Balaenoptera acutorostrata scammoni (minke whale): 103020495
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Entry
103020495 CDS
T03086
Symbol
FREM1
Name
(RefSeq) FRAS1 related extracellular matrix 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103020495 (FREM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
bacu04091
]
103020495 (FREM1)
Lectins [BR:
bacu04091
]
C-Type lectins
Lecticans
103020495 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Lectin_C
Big_9
Calx-beta
Cadherin_5
Motif
Other DBs
NCBI-GeneID:
103020495
NCBI-ProteinID:
XP_007176833
UniProt:
A0A383ZNZ3
LinkDB
All DBs
Position
Un
AA seq
2176 aa
AA seq
DB search
MSCLSWGGLSALLLLLLRLLPGWASPSLIRVNRGVRVMKGSSAFLSQDDLKFAIPKEKDA
CKVEVVMNEPITQRVGKLTPQVFDCHFLPNEVKYTHNGCPILDEDTVKLRLYRLTETDTF
TETFILRVYLLEPDCNIIRMSDNVLEVSEFYGLSRAIDKNLLRFDYERTASLECTVRLDP
VGTRLPAHGQLVLVEPRPEEPRGDQPHSFFPESQLGTELKCPGGRCPLGLKKIGRLKVSC
EEFLLSGLRYQHLSPPSPHIDYISIQLDLTDSRSKIIYKSESVWLPVYIRAGIPNQIPRA
AFMAMFILEVDQFILTSLTTSVLDCEEDETPKPLLVFNITKAPLQGYVTHLWDHTRPVSS
FTWKDLSDMQIAYQPPNSSHSERRHYEVELEVYDFFFERSAPITVHISIRTADTNAPRVS
WNTGLNLLEGQSRAITWEQFQIVDNNDIHAVQVVIVGGLQHGRLTLRGGKGFLFTVADLQ
AGVVQYHHDDSDSTKDFVVFRIFDGQHSIRHKFPINILPKDDSPPFLITNVVIELEEGQT
ILIQGSKLRASDMDSSDDYIFFNITKPPQAGEIMKKPAPGLIGYPVPGFLQMDLFNGIIY
YRHFGGEIFEDSFEFVLWDSHEPPNLSEPQVVTIHITPVDDQLPKEAPGVSRHLVVKETE
VAYITKKHLHFVDTESYDRELLYTVTTPPFFSSSRRHLDAGKLFMVDSIPRLTKNPAAPE
LKSFTQHAVNYMKVAYMPPMQDIGPHPRHVQFAFSVSNQHGGTLFGICFNITILPVDNQA
PEVFTNPLRVAEGSQCVISTEHVLVSDVDTKLDNIHLSLQRQPQHGRVELNGFPLNTGAI
FSWGDLQALKVRYQHDGSEILQDDILLEVTDGINAAECVLYIEVFPVNDEPPVLKADLIP
MMHCSEGEEVVITSEYIFATDMDSDDMKLMFMIVQEPQHGTVRKAGVTVHQFSQGDVTAG
AVTYKHTGGEIGLVPCFDTITLVVLDTEAGPFVNGPHPSVPLRESFPVYDLNITVYPVDN
QSPSIAIGTVFFVDEGFSAALTINHLSATDPDTAADDLEFVLVSPPQFGYLENTLPSAGF
EKSNMGISIASFQWKDMKALHINYVQSRHLRMEPTADRFMVYVTDGKRRSLEIPFYIIIN
PTNDEAPDFIVRNITVCEGQMRELDSSIINAVDQDIPKDPLLFSVTHKPRHGLLINGVFS
KDFPQYKQSPNLGQKHELVYNFSMELLKNGMRLMYLHDDSESLADDFTIQLSDGKHKILK
TISVEVTPVNDEKPVLSKKAEITVNMGETRIISSAVLSAIDEDSPREKIYYLFERLPQNG
QLQLKIGRDWVPLHPGMKCTQEEVDLNLLRYTHTGAMDSQNRDSFTFYLWDGDNRSPAFD
CHITIKDMGKGDIVIRAKPLLVSKGDRGFLMTTTLLAVDGTDKPEELLYVITSPPRYGQV
EYVHYPGVPITSFSQMDIAGQTVCYVHKSTAAAHRDTFRFIVSNGLQTKPGVFEITLETV
DTALPVVTRNKGLRLAEGATGFLSPDLLQLTDPDTPAENLTFLLAQLPRHGQLYLRGTVP
LSHSFTQLDVDSGHVTYRHSGGHSRTDRFTFVATDGTNQGFLVDGRRWQEPVSFTIQVNQ
VDKAAPLITHLHSPSQVGLLKNGCYGIYITSQVLKASDPDTDDNQIIFKILRGPQHGHLE
NTTTGEFIHEKFSQKDLNSKTVLYIINPSLEVNSDTMEFQVMDPTGNSATPQILELKWSR
