Bacillus sp. V3: I7V34_00560
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Entry
I7V34_00560 CDS
T11035
Name
(GenBank) 3'-5' exoribonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bacv Bacillus sp. V3
Pathway
bacv03030
DNA replication
bacv03430
Mismatch repair
bacv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bacv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I7V34_00560
03430 Mismatch repair
I7V34_00560
03440 Homologous recombination
I7V34_00560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bacv03032
]
I7V34_00560
03400 DNA repair and recombination proteins [BR:
bacv03400
]
I7V34_00560
Enzymes [BR:
bacv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I7V34_00560
DNA replication proteins [BR:
bacv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I7V34_00560
DNA repair and recombination proteins [BR:
bacv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I7V34_00560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
BRCT
DEDDh_C
UCH
Motif
Other DBs
NCBI-ProteinID:
QTC41811
LinkDB
All DBs
Position
118730..119644
Genome browser
AA seq
304 aa
AA seq
DB search
MRDFIAFDFETANRSRHSICSVGMVFVENGKIVDSLYELIDPEEDFDGFNINIHGITPQD
VEGAQTFDAFYHSIKEKIENKLMVAHNLSFDGYALRDNLARYGVKPVYNQFLCTYQMSRK
MVTGLPAYKLSSVCTHFGIELENHHHAADDAEACAHIMLKLAEEYGVTDFDSLYNKTRIT
PGEISEGTYRSSLVKKFPKKLDMREFQASKEADPDHVFYGKNIVFTGELKYFSRSEAAKM
AAGCGGQPQNSVTAKTHYIILGNYEDVMIKGKKSSKIMKAEKLINDGKKVEIISEEDFLK
KVHG
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagggactttattgcttttgactttgagacagctaatcgttcgaggcacagtatctgt
tcagtcggcatggtgtttgtggaaaatgggaaaatagtggattcgctttatgaattaatt
gatccagaagaggattttgatgggttcaatatcaatatccatggaatcaccccccaggat
gtggaaggtgcgcagacgtttgatgctttctaccactcaattaaagaaaaaatagaaaat
aagttgatggttgcacataatttatcctttgatggctatgccctgcgtgataatctcgcc
cgctatggtgtaaagccagtatacaatcaatttctatgcacttatcagatgtcgaggaaa
atggtcactggtcttcctgcatacaagctatcttcagtgtgtacccactttggaatagaa
ttagagaatcatcaccatgctgcagatgatgccgaagcatgtgcgcatatcatgctgaag
ctggcagaagagtatggggttacagactttgattctctttacaataagaccaggatcaca
cccggagaaatatccgaaggcacctatcgttcttccctggtaaagaaatttccaaaaaaa
ctcgatatgagagagtttcaagcctcaaaagaagcagacccggaccatgttttttacgga
aagaacatcgtatttaccggtgaactgaaatatttttcaagatcagaagcagcaaagatg
gctgccgggtgtggaggacagccgcagaacagtgtgacagcgaaaactcattatatcatt
cttggaaactatgaagatgtcatgataaaaggtaaaaagtcttcaaaaataatgaaagcc
gaaaagctgatcaacgatgggaagaaagtagaaatcatcagtgaagaggattttctgaaa
aaggtacacggctaa
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