Balaenoptera acutorostrata scammoni (minke whale): 103018844
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Entry
103018844 CDS
T03086
Symbol
CHD1
Name
(RefSeq) chromodomain helicase DNA binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bacu03021
]
103018844 (CHD1)
03036 Chromosome and associated proteins [BR:
bacu03036
]
103018844 (CHD1)
Transcription machinery [BR:
bacu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
103018844 (CHD1)
Chromosome and associated proteins [BR:
bacu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
103018844 (CHD1)
SLIK complex
103018844 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
103018844
NCBI-ProteinID:
XP_007197553
LinkDB
All DBs
Position
Un
AA seq
1687 aa
AA seq
DB search
MNGHSDEESVRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGS
QSESESDNSRENKVQAKPPKVDGAEFWKSSPSILAVQRSAMLKKQQQQQHQASSNSGSEE
DSSSSEDSDDSSSEVKRKKHKDEDWQMSGSGSPSQSGSDSESEEERDKSSCDETESDYEP
KNKVKSRKPQNRSKSKNGKKIIGQKKRQIDSSEEEEEDEEDYDNDKRSSRRQATVNVSYK
EDEEMKTDSDDLLEVCGEDVPQPEEEEFETIERFMDCRIGRKGATGATTTIYAVEADGDP
NAGFEKNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWL
KNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSW
EDGTLFKDCKVLKQRPRFVALKKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILA
DEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDI
NSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSL
LYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGKGREYGYAS
LHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGST
SGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGN
RVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTR
AGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILER
AKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNKEELSAILKFGAEELFKEPEGEEQ
EPQEMDIDEILKRAETHENEPGPLTVGDELLSQFKVANFSNMDEDDIELEPERNSKNWEE
IIPEDQRRRLEEEERQKELEEIYMLPRMRNCAKQISFNGSEGRRSRSRRYSGSDSDSVSE
RKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLERLDAIARDAELVDKSETDL
RRLGELVHNGCIKALKDNSSGTERTGGRLGKVKGPTFRISGVQVNAKLVISHEEELIPLH
KSIPSDPEERKQYIIPCHTKAAHFDIDWGKEDDSNLLIGIYEYGYGSWEMIKMDPDLSLT
HKILPDDPDKKPQAKQLQTRADYLIKLLSKDLARKEAQRLSGAGGSKRRKVRAKKNKAMK
SIKMKEEIKSDSSPLPSEKSDEDDDKLSESKSDSKERSKKSSVSDAPVHITASGEPVPIS
EESEELDQKTFSICKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLK
EYTNPEQIKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQNNDQNSNLNTQVIR
NPDVERLKENTNHDDSSRDSYSSDRHLSQYHDHHKDRLQGDSYKKSDSRKRPYSSFSNGK
DHRDWDHYKQDSRYYSDREKHRKLDDHRSRDHRSNLEGSLKDRTHSDHRSHSDHRLHSDH
RSSSEYTHHKSSRDYRYHSDWQLDHRASSSGSRSPLDQRSPYGSRSPFEHSIEHRSTPEH
TWSSRKT
NT seq
5064 nt
NT seq
+upstream
nt +downstream
nt
atgaatggacacagtgatgaagaaagtgttagaaacagtagtggagagtcaagccagtcg
gatgatgattctgggtcagcgtcaggctctggatctggttcaagttctggaagcagtagt
gatggaagcagtagccagtcaggtagcagtgactctgactctggatccgaatcgggcagt
cagtcagagtctgagtcagacaattcccgagaaaataaagttcaagcaaaaccaccgaaa
gttgatggagctgagttttggaaatctagccctagtattctggctgttcagagatctgca
atgctcaagaagcagcagcagcagcaacatcaagcttcatctaatagtggatcagaagag
gattcttctagcagtgaagattccgatgactcatcgagtgaggtcaaaaggaaaaagcat
aaagatgaagattggcagatgtctgggtcaggatctccatctcagtctggttcagattca
gaatctgaagaagaaagagataaaagtagttgtgatgaaacagaatctgattatgagcca
aaaaacaaagttaaaagtagaaaacctcaaaatagatctaagtcaaaaaatggaaaaaag
attattggacaaaaaaagagacagattgattcatctgaggaggaggaggaggatgaagaa
gactatgataatgataaaagaagctctcgtcgacaagcaactgtcaatgttagctataag
gaagacgaagaaatgaaaacagattctgatgacctacttgaagtctgtggagaggatgtt
cctcaacccgaggaagaggaatttgaaacaatagaacggtttatggattgtcggattggg
agaaaaggagctactggtgctactacaaccatctatgcagttgaagcagatggtgaccca
aatgcaggatttgaaaaaaacaaggaaccaggagagatccagtatttaattaaatggaaa
ggatggtcacatatccacaatacttgggagacagaagaaacccttaagcagcagaatgtt
agaggaatgaaaaaattagataattataagaaaaaagatcaggaaacaaaaagatggttg
aaaaatgcttctccagaagatgtggaatattataattgccagcaagaacttacagatgat
ctccataagcagtatcaaatagtggagcgaataattgctcattccaatcaaaagtcagct
gctggctatcctgattattattgcaaatggcagggccttccatactcagagtgcagctgg
