Bacillus sp. V3: I7V34_04245
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Entry
I7V34_04245 CDS
T11035
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
bacv Bacillus sp. V3
Pathway
bacv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bacv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I7V34_04245 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bacv03019
]
I7V34_04245 (rny)
Messenger RNA biogenesis [BR:
bacv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
I7V34_04245 (rny)
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
OmpH
KH_2
DUF2844
Exonuc_VII_L
FUT8_N_cat
Motif
Other DBs
NCBI-ProteinID:
QTC42476
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Position
864587..866146
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AA seq
519 aa
AA seq
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MQPITIISILLGLIVGVVVGYLIRKSIAEAKIAGARGSAEQILEDAKREADALKKEALLE
AKDENHRLRTEMENELRERRNELQKQENRLMQKEENLDRKDDTLDKREALLERKEAALNE
RQQHIEETESKVDEMVRSQQTELERISSLTRDEAKGIILDRVENELSHDIAIMVREHETR
AKEDADKKAKEVLSLAIQRCAAEHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVILSGFDPIRRETARIALEKLVQDGRIHPARIEEMVDKSRREVDEYIRE
IGEQTTFEVGVHGLHPDLIKILGRLKYRTSYGQNVLKHSMEVAYLSGLLAAELGEDERLA
KRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDTEPTSIIAVLVA
AADALSAARPGARSETLENYIRRLEKLEEISESYDGVEKSFAIQAGREVRIMVRPEAIDD
LESHRLARDIRKRIEDELDYPGHIKVTVIRETRAVEYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctattacaatcatctccattttgcttggcctaatcgtcggtgtagttgttgga
tacctaattcgtaagtccattgctgaagcaaagattgccggtgccagaggttcagcagag
cagattttagaagatgctaagcgcgaggcagatgctctgaagaaagaagcactattggaa
gcaaaggacgaaaatcatagacttcgcactgaaatggaaaatgaacttcgtgaacgaaga
aatgaattgcaaaaacaagaaaatcgtttgatgcaaaaagaggaaaacctcgaccgtaaa
gatgatacgcttgataagcgcgaagctttactggaaagaaaagaggcagctcttaacgaa
agacaacaacatattgaagagacggaaagcaaagtggacgagatggtacgatcacagcag
actgaacttgaacgaatctcgagcctgactcgtgatgaagcgaaaggaatcattctcgac
cgcgtggaaaatgagctctcccatgacattgcgatcatggtccgggaacatgaaacacgt
gcgaaggaagatgctgacaagaaagcgaaagaagtcctttcacttgctattcaacgttgt
gctgctgaacacgtggcagaaacaacagttagcgttgtgaacctgccaaatgatgagatg
aaaggtcgaattattgggcgagaaggacgtaacattcgtacgctggaaacattgacagga
attgacctcataattgatgatactcctgaagcggttattctttctggtttcgatccgatc
cgaagggaaacggctcgaattgcattagagaaattagtacaggatggacgtatccaccct
gcacgaattgaagaaatggtggataaatcccgccgtgaagtggatgaatatatccgtgaa
atcggtgaacagacaacatttgaagttggggttcacggccttcacccggatttgatcaag
attctcggacgtttgaagtaccgtacaagttacggtcagaacgttttgaagcactcaatg
gaagtggcctacctttccggattgcttgcagccgagcttggagaagacgaaagacttgcc
aagcgtgcaggtttactgcatgacatcggtaaagcaattgaccatgaagtggaaggaagc
cacgtcgaaattggtgtggaacttgcaactaagtacaaggaacatcctgttgtcatcaac
agtatcgcttcccaccatggagacacagaaccgacgtcaatcatcgcggttctcgtcgca
gcagcagatgccctatctgcagcccgtccgggtgcaagaagtgaaacgcttgagaattat
atccgtcgtcttgaaaagcttgaagagatttccgaatcctatgatggagtcgagaaatcc
tttgcgatccaagcaggacgtgaagtgcgcatcatggtaaggcctgaagccatcgacgat
ctggaatcccaccgtttagcaagggatatccgcaaacggatcgaagacgaactggattat
cctgggcacatcaaagtaacggtcatccgtgaaactcgggccgttgaatatgcgaaataa
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