Balaenoptera acutorostrata scammoni (minke whale): 103018342
Help
Entry
103018342 CDS
T03086
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu03082
ATP-dependent chromatin remodeling
bacu04714
Thermogenesis
bacu05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103018342 (SMARCC1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
103018342 (SMARCC1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
103018342 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bacu03021
]
103018342 (SMARCC1)
03036 Chromosome and associated proteins [BR:
bacu03036
]
103018342 (SMARCC1)
Transcription machinery [BR:
bacu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103018342 (SMARCC1)
Chromosome and associated proteins [BR:
bacu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103018342 (SMARCC1)
PBAF complex
103018342 (SMARCC1)
GBAF(ncBAF) complex
103018342 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
SWIRM-assoc_2
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
Chromo
BRCT_2
DUF919
SpeFL
Motif
Other DBs
NCBI-GeneID:
103018342
NCBI-ProteinID:
XP_007168889
UniProt:
A0A383Z1X6
LinkDB
All DBs
Position
Un
AA seq
996 aa
AA seq
DB search
MDFKAGGTLCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQSNCLTRPN
IYLIPDIDLKLANKLKDIIKRHQGTFTDEKSKASHHIYPYPSSQEDEEWLRPVMRKDKQV
LVHWGFYPDSYDTWVHSNDVDAEIEDPPIPEKPWKVHAKWILDTDVFNEWMNEEDYEVDE
NRKPVSLRQRISTKNEEPVRSPERRDRKASANARKRKHSPSPPPPTPTESRKKSGKKGQA
SLYGKRRSQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLD
EQDEETVTTGGKEDEDPGKGDQSRSVDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERR
ALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFL
EQWGLVNYQVDPESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQVPAAQQMLNFPEKN
KEKPIDLQNFGLRTDIYSRKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHV
GSRTQDECILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPR
VASAAARAALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDE
PEKLEGAEEEKMETDTDGQQPEKAENKGENEMDEGDKAQDGENEKNSEKEQDSEVSEDIK
SEEKETEENKELTDTCKERESDIGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEE
RKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKY
AELRARQQMEQQQHGQNPQQAHQHSGGPGLAPLGAAGHPGMMPHQQPPPYPLMHHQMPPP
HPPQPGQIPGPGSMMPGQPMPGRMMSTVAANIHPPGSGPTPPGMPPIPGNILGPRVPLTA
PNGMYPPPPQQQPPPPPPADGVPPPPAPGPPASAAP
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaaagctggaggcaccttgtgtcacattcttggggctgcttacaaatataaa
aatgaacagggatggcggaggtttgatctacagaatccatcgcgaatggatcgtaatgtt
gaaatgtttatgaacattgaaaaaacattggtgcagagcaattgtctgaccagacccaac
atctacctcattccagacattgatctgaagttggctaacaaattgaaagatataatcaaa
cgacatcaggggacatttactgatgagaagtcaaaagcttcccaccacatttatccatat
ccttcctcacaagaggatgaagagtggttgagacctgtgatgagaaaagacaagcaggtg
ttagtgcattgggggttttacccagacagctatgatacttgggtccatagtaatgatgtt
gatgcggaaattgaagatccaccaattccagaaaagccatggaaggttcatgcaaaatgg
attttggacactgatgttttcaatgaatggatgaatgaggaggattatgaggtggatgag
aacaggaagcccgtgagtttgcgtcagcgaatttcaacaaagaatgaagagccagtcaga
agtccagagagaagagatagaaaagcatcagctaatgctcgaaagaggaaacattcacct
tcccctccacctcccacaccgacagaatcccggaagaagagtgggaagaaaggccaagct
agtctttatgggaagcggagaagtcagaaagaggaagatgagcaagaagatcttaccaag
gacatggaagacccaacacctgtacccaacatagaggaggtggttcttccaaaaaatgta
aacccaaagaaagatagtgaaaatacacctgttaaaggaggaactgtagcagatctagat
gagcaggatgaagaaacagtcacaacaggaggaaaggaagatgaagatcctggcaaaggt
gatcagagtcggtcagttgaccctggtgaagataatgtgacagagcagaccaatcacatt
attattcctagctatgcatcgtggtttgattataactgtattcatgtgattgaacggcgt
gctcttcctgagtttttcaatggaaaaaacaaatccaagactccagagatatacttggca
tatcgaaattttatgatcgacacataccgcctaaatccccaggaatatttaaccagcact
gcttgtcggaggaacttgactggagatgtatgtgctgtgatgagggttcatgccttttta
gagcagtgggggcttgttaattaccaagtggatccagaaagtcgacccatggcaatggga
cctcctccgactcctcatttcaatgtattagctgataccccctctgggcttgtacctcta
catcttcgatcacctcaggttcctgctgctcagcagatgttaaattttcctgagaagaac
aaggaaaaaccaattgatttgcagaactttggtcttcgtactgacatttactccaggaaa
accttagcaaagagtaaaggtgctagtgctggaagagaatggactgaacaggagacactt
ctactactggaggctctggagatgtataaggatgattggaacaaagtgtcagaacacgtt
ggaagtcgcactcaggatgaatgcatcctccactttttgagacttcccattgaggaccca
taccttgagaattctgatgcttccctggggcccctggcctaccagcctgtccccttcagt
cagtcaggaaacccagtcatgagcactgttgcttttttggcgtctgtggtggatcctcgt
gtggcatctgctgcagccagagcggctttggaagagttttctcgagtccgggaggaggtg
ccactggaattggtggaagctcacgtcaagaaagtacaagaagcagcacgagcctctggg
aaagtggatcccacctatggtttggagagcagctgcattgcaggcacagggccagatgag
ccagagaagcttgaaggagctgaagaggaaaaaatggaaacagatactgatggtcagcag
cctgaaaaggcagaaaacaaaggggagaatgaaatggatgaaggtgataaagctcaagat
ggagaaaatgaaaaaaatagtgagaaagaacaggatagtgaagttagtgaagatatcaaa
tcagaagaaaaggagactgaagagaacaaggaactcactgatacttgtaaagaaagagaa
agtgatattgggaagaagaaagtagaacatgaaatttctgaaggaaatgtagccacagcc
gcagcagctgctcttgcctcagctgcaaccaaagccaagcacttggctgccgtggaagag
agaaagatcaagtctctggtagctctcctggttgagacacaaatgaagaaactggagatc
aaacttagacattttgaggaactggaaaccatcatggacagagagaaagaagctttagaa
caacagaggcagcagttgcttactgaacgccagaacttccacatggaacagctgaaatac
gctgagttgcgagcccgacagcaaatggaacagcagcagcatgggcagaaccctcaacag
gcacaccagcactcaggaggacctggcctggcaccactgggagcagcagggcaccctggc
atgatgcctcatcagcagccccctccctaccctctgatgcaccaccagatgccgccgcct
catccaccccagccaggtcagataccaggtccaggttccatgatgcctgggcagcccatg
ccaggccgcatgatgtccaccgttgcagccaacatccacccccctgggagtggccctacc
cctcctggtatgcctccaatcccaggaaacatcttaggaccccgggtacccctcacggca
cctaacggcatgtatccccctccgccgcagcagcagccacctcctccaccacctgcagat
ggagtccctccgcctcccgctccaggcccaccagcctcggctgcaccctag
DBGET
integrated database retrieval system