gaagatggaactctttttaaagactgcaaagttttaaaacaaaggccaagatttgtagcc
ctaaagaagcagccatcctatattggaggacatgagggattagaattaagagattatcaa
ctgaatggtttaaattggcttgctcactcttggtgcaaaggaaatagttgcatacttgct
gatgaaatgggccttggaaaaacaatacagacgatctcatttctgaactatttgtttcat
gaacaccaattatatggaccttttctattagtagtaccactctccactctcacttcctgg
caaagggagattcaaacatgggcttctcaaatgaatgctgtggtttatttaggtgacatc
aacagcagaaacatgataagaactcatgaatggatgcatccccagaccaaacggttaaaa
tttaatatactgttaacaacttatgaaatcttattgaaggataaggcattccttggaggt
ctaaattgggcatttataggtgtagatgaagcacatcgattaaagaatgatgattctctt
ctgtataaaactttaatagattttaagtccaatcaccgtcttcttatcactggaactcct
ctgcaaaactccctcaaagagctctggtctttgctacatttcattatgccagaaaagttt
tcttcctgggaagattttgaagaagaacatggcaaaggcagagaatatggttatgcaagc
ctccacaaggagcttgagccatttctgttacgcagggttaagaaagatgtggaaaaatct
cttcctgccaaggttgagcagattttaagaatggaaatgagtgctttacagaaacaatat
tacaaatggatattaactagaaattacaaagccctcagcaaaggttccaagggcagtacc
tcaggctttttgaatattatgatggagctaaagaaatgttgtaaccattgctacctcatt
aaaccaccagataataatgaattctataataaacaggaggccttacaacacttaatccgt
agtagcggaaaattaattcttcttgacaaactgttaattcgcctaagagagcgaggcaat
agagttcttattttttctcaaatggtgcggatgttagatatacttgcagaatatttgaag
tatcgtcaattcccctttcaaagattagatgggtcaataaaaggggagctgaggaaacaa
gctctagatcattttaatgctgaaggatcagaggatttctgctttttgctttccacaaga
gctggaggtttaggaattaacttagcctcagctgacactgttgttatatttgattctgat
tggaatccacaaaatgatcttcaggcacaggctagagctcatcgaattgggcaaaagaaa
caggtgaacatttatcgtctagttacaaagggatcagttgaagaggatattcttgaaagg
gccaaaaagaagatggttttagatcatcttgtgattcaaagaatggacacaactgggaag
acagtattacacacaggttctgctccctcaagttctactcctttcaataaagaagagtta
tcagccattttaaagtttggtgctgaggaactttttaaggagcccgagggagaagaacaa
gagccccaggaaatggatatagatgaaatcttgaagagggctgaaactcatgaaaatgaa
ccaggacctttaactgtaggagatgaattactttctcagttcaaggttgccaacttttca
aatatggatgaggatgacattgagttggaacctgaaagaaattcaaagaattgggaagaa
atcattcctgaagatcaaagaagacgattagaagaggaagaaagacaaaaggaacttgaa
gaaatttatatgctccccagaatgagaaactgtgcaaaacagattagtttcaatggaagt
gaagggaggcgcagtagaagtaggagatactctggatctgatagtgattcagtctcagaa
aggaaaaggccaaagaaacgtggaagaccacgaactatccctcgggaaaatattaaagga
tttagtgatgcagaaattcggcggtttatcaagagttacaagaaatttggtggccctctg
gaaagattagatgcaattgctcgagatgctgaattagttgataagtcagagacagacctc
agacgactaggagaattggtacataatggttgcattaaagctttaaaggacaattcttca
ggaacagaacgaacaggtggtagacttggaaaagtaaagggtccaacattccgaatatca
ggagtacaggtgaatgccaagctagtcatctcccatgaagaagaattaataccgttgcac
aaatccattccttcagatccagaagaaagaaagcagtatatcatcccatgccacacgaag
gcagctcattttgatatagactggggcaaagaagatgattccaatttgttaattggtatc
tacgaatacggatatggaagctgggaaatgattaaaatggatcctgacctcagtctgaca
cacaagattcttccagatgatcctgataaaaaaccacaagcaaaacagttacagacacgt
gcggactacctcatcaaattacttagtaaagatcttgcaagaaaagaagctcagaggctt
tctggtgcaggaggttcaaaaaggaggaaagtaagagctaagaagaataaagcaatgaag
tctataaaaatgaaagaggaaataaagagcgattcttctcccctgccctcagaaaagtct
gatgaagatgatgataagttgagtgaatccaagtctgatagcaaggaaagatctaagaaa
tcttcagtgtcggatgctccagttcatatcactgcaagtggtgaaccagttcccatatct
gaagaatctgaagagctagatcagaagacattcagcatatgtaaagaaagaatgaggcct
gtcaaagcagctttgaagcaacttgataggcccgagaaaggcctttcagaaagagaacaa
ctggaacatactagacagtgcttaataaaaattggagaccatatcacagaatgtctgaaa
gagtatacaaatcctgaacaaatcaagcagtggagaaaaaacctgtggatttttgtatct
aagtttactgagtttgatgcaagaaaattacataaattatataagcatgctattaaaaaa
cggcaggaatctcagcaaaataatgaccagaacagcaacttgaatactcaagtgattaga
aatccagatgtggaaagattaaaagagaatacaaatcatgatgatagcagcagggacagt
tactcatctgataggcacttatctcaatatcatgatcatcataaagaccgacttcaggga
gattcttataaaaagagtgactctaggaaaagaccctattcgtcttttagtaatggtaaa
gatcatcgtgattgggatcactacaagcaagacagcagatactatagtgatagagagaaa
cacagaaaactggatgatcacaggagtagagaccacaggtcaaatttggaaggaagttta
aaagacagaactcattctgatcatcgttctcattcagatcatcggttgcattcagaccat
cggtcaagttctgaatatacacaccataaatcttccagggattataggtatcactcagat
tggcaattggaccatagagcttccagtagtggctctagatcaccactagatcagaggtct
ccttatggctccagatctccatttgaacactcaattgaacacagaagtacacctgagcat
acctggagtagtcggaaaacataa
DBGET
integrated database retrieval system
