Balaenoptera acutorostrata scammoni (minke whale): 103017841
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Entry
103017841 CDS
T03086
Symbol
SLX4
Name
(RefSeq) SLX4 structure-specific endonuclease subunit
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
103017841 (SLX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bacu04121
]
103017841 (SLX4)
03400 DNA repair and recombination proteins [BR:
bacu03400
]
103017841 (SLX4)
Ubiquitin system [BR:
bacu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
103017841 (SLX4)
DNA repair and recombination proteins [BR:
bacu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
103017841 (SLX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slx4
BTB
zf-C2H2_4
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
103017841
NCBI-ProteinID:
XP_007181611
UniProt:
A0A384A2N8
LinkDB
All DBs
Position
Un
AA seq
1776 aa
AA seq
DB search
MMDESDDDFKELCASFFQRVKKNGPKEVSGERKTQKASDSTQIRSKLKRTKPTASKSKTL
QGPTERKTRSGSQVLRTQKQGAPKWPESEPAPPENGEGGVHASAVLQDSAWSTQTEAAPD
SCSQPPPSCLTVMVPSPSKPRAAELVLQRMQQFKRADPERLKHGSEGCSLEAALEENVPK
GPQEMMARNGSGPRLPATESDTAVALALQHEFGPERASTHNDSLEEKGLFFCQICQKNLS
AMTVTRREQHVNRCLDEAEKALRPSVPQIPECPICGKPFLTPKSRISHLKQCAVKMEIGP
QLLLQAVRLQTAQPEGASGTLASSLRDHAGGLKRKGATAKKEPQKRRKVAKPEAPSEDLL
VAMALSRSEMEQEAVPAALRLGNAFSGRTRPGAALEKKSRKKRAPVTPPQLLVQDAETTG
RQMEDRVAQLLAEELELSGTPPLPASRIFKEELEKGRRGLRPPGGKQNFLWEGSALTGAW
ALESFYTASLVPPLVPQRPAEGLTQEPTLPLELPEKPEPGVQTPLAVHGTRPVGHSPLSP
APSASQREHQALQDLLDLAGEGLSASPWPCSGGPAGSGGATGMDLLPSSLPLTGFVLPAK
EKCLERSGQASLALGLLVADFGAMVNNPHLSDIQFQMDGGEVLYAHKFVLYARCPLLMQH
VNSEGFFAIEDGDVRTQRVLLSDVSAEAARMFLRYLYAADTALTPQLAPDLSSLAHRFGV
TELVHLCEQVPVLMDAEGGQQKEQEDEDCESRVETFQELLRSVWRGEEEEAEALPISEGR
EEDREKVNEAEMEEIYEFAATQRKLLQGEKAPAMEEETDQLREDGPVSGGILTSVRNKEQ
SENAEQMESSGQGRDEAPDKWKNMRQSTLLPPGDQGLDREKKAESPKEALALPYSSSPAR
GRAEKQESTFLCSVDVDDDEQSFSSPQARYPEPSQMTSDRKEGNCTVWEREIESSHPPAH
QQAPPSHSPFFPSHPHQGRSPCRPHLRSRHTSDLSLPTPQLQGTASRVASQNSSPKPKRA
RSLPMSRKDPGQKDKECSSVFKHRGKGVLISPEKSPPMDLTQSEPGCLSARSQNSPSSVN
REDEVILLLDSDEELELEQIKIKSVLNGPSEERKVLEVSTKSSELFSIIDLDAEQEHSQS
PPGREPTLQQEVEGPLGNRGSVGDRGTPQLFCDPKISGDEDSTTDTSWLVPATPLASRSR
DCSSQTQITGLRSRPSADPLAQPKPRALLQNRDEPEAMSKFSVIVPQTSSLLGHVAPGSP
DSRRQVCRSPSSPHPRCHQYFSPLAPRSSSGGLADLTGQFQRHPPPVPSPGVQATASEVV
EVEDSEEEQEVASRKASNIPLPGSDPPMPADDWCWHVEPLSPIPIDHLNLEWTGPLSTSS
PGSRVEGAPDSGDCCSPALLGTTPIRGSCTGQRKAQEKSPGAGSPGSSRLSFLNSALWDD
WDGEQKSPEALPLPQTPSADGAQKLQELQTPKGANRKKNLPPEVPITPMPRYSIMETPVL
KKELDRFGVRPLPKRQMVLKLKEIFQYTHQTLESDSEEESQSSQMPLEAPCSQTYTTKTS
KASRAAGRTQLEATSGPVPQRSKGPAKNKGPQHQKMQPGGSIPALSMSPAKEGPPGPDGD
TQLPASQESMATSVDSSDSSCSSQSSSCEFGAALESAGEDEEDEESVSASQAAIQGAATE
EAVRHYICSKPALYRKVLLYQPLELAELQAELKQQGIHVATGKLLDFLDTQCITFTTAAA
RKEKLERKRRQPVGKKTGVRTRRPVPRPQPLAISSL
NT seq
