Balaenoptera acutorostrata scammoni (minke whale): 103018168
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Entry
103018168 CDS
T03086
Symbol
BRIP1
Name
(RefSeq) BRCA1 interacting protein C-terminal helicase 1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu03440
Homologous recombination
bacu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103018168 (BRIP1)
03460 Fanconi anemia pathway
103018168 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bacu03400
]
103018168 (BRIP1)
Enzymes [BR:
bacu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
103018168 (BRIP1)
DNA repair and recombination proteins [BR:
bacu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
103018168 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
103018168 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
ARCH_RTEL1
Motif
Other DBs
NCBI-GeneID:
103018168
NCBI-ProteinID:
XP_007190334
UniProt:
A0A384AT71
LinkDB
All DBs
Position
Un
AA seq
1239 aa
AA seq
DB search
MSSVCSEYTIGGVKINFPCKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCSA
LAWQQSLSGKPVDEGLSKKAEVPLSCCCTCHSKNFTNNDVNQGTSYHFNSPSTPPSERNG
TLSTCQDSPEKTTLSAKLSAKKQASRYRDENDDFQVEKKRIRPLETTQQIRKRHCFEKEV
HHLDAKVASGKTTKLNSPLGKINSFSPQNPPGNCSRCCCSTKQGNSQDSSNTAKKDHGGK
SKIPKIYFGTRTHKQIAQITRELRRTAYSGVPMTILSSRDHTCVHPEVVGNFNRNEKCME
LLDGKNGKSCYFYHGVHKISDQHVLQTLQGMCKAWDIEEFVSLGKKLKACPYYTARELMQ
DADIIFCPYNYLLDAQIRESMDISLKEQVVILDEAHNIEDCARESASFSVTEVQLRFARD
ELDSMVNNNIRKKDHEPLRAVCYSLINWLEANSEHLVERGYESSCKVWSGSEMLLNLYKM
GITTATFPILQGHFSAILQKEEKVSSVHGKEEAIEVPIISASTQIMLKGLFMVLDYLFRQ
NSRFADDYKVAIQQTYSWINQTDISDKNGFLVLPKNKKRLREKTAVHVLNFWCLNPAVAF
SDINGKVWTIVLTSGTLSPMKSFSSELGVTFTIQLEANHVINNSQVWVGTIGSGPKGRNL
CATFQHTETFEFQDEVGALVLSVCQTVSQGILCFLPSYKLLEKLKERWLSTGVWHNLELV
KTVIVEPQRGEKTDFDELLQVYYDAIKYKGEKDGALLVAVCRGKVSEGLDFSDDNARAVI
TIGIPFPNVKDLQVELKRQYNDQHSKLRGLLPGRQWYEIQAYRALNQALGRCIRHKNDWG
ALILVDDRFRSNPSRYISGLSKWVRQLIQHHSTFESALESLAEFSKKHQKVNDIYKEERK
SIQDNESTLAVACLKDNTSTYLLEAASHLSPEYPREGKVKMCLXELQYPKMIDKSPSLPR
GIISRKEKNDPLLLEESAQAVGAEKIVISRSTSPTFNKQTNRVSWSGSNFLEQYLTGKIL
TGTPKFRSSEDCDSNSSTFKTEKGCEAVLPLTGKYESSSLTVNTSLGPCPQSETIVPSIR
INATLLNPEDPDIQLSLVCEEAELSTSNTAFETEAEDESIYFTPELYDPIDTNEEKNELV
GTDRDNRLANNSNCILAEDLFEIKTMKGVDSVREMKAEDCTGTKLNRLMHIKESKVDDIG
SNVKTTHINELELGKTHETDIKNFKQSPSKNKDVFPGVR
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagtatgttctgagtatacaattggtggggtgaagattaactttccttgtaaa
gcttatccatcacagcttgctatgatgaattctattgtcagaggattaaatagtaagcag
cattgtttgttggagagccccacagggagtgggaaaagcttagccttactttgctctgct
ttagcatggcaacaatctcttagtgggaagccagtggatgaaggcttaagtaaaaaagct
gaagtaccattgtcgtgttgttgtacatgccattcaaagaattttacaaacaatgacgtg
aaccagggaacttcatatcatttcaacagtccaagtacaccgccttctgaaagaaatggc
actttgtcaacttgtcaagactctcctgaaaaaactacactgtctgcaaagctatctgct
aagaaacaggcatccaggtacagagatgaaaatgatgattttcaagtagagaagaaaaga
attcgacccttagagactacacagcagattagaaaacgtcattgttttgaaaaggaggtg
caccatttggatgcaaaagttgcttcaggaaagaccacaaaactcaactccccattagga
aagataaactccttttctccacaaaatccccctggtaactgttctaggtgctgttgttct
actaaacaaggaaacagtcaagattcttcaaataccgctaagaaggatcatggggggaag
tccaagatacccaaaatatattttgggacacgcacacacaagcagattgctcagattact
