Balaenoptera acutorostrata scammoni (minke whale): 103019226
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Entry
103019226 CDS
T03086
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu03030
DNA replication
bacu03410
Base excision repair
bacu03420
Nucleotide excision repair
bacu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103019226 (RFC1)
03410 Base excision repair
103019226 (RFC1)
03420 Nucleotide excision repair
103019226 (RFC1)
03430 Mismatch repair
103019226 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bacu03032
]
103019226 (RFC1)
03400 DNA repair and recombination proteins [BR:
bacu03400
]
103019226 (RFC1)
DNA replication proteins [BR:
bacu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
103019226 (RFC1)
DNA repair and recombination proteins [BR:
bacu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
103019226 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
PTCB-BRCT
Rad17
AAA_5
AAA_22
BRCT_2
AAA_14
RuvB_N
AAA_17
AAA_7
AAA_30
AAA_16
AAA_18
nSTAND3
AAA_33
Zeta_toxin
RNA_helicase
NTPase_1
AAA_19
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
103019226
NCBI-ProteinID:
XP_007178875
LinkDB
All DBs
Position
Un
AA seq
1146 aa
AA seq
DB search
MDIRKFFGVIPSGKKVVSETAKKNEKTKSAEETIKAKKGIKEIKVKSSCKEDDFKQKQPN
KKKRIIYDSDSESEETVQVKNSKKRPEKLPLSSKPAKIRHQDPVTYISETDEEDDFVCKK
AASKSKENGGSPNSYLGASNMKKNEENTKTLNTKNKPLSPMKLTPTSVLDYFGTASVQRS
DKKMVASRRKEPSQNADDSRLNDEAIAKQLQLDEDAELERQLHEDEEFARTLAMLDEEPK
TKKAQKDPGERETFSSVQASLYKAEKPKYHHKEQFSDNRNNSSPKKQTKCESSKESEKHS
RSSTHKIGETSSPKTSSKLTLLKKKEESSNKETEPLASKRKENAIELKETRTPKKIKSSP
AKKESISPEDSEKRRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLTFVITGVLESI
ERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGLLNLIRT
MPGKKSKYEIAAEAEMKKEKSKLERTPQKNDQGKRKISPTKKESESKKCKLTPKKESSIK
SIKKETSMFQRGLHFKEQVAEETNGDSWARNLADDSSENKAENLLWVDKYKPASLKTIIG
QQGDQSCANKLLRWLQNWHKSPSEDKKHAAKFGKFAGKDDGSSFKAALLSGPPGVGKTTT
ASLVCQELGYSYVELNASDTRSKNSLKEIVAESLNNTSIKGFYSSGAARSVGTKHALIMD
EVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQI
KGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRA
KKDIKMGPFDVARKVFVTGEETAHMSLVDKLDLFFYDYSIAPLFVQENYIHVKPVAAGGD
MKKHLMLLSRAADSISDGDLVDRQIRNKQNWSLLPTQAIYASVLPGELMRGYMTQFPTFP
SWLGKHSSMGKHDRIVQDLALHMSLRTYSSKRTVNVDYLSHIRDALVQPLTSQGIEGVQD
VVALMDTYYLMKEDFENIMEISSWGDRPSPFSKLDPKVKAAFTRAYNKEVHLIPYSLQAV
KIHRHSTGPALDSEYNEELNEDDSQSDEKDQDTLETDAMIKKKTKSSKPSKSEKESRKGK
GKSSKK
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atggatattcgaaaattctttggggttataccaagtggaaagaaagttgtaagtgaaaca
gcaaagaagaatgagaaaactaagtctgctgaagaaactataaaagcaaagaaaggaata
aaggaaatcaaggtaaagagttcttgtaaagaagatgacttcaagcagaagcaaccaaac
aagaaaaagaggatcatctatgattcagattcagaatcagaggagacagtgcaggtaaaa
aactccaaaaagcgaccagaaaaattgccactgtcttctaaacctgctaaaattcgacac
caggatcctgttacatacatttcagaaacagatgaagaagatgactttgtgtgcaagaag
gcagcctctaagtcaaaagagaatggaggatctccaaatagttatcttggagcatcaaac
atgaaaaagaatgaagaaaacactaagacactaaacactaagaataagcctttgtcaccg
atgaaacttacccccacatcagtgcttgattattttggaacggcaagtgtccaaagatcg
