Bacillus sp. V3: I7V34_03820
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Entry
I7V34_03820 CDS
T11035
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bacv Bacillus sp. V3
Brite
KEGG Orthology (KO) [BR:
bacv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bacv03032
]
I7V34_03820 (topA)
03400 DNA repair and recombination proteins [BR:
bacv03400
]
I7V34_03820 (topA)
Enzymes [BR:
bacv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
I7V34_03820 (topA)
DNA replication proteins [BR:
bacv03032
]
Prokaryotic type
DNA Topoisomerases
I7V34_03820 (topA)
DNA repair and recombination proteins [BR:
bacv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
I7V34_03820 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-ProteinID:
QTC42396
LinkDB
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Position
775543..777618
Genome browser
AA seq
691 aa
AA seq
DB search
MADYLVIVESPAKAKTIERYLGKKYKVRASMGHVRDLPKSQMGVDVEKEFEPKYITIRGK
GPVLKELKTAAKKAKKIFLAADPDREGEAIAWHLAHSLDMDTDSQCRVVFNEITKDAIKE
SFKHPRPINMDLVDAQQARRILDRLVGYNISPLLWKKVKKGLSAGRVQSVAVRLIIDREN
EIKNFEPEEYWSIEAEFKKDKETFQASFYGIDGKKVDLKTEEEVKSVLAQVKGKSFEVNK
VTKKERKRNPAPPFTTSSLQQEAARKLNFRAKKTMMLAQQLYEGIALGKEGTAGLITYMR
TDSTRTSEVAQKEANEFITSKYGADFVRQSERKEKKQQKAQDAHEAIRPTSTLRDPGSVK
EFLSRDQYRLYKLIWERFVASQMAPAIMDTMSVDLVNGPVYFRANGSKVKFPGFMKVYVE
GSDDQKEEKDNLLPELKENDKVKSELIDPKQHFTQPPPRYTEARLVKTLEELGIGRPSTY
APTLDTIQRRGYVSLDNKRFVPTELGEIVLELVREFFPEIIDVEFTANMERSLDDIEDGK
VKWERIIDEFYRDFEKHLVIAENEMEKIEIRDEPAGEDCEQCGHPMVFKMGRYGKFMACS
NFPDCRNTKPIVKEIGVKCPKCEKGNIIERKSKKKRIFYGCDQYPECDFLSWDKPIERKC
PKCSELLVEKKLKKGNQIQCTNCDYKEEPQK
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcagattatttagtaatagtggaatcgccggcaaaggcgaaaacgattgaacgttat
ttaggaaaaaaatataaagtacgtgcctccatgggacacgtaagagatttacccaagagt
caaatgggtgtagatgtcgaaaaagaattcgaacctaagtatataacgatacgcgggaaa
ggccctgtgttgaaagaactgaaaacagccgctaaaaaagcaaaaaagatttttctggcg
gccgaccccgatagagaaggggaagcgattgcctggcatctcgcccacagtctggatatg
gacacggactcacagtgccgggtagttttcaatgaaatcacaaaagatgcgataaaagag
tcatttaagcatccccgcccgatcaatatggatcttgtcgatgctcagcaggctcgaaga
atactagacaggctggtcggatataacatcagtcccttgctttggaagaaggtaaagaag
ggactgagtgccggcagggttcaatctgttgcagtgaggctgatcatagaccgcgaaaac
gaaatcaaaaatttcgagccggaagaatattggtccatcgaagcagaatttaaaaaagac
aaagaaacattccaggcatccttctatgggattgatggaaaaaaagtggacttgaagacg
gaagaagaagtgaagtcagtacttgcacaagtaaaagggaaatcctttgaagtgaacaag
gtgacgaaaaaagaaagaaagcgtaatccagcgcctccttttacaacttcctcactccag
caggaagcggcaaggaaattgaacttccgtgccaagaaaacgatgatgcttgcgcagcag
ttatatgaaggtattgcgctgggcaaagaaggtacagccggtttgatcacttatatgcga
accgattctacgcgaacttcagaagtggctcaaaaagaagcaaacgaattcatcacctcg
aaatatggtgcagattttgtaagacaatcggaaagaaaagaaaagaaacagcaaaaagcg
caggacgcacatgaagcaatccgtcctacaagcacattgagggaccccggttcggtaaaa
gagttcctttcaagagaccaataccgcttgtataaactgatatgggaacgttttgttgcc
agccagatggcacccgccatcatggacaccatgagtgtagacctggtgaatggaccagtc
tatttcagggcaaacggctcaaaagtgaaattcccgggattcatgaaggtatatgtagaa
ggctctgacgaccaaaaggaagaaaaagataatctactgccagagctgaaagaaaacgat
aaagtgaagagtgaattaatcgatcctaaacagcacttcactcaaccacctccaaggtat
acggaggcaaggcttgtcaagacgcttgaagaactgggaataggccgcccgtccacttac
gcgcctacacttgatacaatccaaagaaggggatatgtctcccttgataataaaaggttt
gttccaaccgaacttggagaaattgttttagaacttgtaagagagttcttcccggaaatc
attgatgtggaattcactgccaacatggaaagaagcttggatgatattgaagatggaaaa
gtgaaatgggaaagaatcattgatgaattctatagggatttcgagaaacacttggtcatt
gctgaaaatgaaatggaaaaaatcgagatccgtgatgagcctgcaggcgaagactgcgag
cagtgcggacatcccatggtcttcaagatgggccggtatggaaagttcatggcatgcagc
aatttcccagactgtcggaacacaaagccgatcgtgaaagaaataggcgttaaatgccct
aagtgtgagaaaggaaatataatagaaagaaaaagcaaaaagaaacggattttttacgga
tgtgatcaatatccggaatgtgatttcctttcatgggataaaccaatcgaaagaaaatgt
ccgaaatgctctgaactgcttgttgagaagaagcttaaaaaaggtaatcagatacagtgt
acaaactgcgattacaaggaagaaccgcaaaaataa
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