaagggattttggaattgattgaaagcatcccaaaacccccacctgcaactgaagca
actgaagtaaatgtccctgtcaaaccatttcagattcaaagatccacttctttgggaaca
tcacagatttcacagaaaaagtttcctcttttggaaattccatgtgttgaagatgattca
gatgaggagttttttgatgccccatctagtcccttggaagagcctcttcaacctccatct
agagttaaaagtcctcaacaaaaaaagcttcaaaagccagattgttcaaaaaatatgact
gagtataaaataagatttgaagtgccagaggttttgattcaattctgtcaccttgttgga
gattgtgaactacctgtggtagaaattaatgtcttgggattgggcacagacattgagctt
agaacatttgatttgaaagcaaatgcctttttgaaagaggtctgcttaaaatgcccagaa
tattttgatgaaaacaagaaaccaatttatttgattacaacactggataacacaatggaa
gatctgttaacactggaatatgtgaaggctgaaaagaatttacccataacaatgttgaag
gacacctataacagtgttgtgcaactgattaaggtgaatttttcctctttggacattcat
ttacatactgaagcacttctgaatacaataaattattttaataatatccttccatatttg
gaggaaaaaccagccccagtgcatattgcagagactgaagacaaaggagagtttattaaa
aaaatacctttaaaattatccaagaatgaagatattgttaccttacagattttagcagaa
ttatcatgtttacagatctttattcaagatcagaaacataacatttcagaaattaagatt
gaagggcttgattctgagatgattatgaggccatcagcgactgaaataaatgcaaagcta
aggaatataattgttctggattctgatataacagctgtatacaaaaaggctgtttatatt
actggaaaagaagttttcagcttcaaaatgatttcttatatgggtgcaactgctggttct
gcgtacacagatatgaatgtgtttgacagtcaagttaatttaactgttggttgcattgaa
gtagttcttgtcacaaaatttctgtattctgtattggcttttatagataattttcaagca
ggtaaacaagccttggctgaggcaactgttcaggcagcagaaatggctgctactggtgta
aaagaactggcacaaaggagttctagaatggcattggatgttgacatcaaagccccagtt
gtggttatcccacagtctccagtttctgaaaatatttttgttgctgattttggactaatt
acaatgaaaaatacattccatgtgataacagagagtcagatcaaccccccacccattatt
gatttgataacgataaagctgagtgaaatgcgactatacaggtctcaatttattaatgat
gcataccaggaagtactggatctactattgccactaaatcttgaggtgattgttgagcga
aatttatcctgggagtggtaccaggaagttccttgttttaatgtaaatgctcaactgaag
cccatggagttcattcttagtcaagaagatataacaactatttttaaaacattatacggc
aacatatggtatgaagaaggtgatagtgcctcatgtggagtaataaaagatcagtctagt
gttactagtggtgctactaatgcttcacaccattcaggaggaacaactgtagtgacagct
gctgtggtagaagtacattcacatgcttcccaagttaagacaacactaaatatgagtttc
agaactgattatctcaccatggtactgtatagtccagatcctaaacagacttcctttaca
gatattcgtgatccttctctgaaactcgctgaatttaagttggagaatattataagtact
ttaaaaatgtctacagatgactcaacattttcttccttctcattaaaaaactgtatttta
gatgacaaaaggcctcatgtcaagaaggcaactcctagaatgataggactaacagttggg
tttgacaaaaaggacatgatggatataaggtataggagagtcagagacggttgggtggct
gatttagtccttcaagaaatgtatatttgtgcaagtgtggaatttctgctgacagttgca
aatgtctttcttgaggcctacactacaggcactgctgtagaaaccagtgttcaaacatgg
cctgctaaagaagaagtacttgtacaacaatcagagaagtgggaaattaatattattatt
aaaaatcctgagattgtgtttgtggctgatatgacaagaaatgatgctcctgccttagtc