5331 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgagtcagacgatgactttaaggaactctgtgccagctttttccaaagggtg
aaaaagaatggccccaaggaagtgtcgggggaaaggaagacacaaaaggcctcagacagc
acccagataagaagcaaactgaaaaggaccaaaccaactgcttccaagagcaaaaccctt
caaggccccactgagaggaaaactcgctctggcagccaggtcctgcggactcaaaagcaa
ggggcacccaagtggccagagagtgaaccagctccccctgaaaatggggagggaggcgtg
catgcttctgctgtgctccaagacagtgcatggagcacccagacagaggctgctcctgac
agctgctcccagccccctccttcctgtctgactgtgatggtgcccagtccctccaaaccc
cgggcggcagagctggtgctacagcgaatgcagcagttcaagagagcagaccccgagcgt
ttgaaacacggttcagaagggtgctccctagaggctgcacttgaagaaaacgtcccaaag
ggccctcaagagatgatggcacggaacgggtctgggcccaggctccctgccacagagagc
gacactgcagtggccttggccctccagcacgagtttgggccagaacgggcatccacacac
aatgacagcctggaggagaaggggttgttcttttgccagatctgtcaaaagaacctctca
gctatgaccgtgacacggagggagcagcacgtgaaccggtgcttggatgaggctgaaaag
gcactgagaccttccgtgcctcagatccctgaatgcccaatttgcggcaagccatttctc
accccaaagagcagaatcagtcacttgaaacagtgtgcggtgaagatggagattggcccg
cagctcctgctccaggccgtgcggctgcagacagctcagcccgagggggcctctggcaca
ctggcatcgagcctcagggatcacgctggaggtctgaagcggaagggagccactgccaag
aaggagccgcagaagaggcggaaggtcgccaagcccgaggcgccgtccgaggacctgctg
gtggccatggctctgtcccggtccgagatggagcaggaggctgtgccggcggcactcagg
ctgggaaacgctttttctgggaggacgagaccgggagcagctctagagaagaaaagccgc
aagaagagagcccccgttacgcccccgcagttgttagtccaggacgcagagaccacaggg
agacagatggaggatcgcgtggcccagctcttggcagaggagctggagctgtctggcacg
ccaccgcttcctgcgagcagaatttttaaggaagagctggaaaagggcaggcggggtctt
cgaccacctggaggaaagcagaactttctgtgggagggcagcgccctgaccggggcctgg
gctctggaatccttctacacggccagcctggtccctcccctggtgccccagcggcccgcc
gagggcctcacacaggagcccacgctgccactggagctgcctgagaagccagagcctggc
gtgcaaacaccccttgccgtccatggcacccgccctgtgggccacagccccctgagccca
gcgccctccgccagccagagggagcatcaggccctgcaggacctcctggacctggcagga
gaggggctgagcgccagcccgtggccctgcagcgggggcccggccggctcaggaggggcc
acaggaatggacttgttgcccagcagccttccactgactgggtttgtcctgccagccaag
gagaagtgcctggagaggagcggccaggcttcgctcgccctcggtttgctggtggccgac
ttcggtgccatggtcaacaacccacacctcagcgacatccagtttcagatggacggcggg
gaggtgctttatgcccacaagtttgtgctctatgcccgatgcccacttctcatgcagcac
gtaaacagtgaaggcttctttgcaatagaagatggtgacgtgaggacccagcgcgttctg
ctgagtgatgtcagcgccgaggctgcccggatgttcctgcgttatctctatgctgcggac
actgcccttactccccagctggcccctgacctgagctctctggcccacaggtttggcgtg
actgagcttgttcacctgtgcgaacaggtgcccgtcctgatggatgccgagggtggacag
cagaaggagcaggaagacgaggattgtgaaagcagagtggagactttccaagaactcctg
cggtcagtgtggcggggggaggaggaggaagcagaggctctgccgatatccgagggccga
gaagaagacagagaaaaggtgaatgaggcagagatggaagaaatttatgaatttgcagct
actcagcgaaagctgctccagggggagaaagctccagcgatggaggaagaaactgaccag
ctcagggaggacggtccagtttctgggggaatcctcacaagcgttcgcaataaagaacag
tcagaaaatgcagagcagatggaatcatctgggcaaggaagagatgaggccccagacaaa
tggaaaaacatgagacagtccacgctcctgccccccggggaccagggtttggacagggag
aagaaagcagagtccccaaaggaagcactggctcttccctactcttccagccctgcccgg
