KEGG T03086: 103020416

Balaenoptera acutorostrata scammoni (minke whale): 103020416

Entry

103020416         CDS       T03086

Symbol

POLR2D

Name

(RefSeq) RNA polymerase II subunit D

K03012

DNA-directed RNA polymerase II subunit RPB4

Organism

bacu Balaenoptera acutorostrata scammoni (minke whale)

Pathway

bacu03020

RNA polymerase

bacu03420

Nucleotide excision repair

bacu05016

Huntington disease

Brite

KEGG Orthology (KO) [BR:bacu00001]
09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    103020416 (POLR2D)
  09124 Replication and repair
   03420 Nucleotide excision repair
    103020416 (POLR2D)
09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    103020416 (POLR2D)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bacu03021]
    103020416 (POLR2D)
   03400 DNA repair and recombination proteins [BR:bacu03400]
    103020416 (POLR2D)
Transcription machinery [BR:bacu03021]
Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     103020416 (POLR2D)
DNA repair and recombination proteins [BR:bacu03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      103020416 (POLR2D)

SSDB

Motif

Pfam:

RNA_pol_Rpb4 Maelstrom Tfb4

Other DBs

NCBI-GeneID:

103020416

NCBI-ProteinID:

XP_007182927

UniProt:

A0A384A6J3

LinkDB

Position

AA seq 119 aa
IEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEVFMKTLNYTARFSRFKNRETIASV
RSLLLQKKLHKFELACLANLCPETAEESKALIPSLEGRFEDEELQQILDDIQTKRSFQY

NT seq 360 nt +upstreamnt +downstreamnt
atagagtttgaaacagctgagacacttctaaattcagaagttcatatgcttctggagcat
cgaaagcaacaaaatgagagtgcagaggatgaacaggaactttctgaggtcttcatgaaa
actttaaactacacagcccgtttcagtcgtttcaaaaacagagagaccattgccagtgta
cgtagcttgctgctccagaagaagcttcataagtttgagttggcctgtttagccaacctt
tgtccagagactgctgaggagtccaaggctctgatcccaagcctggaggggcggtttgaa
gacgaggagctgcagcagattctcgatgacatccagaccaagcgcagctttcagtactga

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