Bacillus sp. V3: I7V34_11310
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Entry
I7V34_11310 CDS
T11035
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bacv Bacillus sp. V3
Pathway
bacv03030
DNA replication
bacv03430
Mismatch repair
bacv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bacv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I7V34_11310 (dnaE)
03430 Mismatch repair
I7V34_11310 (dnaE)
03440 Homologous recombination
I7V34_11310 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bacv03032
]
I7V34_11310 (dnaE)
03400 DNA repair and recombination proteins [BR:
bacv03400
]
I7V34_11310 (dnaE)
Enzymes [BR:
bacv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I7V34_11310 (dnaE)
DNA replication proteins [BR:
bacv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I7V34_11310 (dnaE)
DNA repair and recombination proteins [BR:
bacv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I7V34_11310 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HROB
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QTC39836
LinkDB
All DBs
Position
complement(2234074..2237427)
Genome browser
AA seq
1117 aa
AA seq
DB search
MSFVHLQVASAYSLLSSTISINGLVHKAKTLGYRSLALTDRNMMYAAIPFYKACVKVGIK
PIIGLTADIAVSDEQSFPLVLLSRNNRGYQNLLKISSAIGAKSPEGIPHKWLSSYSDGLI
AITPGLQGEIETHLLNGEEDKAKEAIQLYKRMFGEGSFYISLQKHGLKAEDTLHPLLKNI
ARENGVEMVAGNDVRYLDKQDHFAHECMNAIRDGVKLSEDERTVLETEEYYFKTKEQMTE
LFSDEVEELQNTLRIAEECTIEIPFHQQLLPKYPLPEGVTARHELTRLCEIGLSEKLEEV
TAEYLERLDYELDVIGRMGFSDYFLIVWDFMKFARERDILTGPGRGSAAGSLVSYALSIT
DVDPIKHHLLFERFLNPERVSMPDIDIDFPDHRRDEVIEYVEAKYGSLHVAQIITFGTFA
AKAALRDTGRVFGLNMKEQEQLSKLIPNQPGITLKDAYEKSKELRDLIENQELYKRLFET
ALKLEGLPRHTSTHAAGVVISEDPLVQWIPIQGSASGIHLTQYSMDILEEIGLLKMDFLG
LRNLSILERIIKNIKKGRDKRFTLERIPSNDSKTFKLLSEGQTNGIFQLESDGMRNVLTR
LKPTSFEDIVAVNALFRPGPMENIPTYINRKHGKETVEYPHPDLKPILEMTYGVIVYQEQ
IMQIASKMAGFSLGEADLLRRAVSKKKKDVLDQEREHFVKGSIQKGYSTEEAHRIYDLIV
RFANYGFNRSHAVAYSMIAYQLAYLKAHYPAYFLSALLTSVVGNETKIAQYVREAKQYGI
DILPPSVNSSQFVFSVERKEAIRYSLGAIKGIGAQVLKEIISVRKDKPFDDLFDFCMRVS
SKIINRKILENLVLAGAFDEFNIDRATLLASLDVAIQHAELVNPEDDHDLFKEEEAFLLK
PKYVEVEEMNAETKLNFEKQVLGLYLSDHPVTSYRLLLDDMGAALIVDVRQGAKASIGGF
ISSIRSIRTKKGEVMAFLEISDETGDMEAVVFPAVYRQIMTLLKEGNVLCFDGKIEERNN
KLQLIINRVQTIEEIKERSETREKKLFLRIPAADDQDASMKEIQRIIARYKGHHSVIVYI
EKDKKSIKLSDSYRIDASRDAISKLEAVLGKPNVVLT
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttgttcatttacaggtagcaagcgcttatagtttactttccagcacaatctcc
ataaatggacttgtacataaagcgaagacgctcggatatagatccctggcgttgaccgat
cgaaatatgatgtatgctgccattcctttttataaggcatgtgtgaaggtagggatcaag
ccgatcatcggtttgactgcggatatcgctgtcagcgatgaacagtcgttcccgcttgtg
ctgttgagcaggaataataggggttatcagaatctattgaagatatcgagcgcgatcggg
gcgaagtccccggaagggatccctcataagtggctcagttcctacagtgatggcctgatc