ggtcgggcagagaagcaggaaagcacctttttgtgctcagttgatgttgatgatgatgaa
cagtccttttcatcgcctcaagccagataccctgaaccctcccagatgacaagtgatcgc
aaggaaggaaactgcaccgtatgggaaagggagatagagagttcccatccccctgctcac
cagcaggcacctccctcacactcacccttcttcccatcacatccccatcaaggcaggagt
ccctgccggccacatcttcgttctcgtcacaccagtgacctatccctgccaacaccccag
ttgcagggcacggcttccagggtggcctcccagaactcatcaccaaagccaaagagggcc
agaagccttcccatgtcacgtaaggatccaggccagaaagacaaggaatgtagttccgtg
ttcaaacacagaggtaaaggggtcctgatctcccccgaaaagtctcctcccatggatcta
acccagtcagaacctggctgcttgagtgccaggtctcagaactctccatccagcgtgaac
agagaagatgaggtgatccttttattggattcagatgaagagctggagctggaacaaatc
aaaataaagtcagttttgaatggtccctcggaagaaaggaaagttcttgaagttagcacc
aagtcctctgagctgttttccatcattgacctcgatgcggagcaggaacattcccaaagc
ccaccaggaagagagcccacgctacagcaggaggtggagggaccgctggggaaccggggc
tctgtcggggacagagggaccccccagctgttctgcgaccccaagatcagtggcgacgag
gacagcacgacagatacctcgtggctggtgcccgccaccccactggctagcagaagccgt
gactgttcatcgcagacccaaatcacaggcctcaggtccaggccttcagcagacccactg
gctcagcccaagcccagggccctgttacagaacagggacgaaccggaagccatgagtaag
ttttcggtcatcgtgcctcagacatcctcactcctgggccacgtcgctcccggaagccct
gacagcagaaggcaggtctgcagaagcccgtccagtccccaccccagatgccaccagtac
ttttctcctctggctccccgttccagctcaggaggcctcgctgatctcactgggcagttc
cagaggcacccgccgcctgtgccgagcccaggggttcaggccactgcgagtgaagtggtg
gaggttgaggacagtgaggaggagcaggaggtggcctcccgaaaggcgagcaacatcccc
ctgccgggtagtgaccccccgatgccagcggacgattggtgttggcatgtggagcccctc
tcaccaattccgatcgaccacctgaacctcgagtggaccggccccctgagcaccagtagc
cctggcagtagggtggagggggccccggacagcggtgactgctgctccccagcactgctg
ggcaccacccccatccgaggaagctgcactggccagaggaaggctcaagagaaatcccct
ggggccggctcccctgggagcagcaggctgagctttctgaactcagctctgtgggacgat
tgggatggagaacagaagtccccagaggctcttcctctgccccagacaccgagcgcggat
ggagcccagaaattgcaagagttacagacgccaaaaggtgctaatcggaagaagaacttg
ccccccgaagtgcccataaccccaatgccaaggtattccatcatggagaccccggtgctg
aagaaagaactggacaggtttggggtccgccctctgcccaaacgccaaatggtcctgaaa
ctgaaggagatattccagtacactcaccagacactggagtcagactccgaggaagagagc
cagtcctcacagatgcccttggaggctccttgcagccagacttacaccaccaagacctct
aaggcttcaagggcagctggccgcacccagctggaggccacttctggtcctgttccccaa
aggtccaagggacctgctaagaacaagggcccccaacatcaaaagatgcagcctggtgga
agcatccctgccctgagcatgtcaccagccaaggaggggcctccaggccctgatggtgac
acccagctaccggcctcccaggaatccatggccacctctgtagacagcagtgacagctcc
tgcagctcacaaagttcttcctgtgagtttggagcggccttggagtctgcaggagaagat
gaggaggatgaggagagtgtcagtgcttcgcaggcggccatccagggagcggccacagag
gaggccgtgaggcattacatctgctccaagccagccctctaccgcaaggtcctgctgtac
cagcccttggagctggcagagctacaggccgagctgaagcagcaaggcatccacgtggcc
acggggaagctgctggacttcctggacacccagtgcatcaccttcaccacagctgccgcc
cgcaaggagaagcttgagaggaagagacggcagcccgtgggcaagaagacgggggtcaga
acccgcaggcctgtcccccgcccccaacccctggccatcagcagcctgtga
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integrated database retrieval system