IEWSQTEYEVCENVGILPLEITRKGYSMDSAFVSVKVNQVSATVGKDFTMTPSKLIQFDP
GMSTKMWNIAITYDGLEEVDEVFEVILNSPVNAVLGTKTKTAVKILDSKGGQCHPTYAFD
ANMPNAWEKGIWSLPSPGASSRTTPGSFHPERRPLPSSKQLAVARGDTLRDFDSEDLSRM
KLRTQGNGKRVHPSSVYRNGTDIIYNYHGMISLKLEEDSSSTHKRKAKVSIVSQPQKTIK
VAELPQADKEESTTGSHFPQQDRLPSFPKNCTLELKGLFHFEESLQKLYKCNGIAWKSWS
PHTKVEDKSCPAGWHHHLGYCHSLITEQKGTWIIAAQACREHHLGSLVTVLSRQHMQWLW
DISGRKPFWIGLNDQVRAGHWEWIGGEPVTFTNWRRGPPQRSKPGKNCVLVQRQGKWQTK
DCKKGKSHNYMCSRKL
NT seq
6531 nt
NT seq
+upstream
nt +downstream
nt
atgagctgtctaagctggggtgggctcagtgccctgctgctgctgctgctgaggctgctc
ccaggctgggccagcccttccctcatccgtgttaaccgaggggtcagggtgatgaagggc
agctccgccttcctgtctcaggatgacctgaagttcgccatccccaaagagaaagatgcc
tgcaaagtggaagttgtgatgaatgagccaataacccagagggttgggaaactcactcca
caggtctttgactgtcatttccttcccaatgaagtaaagtatactcacaacggttgccca
attcttgatgaagacacagtgaagcttagactttacagattgacggagacagacaccttc
acggaaacctttatcctgcgggtctatctcctggaaccagactgtaacatcatccgtatg
agtgacaatgtactggaggtgtctgaattctatggcttgtcccgggccattgataaaaac
ctgctcagatttgattatgagaggacggctagtctggagtgtacagtcaggctggaccct
gtgggaactcggctgccagcccatggccagctggttctagtggagccccggccggaagaa
cctcgtggagatcagccacacagttttttccctgagtctcaactgggaacagaactgaag
tgtccaggtggcagatgtcccctgggactgaagaagataggacgtctcaaagtgagctgt
gaggagttcttgctgtcggggcttcgatatcaacatctgagtcctccttctccgcacatt
gattacatctccatccaactggacctcacagatagcaggagtaaaatcatatacaagtca
gagagtgtgtggttacctgtctatatcagagctggcatccctaatcagattccaagggct
gcattcatggccatgtttattctggaagtggatcagttcatcctgacctctttgactacg
tcagttctggactgtgaagaggatgagacccccaaacccttgctggtgttcaacattact
aaagccccactccaaggctatgtgactcacctgtgggatcacaccagaccggtgtcctcc
ttcacctggaaagatctaagtgacatgcaaattgcctatcagccaccaaacagcagccat
tctgagaggagacattatgaggtggagttggaagtatatgacttcttctttgaaaggagt
gcacctattacagtccacatctccatcagaacagcagacacaaatgccccgagagtgtcc
tggaacacaggtctgaatctcctagagggacagtctcgggccatcacctgggaacagttt
cagattgttgacaataatgacattcatgctgtccaggtagtcatcgtgggtggcctgcag
catggacggcttactctgagaggggggaaggggtttctcttcaccgtggctgaccttcag
gctggagtcgttcaatatcatcatgacgacagtgactccaccaaagactttgtggtcttc
aggatattcgacggccaacacagcatccgacataagtttcccatcaacatcttgcccaaa
gatgatagtccaccattcctcataaccaacgttgtgattgagctggaggaggggcagacc
atactgatccagggttccaagctgagagcttcagacatggactccagtgatgactacatc
ttctttaatatcacgaaacccccgcaggctggagagatcatgaagaagccagcaccagga
ctgataggctatcctgtccctggcttccttcagatggatctgttcaatggcatcatttac
tatcgtcattttggtggagaaatctttgaagactcatttgaatttgtcctgtgggacagc
