Balaenoptera acutorostrata scammoni (minke whale): 103019735
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Entry
103019735 CDS
T03086
Symbol
USHBP1
Name
(RefSeq) USH1 protein network component harmonin binding protein 1
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
bacu03037
]
103019735 (USHBP1)
Cilium and associated proteins [BR:
bacu03037
]
Primary cilia and associated proteins
USH complex and associated proteins
103019735 (USHBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
Motif
Other DBs
NCBI-GeneID:
103019735
NCBI-ProteinID:
XP_007195568
UniProt:
A0A384B8F8
LinkDB
All DBs
Position
Un
AA seq
725 aa
AA seq
DB search
MSARATRPRSRRGRHALPGELDPVAESSEEAEAASGSSEPGPVPSQDSCKPEPLGPETEA
KGQGLESRTDKGVDGDSSRGPAPAPEGPYEPAQEAHQAPEAASWDRENVPSGPRAPDVFQ
TLQQALSSLEAAAAAWRHQPPRCPGPLEAKDRSEGGPKPCLEQEQAGSCQRDAARLTERN
AWLRLALGSREDELIRTQNSLKAFQAEKEMLQREVQELQDSLLRLKPFPPPSCDQVGGSG
SGSSSSGADGETWGTQDPFSLAHPLLRRLQSDSSTQMLGPLLTQLLAPEMHIMEAQMEHL
QGNIEKLKCFNRLLSAVLQEYKGRCEGLSMRLGQREAEATALRLALQYSKMGVLERSELV
SHSEHCEEAYGALLTLRKADSGAGEEAFMDNLEAAEKEAQRLLVQEEAAMDGGILQDPRP
SPEGSSVDRPTPQEVAIQLQGYVQRLQERRALVKIPPEPGPTLAPMSTVPRAEAMVQAIL
GTQPGPALPRLEKMQIQEDLVATRVHMGCGHCETLADLMLRLQLVRREKRALELREAALR
AQGPAHVLLLEQLRWERAKLRTGGANSSGGDSSGGGSSGDEEEWSQGPPAVPGGSRGVDG
GQVSKVQNPEELAQELSASLTRALGLREQLQSLREELEEVAQKGRARRAQSTELNSDLCK
AHSALVMAFRGAHRKQEEQRRKLEQQVALMEARQAEELAVLEATARALGRPRPPCLPPRP
GGTFL
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccagggccacacggccccgaagccggcgagggaggcacgctctgcccggtgag
ctggaccctgtggcagagagttcagaagaggctgaggcagccagtgggagctccgagccg
ggccctgtgccatcccaggatagctgcaagccagagccgctgggccctgagacggaggcc
aaagggcagggcctggagagcaggactgacaaaggagttgatggggactctagcagggga
cctgctccagcccccgaggggccctatgagcctgcccaggaagcccaccaggccccagag
gcagcctcatgggacagggagaatgtcccctctggacccagagcccctgacgtgtttcag
actctccagcaagctctgagctctctggaagcggctgctgctgcctggcgccaccagccc
ccaagatgtcctgggccgttggaggcaaaggacagaagcgaggggggaccaaagccctgc
ttggagcaggagcaggctgggagctgccagcgggatgcagcccgattgactgaaaggaac
gcctggctgcgtttggccctgggcagccgtgaggacgagctgatccgcacacagaactcc
ctgaaggccttccaggctgagaaggagatgctgcagagagaggtccaggagctgcaggat
tccctgctgaggctgaagcccttcccacctccctcctgtgaccaagtaggcggctcaggt
agtggttccagcagctctggggctgacggggagacctggggcactcaggatcccttctcc
ctggctcaccccttgctccggcgcctccagagtgattccagcacccagatgcttgggcct
ctcctcacccagctccttgcccccgagatgcacatcatggaagcccagatggagcatctc
caggggaacattgagaagctcaaatgcttcaaccgtctgctgtcagctgtactccaggag
tacaagggccggtgtgagggcctcagcatgcggctgggccagcgggaggctgaggccact
gcattgcgtctagccttgcagtatagcaagatgggtgtcctggagcgctcagaactggtg
tcccacagtgaacactgtgaggaggcatatggggccttgctcactcttcggaaggcagac
tcaggagcaggagaagaagccttcatggataacttggaggcggctgagaaggaagctcag
aggcttctggtgcaagaggaggctgccatggatggagggatactgcaggatccacgtcca
agccccgagggcagcagtgtggataggcccacaccacaggaggtggctatccagctccag
ggctacgtccagcgtctccaggaacgccgtgctctggtgaagattcccccagagcctggt
cccaccttggcacccatgtccactgtgccccgtgcagaagccatggtgcaggccattctg
gggacccagcctggccctgccctgccccggctggagaagatgcagatccaggaggacctg
gtggccacacgggtacacatgggctgtggccactgtgagaccctagcagacctgatgctt
cggctacagctggtgcggcgggagaagcgggctctggagctgcgggaggctgccctccga
gcccagggcccagcccacgtgctcctgctggagcagctgcgctgggagcgcgcaaagctc
cggactgggggtgccaacagcagtggtggagacagcagtggaggcgggagcagtggagat
gaagaggagtggtcccagggccctccggctgtccctggtggcagcaggggtgttgatgga
ggccaagtgagcaaagtgcagaacccagaagagctagcccaggaactgtcagcatcactc
acccgggctctgggcctgagggagcagctgcagtccttgcgggaagagctggaagaggtg
gctcagaaggggcgagccagacgtgctcagagtactgagctgaacagtgatttatgcaaa
gctcacagtgccctggtcatggccttccgtggtgcccaccggaagcaggaagagcaacgg
cggaagctggagcagcaggtggcactgatggaagcccgacaggcagaggagctggcagtg
ctggaagccaccgcaagggccctggggaggcccagaccgccctgcctgcctccgcggcca
ggggggacctttctataa
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