agagagctccggaggacagcatactcaggggtcccaatgactattctttccagcagggat
cacacttgtgtccatcctgaagtagtaggtaacttcaacagaaatgaaaagtgcatggaa
ttgctagatggaaaaaatggaaaatcctgctatttttatcatggtgttcataaaattagt
gatcaacacgtattacagactctccaagggatgtgcaaggcctgggatatagaagaattc
gtcagcttggggaaaaaactaaaggcatgtccatattacacagcacgagaactaatgcaa
gatgctgacataatattttgtccctacaactatcttctagatgcacaaataagggaaagt
atggatatcagtctgaaagaacaggttgtcattttagatgaagctcataacattgaggac
tgtgctcgggaatcagcaagtttcagtgtaacggaagttcagcttcggtttgctcgggat
gaactagatagtatggttaacaataacataaggaagaaagaccatgaacccctgcgagct
gtgtgctatagcctcattaattggttagaagcaaactctgaacatcttgtggaaaggggt
tatgaatcatcctgtaaagtatggagtggaagtgaaatgctcttaaatttatacaaaatg
ggcataaccactgctacttttcccattttgcagggacatttttctgctatccttcaaaaa
gaagaaaaagtctcatcagttcatggtaaagaggaggcaatagaagtacctattattagt
gcttcaactcaaataatgctcaaaggactttttatggtgcttgactatctttttaggcaa
aatagcagatttgcagatgattataaagtcgctattcaacagacttactcttggataaat
cagactgatatttcagataaaaatgggttcttggttctaccaaaaaataagaaacgttta
cgagagaaaacagcagttcatgtgctgaatttttggtgcttaaatccagctgtggccttt
tcagatattaatggcaaggtttggacgattgttttgacatctgggacattatcaccaatg
aaatccttttcatcagaacttggtgttacatttactatccaactggaggctaatcatgtc
attaataactcacaggtttgggttggcaccattgggtcaggccccaagggtcgcaatctc
tgtgctaccttccagcacacggaaacatttgagttccaggatgaagtgggagcacttgtg
ttatctgtgtgccagactgtgagccaaggaattttgtgtttcctgccatcttacaagtta
ttagaaaagttaaaagaacgttggctctccactggtgtatggcataatctggagttggtg
aagacagtcattgtagaaccacagagaggagaaaaaactgattttgatgaattactgcag
gtgtactatgatgcgatcaagtacaaaggagaaaaagatggtgccctcctggtggcagtt
tgtcgtggtaaagtgagtgagggtctggatttctcagatgacaacgcccgtgctgtcata
acaataggaattccttttccaaatgtgaaagatctacaggttgaactaaagcgacaatat
aatgaccagcattcaaaattaagaggtcttttaccaggtcgtcaatggtacgaaattcaa
gcatacagggccttaaaccaggccctaggtaggtgtattcgacacaaaaatgattgggga
gctcttattctagtggatgatcgcttcaggagtaacccaagtcgatacatatctggactt
tctaagtgggttcggcagctgattcagcaccattcaacctttgagagtgcgctggagtcc
ttggctgaattttccaaaaagcaccaaaaggtcaatgatatatacaaagaagaaagaaaa
tctatacaggacaatgagtctacgcttgcagtggcttgtttgaaggataatacctcaact
tatttattagaagcagcaagccatctatcaccagagtatcctagggaaggtaaagtaaaa
atgtgtctannagagctacaatatcctaaaatgatagataaaagtccatctttaccaaga
ggcatcatctccagaaaggagaaaaatgatccattattgttggaagagtctgcccaggca
gtaggagcagaaaaaattgtgatttccagatccacaagcccaaccttcaacaaacaaaca
aacagagttagctggtctggcagtaattttctggaacagtatcttactggtaaaattctg
actggaacacctaagtttaggtcatcagaggactgtgactctaattcttccactttcaaa
acagaaaaaggatgtgaagcagttttgccactcactggtaaatatgagtcctcctctctg
acagtaaacacatcacttggaccatgccctcaatcagaaaccattgttccatcaataagg
attaatgctactcttctgaatccagaagatccagacattcagttgtctctagtatgtgaa
gaagctgaactttctacttcaaatacagcttttgaaacagaagcagaggatgaatctatc
tattttacacctgaactttatgatcccatagatacaaatgaagaaaagaatgaactagtt
ggaactgatagagacaacagattggctaataattcaaattgcattttagctgaagatctt
tttgaaattaaaactatgaaaggagtggattcagtcagagaaatgaaagctgaggattgc
acaggcacaaagttgaatagactcatgcatattaaagaaagtaaagttgatgacattggt
agtaatgtaaaaacgactcatataaatgaattggaactgggaaaaactcatgaaacggat
ataaagaactttaaacagtctccttccaaaaataaagatgtgttccctggtgttaggtaa
DBGET
integrated database retrieval system
