Balaenoptera acutorostrata scammoni (minke whale): 103017674
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Entry
103017674 CDS
T03086
Symbol
SYMPK
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu03015
mRNA surveillance pathway
bacu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103017674 (SYMPK)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
103017674 (SYMPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bacu03021
]
103017674 (SYMPK)
03019 Messenger RNA biogenesis [BR:
bacu03019
]
103017674 (SYMPK)
Transcription machinery [BR:
bacu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103017674 (SYMPK)
Messenger RNA biogenesis [BR:
bacu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
103017674 (SYMPK)
U7-dependent histone pre-mRNA processing factors
103017674 (SYMPK)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
PDS5
Cnd1
Cohesin_HEAT
INTS7_N
Motif
Other DBs
NCBI-GeneID:
103017674
NCBI-ProteinID:
XP_007168226
UniProt:
A0A383YZJ2
LinkDB
All DBs
Position
Un
AA seq
1273 aa
AA seq
DB search
MAGSSGDSVTRRSVASQFFTQEEGPGIDGMTTSERVVDLLNQAALITNDSKITVLKQVQE
LIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLRD
ENVNVVKKAILTMTQLYKVALQWMVKSRVISELQEACWDMVSAMAGDIILLLDSDNDGIR
THAIKFVESLIVTLSPRMADSEVPRRQEHDISLDRIPRDHPYIQYNVLWEEGKAALEQLL
KFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSVRKN
LKLHLLSVLKHQASLEFQAQITTLLVDLGTPQAEIARNMPSGKDARKRPRDDSDSTLKKM
KLEPNLGEDDEDKDLEPGPSATSKASAQISGQSDTDITAEFLQPLLTPDNVANLVLISMV
YLPEAMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKQCKEEPKEEK
VVKPESVLIKRRLSAQGQAISVVGSLSSMSTLEEEAPQAKRRPEPIIPVTQPRLAGAGGR
KKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAAQVRIKILASLVTQFDSGL
KAEVLSFILEDVRARLDLAFAWLYQEYNAYLAAGAAGTLDKYEDCLIRLLSGIQEKPDQK
DGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLDL
SSHEKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAA
PWTEETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSPE
LLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEK
KEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELLIALHNIDSSKCDMK
SIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNIL
SRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHVR
SFTPHQQAHIPNSIMTILEASGKQEPETKEAPAGPLEEDDLEPLALAPPPAPRPPQNLIG
LRLAQEKALKRQLEEEQKLKPGGVGAPSSSSSSLSSSSARPGPPQLEEAIDFREEGPECE
TPAIFISMDDDSGLAEAALLDSSLEGPLPKEAAAGGLISKEXPQTLTPAGEDTVKTPSPT
AEEAGEPETKGNS
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcagcagcggggacagcgtcactcgccggagcgtggcatcacagtttttcaca
caagaggaggggccgggcattgatggtatgaccacatcagagagagtggtggatctcctc
aaccaggcagcactgatcaccaatgattcaaagatcacagtgctcaaacaggtccaggaa
ctgatcatcaacaaagatcccacactactggacaacttcctggatgagatcatcgctttc
caagcagacaagtccattgaagtgcgcaagtttgtcatcggcttcatcgaggaggcatgc
aagcgagacattgagttactgctgaaactgatcgcaaatctcaacatgctcttgagagat
gagaatgtgaatgtggtgaagaaggccatcctcaccatgactcagctctacaaggtggcc
ctgcagtggatggtgaagtcacgggtgatcagcgagctccaggaagcctgctgggatatg
gtgtctgccatggctggggacatcatcctgctgttggactctgacaatgacggcatccgt
acccacgccatcaagtttgtggagagcctcattgtcaccctgtcgccccgcatggctgac
tcggaggtgccccgacgccaggagcacgacatcagcctggaccgcatccctcgtgaccat
ccctatatccagtacaatgtgctgtgggaagaaggcaaggcagccttagagcagttgctc
