Balaenoptera acutorostrata scammoni (minke whale): 103017314
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Entry
103017314 CDS
T03086
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA processing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103017314 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bacu03041
]
103017314 (PRPF38B)
Spliceosome [BR:
bacu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
103017314 (PRPF38B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
103017314
NCBI-ProteinID:
XP_007169550
UniProt:
A0A383Z315
LinkDB
All DBs
Position
Un
AA seq
544 aa
AA seq
DB search
MANNSPALTGNSQPQHQAAAAAAQQQQQCGGAGATKPAVSGKQGNVLPLWGNEKTMNLNP
MILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRGVG
TGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDWFES
FLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKTRPRKI
KKDGKESAEEVDRHVERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREKE
RQRLEREAKEREKERRRSRSIDRGLERRHSRSWERHRSRSRSRDRKGDRRDRDREREKEN
ERGRRRDRDYDKERGNDREKERSRERSKERRSRGEVEEKKYKEDKDDRRHRDDKKDSKKE
KKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRSGSQGRTDSV
EKSRKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDKHDPRRSQSIESESQEKQHKNK
DETV
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaacagccccgcgctgacaggcaactcgcagccgcagcaccaggcggccgca
gccgcggcccagcagcagcagcagtgcggcggcgctggcgccaccaagccggcagtctcg
ggcaagcagggcaatgtgctgccgctgtggggcaacgaaaagactatgaatctcaacccc
atgatcttgaccaatatcctgtcgtcgccttacttcaaagtgcagctctacgagctcaag
acctaccacgaggtggtggacgagatctactttaaggtcacacatgttgaaccatgggag
aaaggaagcaggaaaacagctggccaaacagggatgtgcggaggggttcgaggcgttggg
acaggaggaattgtttctacagctttttgcctgttatacaaattatttactctgaagtta
actcgcaagcaagtgatgggtcttataacacacacagactctccatatattagagccctt
gggtttatgtatataaggtacacacagccccctacagatctatgggattggtttgaatcc
ttccttgatgatgaagaggacctagatgtgaaggctggtggaggctgtgtaatgaccatt
ggagaaatgctacggtcttttctcacaaaactggagtggttttctaccttgtttccaaga
attccggttccagttcagaagaatatcgatcaacagattaaaacccgaccaagaaaaatc
aagaaagatggaaaggaaagtgctgaggaagtagacagacatgttgaacgcaggcgttca
aggtctccaaggagatcactgagtccacggaggtccccaagaagatccagaagtagaagc
catcatcgggagggccatgggtcttctagttttgaccgagaattagaaagagagaaagaa
cgccagcgactagagcgtgaagccaaagaaagggaaaaagaaaggcgaagatcccgaagt
attgatcgggggctagaacgcaggcatagcaggagttgggaaagacatagaagccgtagt
cgaagtcgtgataggaaaggggatagaagggacagggatcgggaaagagagaaagaaaat
gagagaggtagaagacgagatcgtgactatgataaggaaagaggtaatgaccgagaaaag
gagagatcaagagaacggtccaaggaacggagaagtaggggtgaggtagaagaaaagaaa
tataaagaagacaaagatgataggcggcatagagatgacaaaaaagattccaagaaagag
aaaaaacatagtagaagtagaagcagagaaagaaaacatagaagtaggagtagaagtaga
aatgcagggaaacgaagtagaagcaggagcaaagagaaatcaagtaaacataaaaatgaa
agtaaagaaaaatcaaataaacggagtagaagtggcagtcaaggaagaactgacagtgtt
gaaaaatcaagaaaacgggaacatagccccagcaaagaaaagtctaggaagcgtagcaga
agcaaagaacgttcccacaaacgagatcacagtgatagtaaggaccagtctgacaaacat
gatccccgaaggagccaaagtatagaatcagagagccaagaaaaacaacataaaaacaaa
gatgagactgtgtga
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