attacaacacaatgtgagatttgttggcaaggtgactttgaaaataatacaatgaccgct
gccattaaagatctccaagtgagagcatgcccatttcttccagtcaagagaaaaggaaaa
atcactactgttttgcagccttgtgatttgttctatcaagctactcagataagtacagat
ccacaggtgattgaattatcagtaaaatccctcacactgaaggtttcaccggttatcata
aatactgtgattaccataacttcagcactttatacagctaaggaaaccatcccacaagaa
actgcttcttctacagcacatttatgggaaaagaaggatacaaagagtttaaaaatgtgg
tttcttgacgaaccgaatgaagttgaaaaaatagctcccacaactgaattggtacccaaa
ggagaaataataagaatgaacattgattctatttttctagttcttggggctggaattggt
catcgaacagtacctatgcttttggcaaaatcacgtttctcaggggaaggcaaaaactgg
agttccctaataaatctccactgtcaacttgagctagaagtacattattacaacgaaatg
tttggtgtgtgggagcctttgcttgaacccttagaaattgatcagactgaggattttaga
ccatggaatcttggaatcaagatgaaaaagaaagccaaaaaggccattgttgagtcaagt
actgaagaagaaaattacaaggtaccagaatataaaactatcatcactttccattcaaaa
gaccaactaaacattacattatccaaatgtggccttgtaatgttaaataatttagtcaag
gcatttacagaagctgccactggatcttcagctgccttcataagggatctagcaccattt
atgattttaaattctcttggacttagtatctctgtttcaccaagtgactcttttagtgtg
ctcagcgtacctatggcaaaatcatatgtattgaaaaatgaggagagtttaagtatggat
tatatccgaactaaggacagtgatcatttcaatgcaatgaccagcctaagcagcaaattc
ttcttcattcttcttacacctgctaaccactctactgctgataaaatccctttaacaaaa
gtgggacgacgactgtacactgtaagacacagagagtctggagttgaaagatctattgtt
tgtcaaattgatgcagtggaaggaagtaagaaggtaacaattcgctccccagtgcagatt
agaaatcatttttcaataccactttatgtttatggaggggacaccttattgggaacggct
tcacctggaagtgaatttaacataccattagcatcttaccgatcactcctttccctgaag
ccagaagatgaggactatcaaatgtgtgaaggaattgattttgaagaaattataaaaaat
gatggcacttttctcaagaagaaatgtagatctataaacccttccaagaagccatttatc
attaatattgtcccagaaaaagataatttgacatctgtgcaagtgtattcagaagatggt
tgggacttaccatatataatgcatttgtggccacctattctactccgaaatcttcttcct
tacaaaattgcttattatatagagggcattgaacatagagtttttactctacatgaaggc
cgttcagcccagatttgtactgtacagttggataaagccaggctgcatttaaaattactt
gactatcttaatcatgattggaaaagtgaatatcatatgaaacctaatcaacaagatatt
agtttcatcagttttacttgtgttacagaaatagaaaagactgatttagatattgctatc
catgtgacttataatactggccagacagttatggcatttcatagtccttactggatggtc
aataaaactggtcgaatgttacagtataaagcagatggaattcatcgaaagcatccacct
aattataaaaagccagttctcttttcttttcagccaaagcatttttttaataacaataag
gttcagcttatggtaactgatagtgaattgtcagatcagttttcaattgatactgttggt
agtcatggagctgttaaatgtaagggcctgaaaatggaatatcaagttggtgtcactata
gatcttagcagttttaacattaccagaattgtcacatttacacccttttttttgcttaaa
aacaaaagtaaatatcgtatatcagtggctgaagagggaagtgataaatggctctctctt
gatttggagcagtgtatccccttttggcctgaggatgcttctaataaacttcttattcaa
gttgaaagaagtgaaggctctcccaaaaagatacattttaacaagcaagaaagttgtatt
