Balaenoptera acutorostrata scammoni (minke whale): 103020192
Help
Entry
103020192 CDS
T03086
Symbol
TRUB1
Name
(RefSeq) TruB pseudouridine synthase family member 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bacu03016
]
103020192 (TRUB1)
Enzymes [BR:
bacu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
103020192 (TRUB1)
Transfer RNA biogenesis [BR:
bacu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
103020192 (TRUB1)
Prokaryotic type
103020192 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
103020192
NCBI-ProteinID:
XP_007173206
UniProt:
A0A383ZDS3
LinkDB
All DBs
Position
Un
AA seq
348 aa
AA seq
DB search
MAAAEAGLVSSSSLKPDTAPVPESAGMAAATAATSSAMAAAAAVASRSGSEARVSKPALA
TKLLSLSGVFAVHKPKGPTSAELLNRLKEKLLAEAGMPSPEWTKRKKQTLKIGHGGTLDS
AARGVLVVGIGRGTKLLTSMLSGSKRYIATGELGKATDTLDSTGKVTEEKPYDKITQEDI
EGILQKFTGNIMQVPPLYSALKKDGQRLSTLMKRGEVVEAKPARPVTVYSLSLQKFQPPF
FTLDVECGGGFYIRSLVSDIGKELSSCANVLELTRTKQGPFTLEEHALPEDRWTIDDIAQ
SLEQCSSLLPAEMALKKSKPEESSEQVLSCEYITLSEIKGEDDVIKTF
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgctgaggcggggttggtatcgtcgtcatccttgaaaccagacacagcccca
gtccccgaaagtgcaggaatggctgcagccacggccgccacatcctcagcgatggctgca
gccgcggcggttgcgtccaggagcggatccgaagccagggtctccaagcccgcgttggct
actaagctgctgtccctgagcggcgtgttcgccgtgcacaagcccaaagggcccacttca
gccgagctgctgaatcggctgaaggagaagctgctggcagaagctggaatgccttctcca
gaatggaccaagaggaaaaagcagactttgaaaattgggcatggagggactctagacagt
gcagcccgaggagtcctggtggttggaattggaaggggaacaaaactgttgaccagtatg
ttgtcagggtccaagaggtatattgccactggcgaactggggaaagctactgacacgcta
gattctacagggaaagtaacagaagaaaaaccttacgataaaataacacaggaagatatt
gaaggcattctacagaaatttactgggaatataatgcaagtacctcccctctattctgca
ttaaagaaagatggacagagactttcaactttgatgaagagaggtgaagtagtagaagca
aaacctgccaggccagttaccgtgtacagtctttcccttcaaaaattccagccaccattt
ttcacattagatgttgaatgtggaggaggtttttatatcagaagcttggtcagtgacatt
ggcaaagaactgtcttcctgtgccaatgttctggagctgacccgaaccaaacagggaccc
tttaccctggaggagcatgcccttcccgaagacagatggacaattgatgacattgcacag
tctctcgagcagtgctcatcccttctcccagcagagatggcacttaaaaagtcaaaacct
gaggagtctagtgagcaagttttgagctgtgagtacataactctaagtgagataaaggga
gaagatgatgtaattaagacattttaa
DBGET
integrated database retrieval system