cacgaacctccaaatctctcagagccacaggtggtgacaatccatatcactccagtagat
gaccagcttccgaaagaggctcctggagtttctcggcatttggttgtcaaggaaacggag
gtggcctatatcactaagaaacatctacattttgtagatacagaatcctatgacagggag
ctgctctacacagtaaccactcctccatttttctcctctagccgcagacacttggatgct
gggaaattattcatggtagacagcataccaaggctaaccaaaaaccctgcagctccagag
ttgaagtcattcactcagcatgctgtgaactatatgaaagtggcctacatgccacccatg
caagatataggcccccatccccgacacgtccagtttgccttttccgtcagtaaccagcac
ggtggcactttgttcgggatctgctttaacatcacgattcttccggtggacaatcaggcc
cctgaggtatttaccaaccctctgagagtggctgagggaagtcagtgtgtcatcagcaca
gagcacgtcctggtttctgacgtggacaccaaactggacaacatccacctctccctgcag
agacagcctcagcacggaagggtggagctgaatggatttcctctaaacacaggggccata
ttttcttggggagacctccaggccttaaaagttaggtatcagcatgatgggtctgagata
cttcaggatgacatactactggaggtcacagatggcataaatgcagcagaatgtgtgcta
tacattgaggtgttccctgtaaatgatgagccaccggtcctaaaggcagacctcattccc
atgatgcattgctcagagggcgaagaggtggtcattacctctgaatacatttttgctacg
gatatggacagtgatgatatgaaactgatgttcatgattgttcaagaacctcagcatggg
acagtgaggaaagctggggtcacagtgcatcagttttctcagggagatgttacggcaggg
gctgtgacgtacaaacacacaggtggtgagattggcctggtgccttgttttgacaccatt
acgttggtagttttggacacagaagctggcccttttgtgaatggacctcatccatctgtt
cctcttcgtgagtcctttccagtgtatgatctcaacatcacagtgtatccggtggacaac
caatcaccttcaattgcaataggtaccgtgttctttgtagatgagggtttctcagcagcc
cttactattaaccatttgtctgccactgaccccgacactgcagcagatgacttggaattt
gttttggtttctcctccccagttcggctaccttgaaaacacactaccttctgcaggtttt
gaaaaaagcaatatgggcatcagcatagcttcgtttcagtggaaagacatgaaggcttta
cacattaactatgtgcagtccaggcatctgaggatggaaccaacagccgaccggttcatg
gtgtatgtcactgacgggaaacgacgctccttggagataccattttacattataatcaac
cccacaaatgatgaagctcctgattttatagtgcggaatattactgtgtgtgagggtcag
atgagagagctggattcttccatcattaatgctgttgaccaggacattcccaaggacccc
ttgctgttcagcgtcactcacaaaccacgtcatggcctcctcatcaacggggtgtttagc
aaagactttcctcagtataagcaatcacccaaccttggccagaagcatgaacttgtttac
aacttttccatggaacttctcaagaatggaatgaggttgatgtatttgcatgatgactca
gagagccttgctgatgactttacaatccagttgtcggatgggaaacataagatacttaaa
accatctctgtagaggtcaccccagttaatgatgagaaaccagtgctgagcaagaaagct
gaaattacagtgaatatgggtgaaactcgtattatttctagtgcagttctctcagccata
gatgaagactcacccagggagaagatttactacttatttgaaagacttccccaaaatggg
caacttcagcttaagatagggagggactgggtccctctccaccctggcatgaaatgcact
caggaagaagtggatctgaacttgctgagatacacacacaccggcgcaatggattcccag
aaccgagacagcttcaccttctacctctgggatggtgacaataggtcccctgcatttgac
tgtcacatcaccataaaggatatgggaaaaggtgatattgtcatccgggcaaaaccactt
ttggtgtctaaaggtgacagaggtttcctgatgaccaccaccctccttgctgtggacgga