gataagaagatggtggcaagcagaagaaaagagccttcacaaaatgcagatgattccaga
ttaaatgatgaagccatcgccaagcaattgcaacttgatgaagatgcagagctagagaga
caactgcatgaagatgaagagtttgccagaacattagccatgttggatgaagaacccaag
accaaaaaggctcaaaaggacccaggagagagagagacgttttcatctgtacaagccagt
ttatataaagcagaaaaacctaaatatcatcataaagaacaattttcagataacagaaac
aacagcagtcctaagaagcaaactaaatgtgaaagttcaaaagaatctgagaaacattcc
aggtcatccactcataaaataggagaaacttcttctccaaaaaccagttccaagctgaca
cttttgaaaaaaaaagaagaaagttctaataaagaaacagagcccctggcctcaaaaaga
aaagaaaatgccattgagttaaaagagacaagaactcctaagaaaatcaaaagttctcca
gctaaaaaagagtctataagtcctgaagattctgaaaagagacgcactaattatcaagct
tatcgaagctacttaaatcgagaaggtcccaaagctctgggctccaaagagataccgaag
ggagctgaaaattgcttggaaggccttacatttgtaatcacaggagtgctggagtccatt
gaacgagatgaggccaagtctctaattgagcgttatgggggaaaagtaacaggaaatgtc
agcaagaaaacaaactaccttgtcatgggtcgtgacagtggtcagtccaagagtgataag
gcagcagccttgggaacaaaaattattgatgaggatggcctattgaatctgattcgaact
atgccaggcaagaagtccaagtatgaaatagcagctgaagctgagatgaagaaagaaaaa
tccaaattggaaagaacaccccaaaaaaatgaccaaggaaaacgaaaaattagtccaact
aagaaggaatcagaatctaaaaagtgcaaactgactcccaaaaaggaaagctctataaag
tcaataaaaaaggaaacaagtatgtttcagagaggcctgcacttcaaggagcaggtggct
gaggaaacaaatggtgacagctgggctaggaacttggctgatgacagcagtgaaaacaaa
gcggaaaatttgctctgggtggataaatataagccagcctcgctcaagaccataattgga
cagcaaggtgaccagagctgtgccaacaaactcctgcgctggctccaaaactggcacaag
agcccatccgaagataagaaacacgcggcaaagtttggtaaatttgctggcaaagatgat
ggctccagttttaaagctgcactgctctcaggccctcctggtgttggcaaaacaaccaca
gcttctctggtttgtcaggaattgggatatagctacgtggaactgaatgcaagtgacact
cggagtaagaacagtttgaaggagattgttgctgaatcgctgaataataccagcatcaaa
ggcttttattcaagcggagcagcccgttcagtaggcacgaaacatgctctcatcatggat
gaagtagatggcatggccggcaatgaggacaggggaggaattcaggaattaattggcctg
ataaaacatacaaaaattcccattatttgtatgtgcaatgatagaaatcatcccaagatt
cgatctttggttcattattgttttgatcttcgttttcaaagacctcgggttgaacaaatt
aagggtgctatgatgtctattgcatttaaagagggtttaaagatcccccctccagctatg
aatgaaataattttgggagccaatcaagatatcagacaggttttacacaatctgagtatg
tggtgtgcacgaagtaaagcactaacctatgaccaggctaaggctgattctcatagagcc
aaaaaggatatcaaaatgggcccatttgatgttgcccggaaagtgtttgtaactggagag
gagactgctcatatgtcacttgtggacaaattagatctctttttttatgattattcaata
gcacccctctttgtccaggagaactacatacatgtgaagcctgtagccgcagggggtgac
atgaaaaagcacttgatgcttttaagcagagcagcagacagcatatctgatggtgaccta
gtggaccgtcagatccggaataagcaaaactggagtcttctgcccacacaggccatttat
gccagtgttcttcctggagagttaatgagggggtacatgacccagtttcctaccttccca
agttggttggggaagcactcatctatgggcaaacatgatcgtattgttcaggacctagca
ttgcatatgagtctcagaacttactccagcaaaaggactgtaaacgtggattatctgtca
catataagggatgcacttgtacagcccttgacctcacaagggatagaaggagtacaggat
gttgttgctcttatggacacgtattatttgatgaaagaagactttgagaatatcatggaa
attagcagctggggagacagacctagtcccttctccaagctggatcccaaggtgaaagca
gccttcacaagggcttacaataaggaagtccaccttattccgtattcactccaggcagtg
aagatacacagacacagcacaggcccagcgctggattctgaatacaatgaagagttaaat
gaagatgactctcaatctgatgagaaagaccaggatactttggaaactgatgctatgatc
aagaaaaagacaaaatcttcaaagccttcaaaatcagaaaaagagtccagaaaaggaaaa
ggaaaaagttcaaagaaatga
DBGET
integrated database retrieval system