aagttcatggtgcaccccgctatctcctccatcaacctgaccacagccctgggctccctc
gccaatattgcccgccagaggcccatgttcatgtctgaggtgattcaggcctatgaaacc
ctgcacgccaacctgcccccaacgctggccaaatctcaggtgagcagcgtgcgtaagaac
ctcaagttgcacctgttgagtgtgctgaagcaccaagcctccttggagttccaggctcag
atcaccaccctgctggtagacctgggtacacctcaggctgagatcgcccgcaacatgccc
agcggcaaggatgcccgcaagcggccccgagatgactcagattccacgctcaagaagatg
aagcttgagcccaacctgggggaagacgacgaggacaaggacttggagccaggcccctca
gcgacctcgaaggcctcagcccagatctcaggccagtcagacacagatatcacagccgag
ttcctacagcctctgctgacacctgacaatgtggccaatctggtcctcatcagtatggtg
tacctgcccgaggccatgcccgcctccttccaagccatctacaccccagtggagtcagca
ggcactgaagcccagatcaagcacctggctcggctcatggccacacagatgactgccgca
ggactggggccaggcgtggagcagaccaaacagtgcaaggaggagcccaaggaggagaag
gtggtgaagccggagagtgtcctgatcaagcggcgcctgtcagctcagggtcaggccatc
tcggtagtgggctccctgagctccatgtccactctggaggaggaagcgccccaggccaag
aggaggccagagcccatcatccccgtcacgcagccccggctggcaggcgccggcgggcgc
aagaaaatcttccgtctgagtgatgtgctgaagcccctgaccgacgcccaggttgaggcc
atgaagctgggcgctgtgaagcggatcctgcgggctgagaaggccgtggcctgcagtggg
gcagcccaggtgcgcataaagatcctggccagcctggtgactcagttcgactcgggcctg
aaggccgaggtcctgtccttcatcctggaagacgtgcgggcccgcctggacctggccttt
gcctggctctaccaggagtacaacgcctacctagcagctggtgccgcgggcaccctggac
aagtatgaggactgcctcatccgcctgctctccggcattcaggagaagccagaccagaag
gatgggatcttcaccaaggttgtactggaggcgccgctcatcactgagagtgccctggag
gtgattcgcaagtactgtgaggatgagagtcgcacctacctgggcatgtccactcttcga
gacctgatcttcaagcgcccgtcccgccagttccagtacctgcatgttctgctagacctc
agctcccatgagaaggacaaggttcgttcccaggccttgctattcatcaagcgcatgtac
gagaaggaacagctacgagagtatgtggagaagtttgccctcaactacctacagctcttg
gtccaccccaaccctccatctgtgctctttggagctgacaaggacacagaggtggcagcg
ccctggactgaggagacagtaaagcagtgtttgtacctctacctggccctcctgcctcag
aaccacaagctgatccacgagctggcagccgtgtatactgaggccatcgctgacatcaag
aggacagtgctgagggtcatcgaacagccgatccgaggaatgggcatgaactcgcccgag
ctgctcctgctggtggaaaactgtcccaagggggcagagacactggtcacacgttgtctg
cacagcctcacggacaaagtcccgccctccccagagctggtgaagcgggtccgggatctc
taccacaagcgactgcccgacgtccgcttcctcatccctgtgctcaatgggctggaaaag
aaggaagtgatccaggccctgccaaagctcatcaaactcaaccccatagtggtgaaagag
gtcttcaaccgcctgctgggcacccagcacggtgaagggaactcagccttgtcccccctg
aaccctggagagcttctcatcgcattacacaacatcgactcctcgaagtgtgacatgaag
tccatcatcaaagccaccaacctgtgctttgcggagcggaacgtgtacacgtcggaggtg
ctggccgtggtgatgcagcagctgatggagcagagtcccctgcccatgctgctcatgagg
accgtcatccagtccctgaccatgtacccccgcctggggggcttcgtcatgaacatcctt
tcccgcctcatcatgaagcaggtgtggaagtatcccaaggtgtgggagggcttcatcaag
tgctgtcaacgcaccaagccccagagcttccaggtcatcctgcagctcccaccccagcag
ctgggtgccgtctttgacaagtgcccggagctccgggagcccctgctggcccacgtccgt
tccttcaccccccaccagcaagcacacatccccaactccatcatgaccatcctggaggcc
agcggcaagcaagagccagagactaaggaagcacctgccgggcccctggaagaggatgac
ttagagcccctggccctggcaccgccccctgccccccgaccccctcaaaacctcatcggc
ctgcggctggcccaggagaaggccttgaagcggcagctggaggaggaacagaagctgaag
cctgggggagtgggagccccctcctcgtcctcctcgtcgttgtcctcttcctcggcccgg
ccaggccctccccagctggaggaagccattgatttccgggaggaggggcctgagtgtgag
accccggccatcttcatcagcatggacgatgactcggggctggctgaggcggcactgctg
gactctagccttgagggacccctgcctaaggaagctgcagcgggcggattgatttcaaag
gaagnnccccagaccctcacccctgccggagaagacaccgtgaagactcccagccccact
gctgaggaagccggggaacccgagaccaaggggaacagctga
DBGET
integrated database retrieval system