ttattgcgtctggataatgagcttggaggtattatagcagaagttaatttggctgagcat
tctacagttattacattttcagattatcgtgatggagcagctacattcctgttaataaat
cacaccaagaatgacattgttcagtacaagcaaagttccctctgtgaaatagaagattcc
ctccctcctggaaaagcagttttttatacgtgggctgatccagtgggctctagaaagctg
aagtggagatgtggaaaaagccacggtgaagtaacacaaaaggatgatatgatggcacct
ataaatctgggggaaaagaccatttatttagtttcattctttgaaggcttacaacgcatt
attttattcactgaagatccaagggtatttaaagtgacatacgaaagtgagaaagcagag
ttagcagagcaagaaattgtgttggcattacaagatgttggaatttctcttgtcaacaat
tatacaaagcaagaagtagcctatatcggcattacaagttctgatgtggtttgggagaca
aagcccaagaagaaggcaagatggaagccaatgagtgtaaagcacactgagaagttagag
aaagaatttaaggaatatactgaatcttcaccgtcagaagataaggttattgagttggac
actaacattccggttcgcttcacacctagtggtactaacatgaagattctgcagccacat
gtaatagctataagaagaaattaccttccagcattaaaagtagaatatagcacatctgca
catcaatcatcatttagaattcaaatttacagaatacagatccaaaaccagatacatggt
gctatatttccatttgtgttttaccccattaaacctcctaagtcggtcaccatggattca
gcaccaaagccctttacagatgtcagtattgtcatgagatctgcaggacattcgcagata
tcacgtattaagtatttcaaagtgttgatccaagaaatggatctcaggttggatcttggg
tttgtctatgctatatcagaacttatgacagcagctgaagtaactgaaaaaacagaggtt
gaactttttcataaagatatagaagctttccaagaagaatataaaatagtttcattagta
gattcatcacaattcagtctctatgaatactttcatatatctcctatcaagttgcattta
agtgtttcactgagttcaggtggcaaagaagctaaagattcagaacaacctgaaggactg
atggcagttcattctttaaatcttttgctgaagagtattggtgccactcttacagatgta
caagatgtagtttttaagcttgcattttttgaactcaactatcagttccatacaacatct
gaactacagtctgaagtaataagacactattcaaaacaggccattaagcagatgtatgta
ctcattcttggacttgatgttttgggaaatccctttggcttgattagagaattttctgaa
ggtgtagaagcatttttttatgagccttaccagggagccatccagggtcctgaagagttt
gtggaaggaatggcactgggactgaaagcactagttggtggagctgttggtggattagct
ggtgctgcctccaaaatcaccagtgctatggctaaaggggtagcagctatgactatggat
gaagactaccaacagaagagaagagaagccatgaacaagcaaccagctggtcttagagaa
ggcatcactcgtggaggaaaaggattagtttctggttttgtaagtggcataacaggaatt
gttacaaaaccgatcaaaggagctcaaaaagaaggagcagctggtttctttaaaggtgtt
gggaaaggtttagttggagcagtgacaaggccaactggaggcatcatagacatggctagc
agtacatttcagggaataaaaagagctacagagacttctgatgaagtggagagtctgcga
ccccctaggttctttaatgaagatggagttatcagaccttacaggttgagggatggtact
ggaaatcaaatgctacaggtcatggaaaatggaagatttgcaaaatacaaatattttacc
catgtcatgatcaataaaacagacatgttaatgataaccaaaagtggtgtgttgtttgta
acaaaaggaacatttggacagcttacatgtgagtggcagtatagttttgatgagtttacc
aaagagccattcattgttcatgagagaaggttgcgcattgaagcaaaggagcgggtgaag
tctgtattccatgccaaagagtttggaaaaataattaacctcaagaccccagaggatgca
aggtggatcctcagaaagctagaagaagcaagagaaccttccccaagcctctga
DBGET
integrated database retrieval system
