Balaenoptera acutorostrata scammoni (minke whale): 103021070
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Entry
103021070 CDS
T03086
Symbol
VLDLR
Name
(RefSeq) very low density lipoprotein receptor
KO
K20053
very low-density lipoprotein receptor
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu05017
Spinocerebellar ataxia
bacu05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
103021070 (VLDLR)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
103021070 (VLDLR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bacu04131
]
103021070 (VLDLR)
Membrane trafficking [BR:
bacu04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
103021070 (VLDLR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
cEGF
EGF_CA
EGF_LRP2
EGF
SGL
hEGF
EGF_3
Motif
Other DBs
NCBI-GeneID:
103021070
NCBI-ProteinID:
XP_007182283
LinkDB
All DBs
Position
Un
AA seq
695 aa
AA seq
DB search
MRTCRINEISCGARSTQCIPVSWRCDGENDCDSGEDEENCGNITCSPDEFTCSSGRCISR
NFVCNGQDDCSDGSDELDCTPPTCGAHEFQCSTSSCIPISWVCDDDADCSDQSDESLEQC
GRQPVIHTKCPASEIQCGSGECIHKKWRCDGDPDCKDGSDEVNCPSRTCQPDQFECEDGS
CIHGSRQCNGIRDCVDGSDEVNCKNDVNECLVNNGGCSHICKDLVIGYECDCAAGFELID
RKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPSLIFTNRRD
IRKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHVKMID
NVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNSDLREPASIAVDPLSGFV
YWSDWGEPAKIEKAGMNGFDRRALVTADIQWPNGITLDLIKGRLYWLDSKLHMLSSVDLN
GQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAVYGANKFTGSELATLVNNLNDAQD
IIIYHALVQPSGKNWCEEDMENGGCEYLCLPAPQINDHSPKYTCSCPNGYNLEDNGRECQ
KINVTTAVSEVSVPPKGTSAAWAILPLLLLAMAAVGGYLMWRNWQHKNMKSMNFDNPVYL
KTTEEDLSIDIGRHSASVGHTYPAISVVSTDDDLA
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgagaacatgccgcataaatgaaatcagctgtggtgcccgttccactcagtgtatccca
gtgtcctggagatgtgatggtgaaaatgattgtgacagtggagaagatgaagaaaactgt
ggcaacataacatgcagccctgatgagttcacttgctccagcggccgctgcatctccagg
aatttcgtgtgcaatggccaggatgactgtagcgacggcagcgacgagcttgactgcacc
ccacccacctgcggggcccacgagttccagtgcagcacctcctcctgcatccccatcagc
tgggtgtgcgatgacgacgcagactgctcggaccagtcagatgagtccctcgagcagtgt
ggccgccagccagtgatccacaccaagtgcccagccagcgagatccagtgcggctccggc
gagtgcatccacaagaagtggcgatgtgacggggatcctgattgcaaggatggcagcgat
gaggtcaactgtccttcccgaacctgccaacctgaccagtttgagtgcgaggatggtagc
tgcatccacggcagcaggcagtgtaacggcatccgagactgtgtcgacggttctgatgaa
gtcaactgcaaaaatgatgtaaatgaatgcttggttaataatggcggatgctcccatatc
tgcaaagacctagttataggctacgaatgtgactgtgcagctgggtttgaactgatagat
aggaaaacctgtggagatattgacgaatgccaaaatccgggaatctgcagtcaaatttgt
atcaacttaaaaggcggttacaagtgtgaatgtagtcgtggctatcaaatggatcttgcc
actggcgtgtgcaaggcagtaggcaaagagccaagtctgatcttcactaatagacgagac
atcaggaagattggcttggagagaaaagaatatatccaactagttgaacagctaagaaac
actgtggctctcgatgctgacattgctgctcagaaactattctgggctgatctaagccaa
aaggccatcttcagtgcctcaattgatgacaaggttggtagacatgttaaaatgatcgac
aatgtctataatcctgcagccattgctgttgattgggtgtacaagaccatctactggact
gatgcggcttctaagactatttcagtagctaccctagatggaaccaagaggaagttcctg
tttaactctgacttgcgagagcctgcctccatagctgtggacccgttgtctggctttgtt
tactggtcagattggggtgaaccagctaaaatcgaaaaagcaggaatgaatggatttgat
agacgggcgctggtgacagcagacattcagtggcctaacggaattacactcgacctcata
aagggccgtctctattggctggattccaaattgcacatgttatccagtgtggacttgaac
ggccaagatcgcaggatagtcctaaagtctctggaattcctagctcatcccctcgcactc
acaatatttgaggatcgtgtctactggatagatggggaaaatgaagccgtctacggcgcc
aataaattcactggatcggagctggccactctagttaacaaccttaacgatgcccaagac
atcatcatctatcatgcacttgtacagccatcaggtaaaaattggtgcgaagaagacatg
gagaatggaggatgtgaatacctctgcctgccagccccacagattaatgaccactctcca
aaatatacctgttcctgtcccaatggatacaatctagaggacaatggccgagagtgccaa
aagatcaacgtgaccacagcagtatcggaggtcagtgttcccccaaaagggacttctgct
gcctgggccatccttcccctcttgctcttagcaatggcagcagtaggtggctacttgatg
tggcggaattggcaacacaagaacatgaaaagcatgaactttgacaatcctgtgtacttg
aagaccactgaagaggacctgtcaatagacatcggtagacacagtgcttctgtcggacac
acgtacccagcaatatccgttgtaagcacagacgatgatctagcttga
DBGET
integrated database retrieval system