acagacaagcctgaggaacttctctacgtcatcacctccccaccacgatacggccaggtc
gaatacgtccactatcctggggtccccattacaagcttcagccaaatggacatagcagga
cagacagtctgctacgtacataaaagcacggcagctgcccacagagacacgttcagattc
atcgtgagcaatggactgcagaccaagcccggggtgtttgagatcacactggagactgtg
gacacagccttacccgtggtgaccaggaacaaggggctgagactggctgaaggggccacg
ggcttcctctcccctgacctccttcagctgaccgaccctgacactccagcggagaacctc
accttccttttggcccagcttccacgacacggccagctctacctgcgggggacagtgccg
ctttcacacagtttcactcagctggacgtggacagcgggcatgtgacctacaggcactcg
ggagggcactctcgcacagaccgctttacttttgtggccacagatgggacaaaccaaggc
tttcttgtggatgggagaaggtggcaagaacctgtttcattcaccatccaggtgaaccag
gtggacaaagcagcccccctcatcacacatttgcattccccttctcaagtggggctcctg
aaaaacggttgttatgggatttacatcacttcccaggtgttgaaggcatcggaccctgac
actgatgacaatcagatcatctttaagattttacgaggcccccaacatggacatctggag
aatacaacaacaggtgaatttatccatgagaaatttagccaaaaggacttaaacagtaag
accgttctttacatcataaacccatctttggaagtaaattcagataccatggaatttcaa
gtcatggaccccacagggaactctgccactcctcaaatcttggaactgaagtggtctcgt
atcgagtggtcacagactgaatatgaggtctgtgagaatgtgggcatattgcccttggaa
attaccagaaagggatattccatggactcggcctttgtgagtgtaaaggtcaaccaagtg
tcagctacagttggaaaggatttcactatgactccatctaagctgattcagtttgaccca
ggaatgtcaactaagatgtggaatatagcaattacctatgacggattagaggaagttgat
gaggtctttgaagtaattctgaactcccccgtgaatgcggttcttggcacaaagacaaaa
actgcagtgaaaattttggactcaaaaggaggacagtgccatcctacatatgccttcgat
gcaaacatgcccaacgcatgggagaagggcatttggagcctgccctccccaggggcttcc
tcacgcaccactcctggttcctttcatccggaaagaagaccccttccatcttccaagcag
ctagcagttgccaggggagacaccctgcgggactttgattctgaagatctttctcgaatg
aagcttaggacccaagggaatggcaaaagagtccatccatcctctgtttatagaaatgga
acagacatcatctacaattatcatggaatgatttcgctgaagctggaggaggacagttcc
tcaactcacaaaaggaaggccaaagtatccattgttagtcagccgcaaaagacaatcaaa
gtggcagaactgcctcaagcagataaggaggaatccacaaccggctcacacttcccccaa
caggaccggttgccctcgtttccaaagaactgcacactggaattaaagggactcttccac
tttgaagaaagcctccaaaagctgtataagtgcaatggaattgcctggaaatcttggagc
cctcacaccaaggtggaagataaatcatgcccagctgggtggcaccatcacttaggctac
tgccactccttgatcacagagcagaagggcacctggatcatagccgcccaagcttgcagg
gaacatcacctgggcagccttgtaactgtcctctccaggcagcatatgcaatggctttgg
gacatcagtggaagaaagcccttttggataggtttgaatgaccaagtgcgtgctggccac
tgggagtggatcggcggtgaacctgtgaccttcaccaactggaggagagggcctcctcaa
cgttcaaagcctggcaagaactgtgttttggttcaaagacaaggaaaatggcaaacaaag
gactgtaagaagggcaaatctcacaattatatgtgctccaggaaactctaa
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integrated database retrieval system
