Balaenoptera acutorostrata scammoni (minke whale): 103018835
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Entry
103018835 CDS
T03086
Symbol
TNPO1
Name
(RefSeq) transportin 1
KO
K18752
transportin-1
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103018835 (TNPO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bacu03019
]
103018835 (TNPO1)
03009 Ribosome biogenesis [BR:
bacu03009
]
103018835 (TNPO1)
Messenger RNA biogenesis [BR:
bacu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
103018835 (TNPO1)
Ribosome biogenesis [BR:
bacu03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
103018835 (TNPO1)
Pre-60S particles
103018835 (TNPO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
TPR_IMB1
HEAT_2
Arm
Vac14_Fab1_bd
IBN_N
Cnd1
TOR1L1_N
HEAT_EF3_N
TPR_IPO5
HEAT_MROH2B_C
TPR_DNAAF5
Adaptin_N
PDS5
MMS19_C
CEP104-like_TOG
HEAT_GCN1_C
INTS7_N
HEAT_Maestro
UNC45-central
HEAT_GCN1_C_2
Dopey_N
TPR_TTI1_C
RTP1_C1
VPS15-like_hel
HEAT_DAAF5
ARM_TBCD
DUF3689
Motif
Other DBs
NCBI-GeneID:
103018835
NCBI-ProteinID:
XP_007176002
UniProt:
A0A9B0ZK28
A0A383ZMA0
LinkDB
All DBs
Position
Un
AA seq
890 aa
AA seq
DB search
MEYEWKPDEQGLQQILQLLKESQSPDTTIQRTVQQKLEQLNQYPDFNNYLIFVLTKLKSE
DEPTRSLSGLILKNNVKAHFQNFPNGVTDFIKSECLNNIGDSSPLIRATVGILITTIASK
GELQNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDVLDRPLNIMIPKFL
QFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFIENLFALAGDEEPEVQKNVCQALV
MLLEVRMDRLLPHMHNIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDVLIRHLPKL
IPVLVNGMKYSDIDIILLKGDVEEDETIPDSEQDIRPRFHRSRTVAQQHDEDGIEEEDDD
DDEIDDDDTISDWNLRKCSAAALDVLANVYRDELLPHILPLLKELLFHHEWVVKESGILV
LGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDTYLKP
LMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKNLLI
LYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSSVATALQSG
FLPYCEPVYQRCVNLVQKTLAQAMLNNAQPDQYEAPDKDFMIVALDLLSGLAEGLGGNIE
QLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNPE
FISVCNNATWAIGEISIQMGIEMQPYIPMVLHQLVEIINRPNTPKTLLENTAITIGRLGY
VCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPSGVIQDFIFFCDAVA
SWINPKDDLRDMFCKILHGFKNQVGDENWRRFSDQFPLPLKERLAAFYGV
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggagtatgagtggaaacctgacgagcaagggcttcagcaaatcctgcagctgctgaag
gagtcccagtcccccgacaccaccatccagagaaccgtgcaacaaaaactggaacaactc
aatcaatatccagactttaacaactacctgatttttgttcttacaaaattaaaatctgaa
gatgaacccacaagatcattgagtggtctcattttgaagaataacgtgaaagcacacttt
cagaacttcccaaatggtgtaacagactttattaagagtgaatgtttaaacaatatcggt
gactcctctcctttgattagagctactgtaggtattttgattacaactatagcttccaag
ggagaattgcagaattggcctgacctcttaccaaaactctgtagcctgttggattctgaa
gattacaacacttgtgagggagcatttggtgcccttcagaagatttgtgaagattctgct
gagattttagatagtgatgttttagatcgtcctctcaacatcatgattcctaaattttta
caattcttcaagcacagtagtccaaaaataaggtctcatgctgttgcctgtgtcaatcag
tttatcatcagtaggactcaggctctgatgttgcacattgattcctttattgagaatctc
tttgcattggctggtgatgaagaaccagaggtacagaaaaatgtgtgccaggcacttgtg
atgttgcttgaagttcgaatggatcgcctgcttcctcacatgcataatatagttgagtac
atgctgcagaggacccaagatcaagatgaaaatgtggctttagaagcctgcgaattttgg
ctcactttggctgagcaaccaatatgcaaagatgtactcataaggcatcttcccaagttg
attcctgtgttagtgaatggcatgaagtactcagatatagatatcatcctacttaagggt
gatgttgaagaagatgaaacaattcctgatagtgaacaggacataaggccacgttttcat
cgatcaaggacagtggctcagcagcatgatgaagatggaattgaagaggaagatgatgat
gacgatgaaattgatgatgatgatacaatttctgactggaatctaagaaaatgttctgcg
gctgccctagatgttcttgcaaatgtgtatcgtgatgagcttttgccacatattttgccc
cttctgaaagaattactttttcatcatgaatgggttgttaaagaatcaggcatcttggtt
ttaggagcaattgctgaaggttgcatgcagggcatgattccatacctacctgagctcatt
cctcaccttattcagtgcctctctgataaaaaggctcttgtgcgttccataacgtgctgg
actcttagccgctatgcacactgggtagtcagccagcccccagacacgtacctgaagcca
ttaatgacagaactgctaaagcgtatcctggatagcaacaagagagtacaagaagctgcc
tgcagtgcctttgctaccctggaagaggaggcttgtacagaacttgttccttaccttgct
tatatacttgataccttggtctttgcatttagtaaataccagcataaaaacctgctcatt
ctttatgatgccataggaacattagcagattcagtaggacatcacttaaacaaacctgaa
tatattcagatgctaatgcctccactgatccagaaatggaacatgttaaaggatgaagat
aaagatctcttccctttacttgagtgcctatcttcagttgccacagccctgcagtctggc
ttccttccatactgtgaacctgtgtatcagcgttgtgtaaacctagtacagaagactctt
gcacaagcaatgctgaacaatgctcaaccagatcagtatgaggctccagataaagatttt
atgatagtggctcttgatttactcagtggcctggctgaaggacttggaggcaacattgaa
cagctagtagcccgaagtaacattctaacactaatgtatcagtgcatgcaggataaaatg
ccagaggttcgacagagttccttcgccctgttaggtgatctgacaaaagcttgctttcag
catgttaagccttgtatagctgatttcatgccaatattgggaaccaacctaaatccagag
ttcatttcagtctgcaataatgctacatgggcaattggagaaatctccattcaaatgggt
atagagatgcagccttatattcctatggtgttgcaccagcttgtagaaatcattaacaga
cccaacacaccaaagacgttgttagagaatacagcaataacaattggtcgtcttggttac
gtttgtcctcaagaggtggcccccatgctacagcagtttataagaccctggtgcacctct
ctgagaaacataagggacaatgaggaaaaggattcagcatttcgtgggatttgtaccatg
atcagtgtgaatcccagtggagtaatccaagattttatatttttttgtgatgctgttgca
tcatggattaatccaaaagatgatctgcgagacatgttctgtaagatccttcatggattt
aaaaatcaagttggggatgaaaattggaggcgtttctctgaccagtttccacttccctta
aaagagcgtcttgcagctttttatggtgtttaa
DBGET
integrated database retrieval system