gcgatcactcccggtctgcagggtgaaattgaaacccatttactcaatggggaagaagat
aaagcaaaagaagccatacaactatacaaaaggatgttcggagaagggtctttttatatc
agtcttcaaaaacacggtttgaaggcagaagacacgctccatcccctgctgaaaaatata
gcgcgtgaaaacggtgtggaaatggtggctggaaacgatgtacggtatttggacaagcaa
gatcattttgcacatgaatgcatgaatgcaatacgcgatggtgtcaagctgtcggaagat
gaacggactgtccttgagacggaggaatactacttcaagacaaaagagcaaatgacagaa
cttttttcggatgaagtggaagagctccaaaacacgttgaggattgcagaagaatgcact
atcgaaataccgttccatcagcagctcctcccaaaatacccgctccccgaaggtgtgaca
gcccggcacgaactcaccaggctttgtgaaatcggactgagtgaaaagcttgaagaggtt
acggccgagtatctggaaaggctcgattatgaactcgatgtcatcgggcggatgggcttc
agtgattatttcctcatcgtctgggactttatgaaatttgcaagggaaagggacatcctc
accggtcctggcagggggtctgcagcgggatcgctcgtttcttatgcactcagcatcacc
gatgtcgatccgatcaagcatcatttattattcgaacgtttccttaatcctgaacgggta
tcgatgcccgacatcgatattgattttccggaccaccgaagggatgaagtgatcgagtac
gtagaagcaaaatacggatcccttcatgtcgcccagatcattacattcggtacatttgca
gcaaaggcagccctgagggatacaggcagggtattcgggttgaatatgaaagagcaggag
cagctttcgaagctgataccgaatcagcccggcataacgctgaaggatgcttatgagaaa
tccaaagagctccgtgatcttatcgaaaaccaggaattatataaacggttattcgaaacg
gcactgaagcttgaaggcctgccgaggcacacatctacacatgctgcaggcgttgtgatc
agcgaagaccctttggtgcagtggatcccgattcaagggagtgcatccggcatccatctg
acccagtattcaatggatatccttgaagaaatcggcttattgaaaatggatttcctcggt
ctcaggaatcttagcatcctcgagaggatcataaagaatataaagaagggaagggataaa
cgctttactttggaacgcatcccttcaaatgacagtaaaaccttcaaacttctcagtgaa
gggcaaaccaacggaatctttcagcttgagtcggacggcatgcgcaatgttttgacgagg
ctgaagcccacttccttcgaggatatcgtcgcggtcaacgccctgttcaggccgggcccg
atggaaaacatcccgacgtatatcaatcggaagcatggtaaggaaacggtggaatatccc
catccggacttgaagccgatccttgaaatgacatacggcgtcatcgtttatcaggagcag
atcatgcaaatcgcttcaaaaatggccggcttttcactaggcgaagccgacctgttaaga
agagccgtctcgaaaaagaaaaaagacgttctcgatcaggaaagggagcatttcgtgaaa
ggttccattcaaaaaggctattcaacagaagaggcacatcgcatttatgaccttatcgtc
cgatttgcaaattatggattcaaccgttcccatgcggttgcctatagtatgattgcctat
cagctggcatacttgaaagcccattatcctgcttactttttatctgccctccttacctcc
gtcgtcggcaatgaaacgaaaatcgctcagtatgtaagagaagcgaaacaatacggcatc
gatattctgccaccgtccgtcaacagcagccaatttgttttctctgtggagaggaaagag
gcgatcaggtacagtctcggcgcaatcaaagggatcggggcacaggtactgaaagaaatc
atctctgtaagaaaagacaagccatttgatgatttgttcgatttctgcatgagggtttcc
tcgaaaatcatcaaccggaagatattggagaaccttgtattggccggcgcctttgatgaa
ttcaatatagaccgggccaccctcctcgcaagccttgatgttgcgattcagcatgcagag
ctcgtcaacccggaggatgatcatgatctatttaaagaagaagaagcattcctgcttaaa
ccgaaatatgttgaagtagaggaaatgaacgcagaaacgaaattgaatttcgaaaaacaa
gtcctgggactttatctttcagatcatcctgtgacttcgtaccgtctgcttctggatgat
atgggagccgcattgattgtagatgtccggcagggtgcgaaagcgtcaataggcggcttt
atcagctcgatccggtcaatccgcacgaaaaagggcgaggtcatggcgttccttgaaatc
agtgatgaaacaggagatatggaagcagtcgtatttccggcggtctaccgccaaattatg
acactcctgaaagaagggaatgtgttatgttttgatggaaaaatagaggaacgcaacaat
aagctgcagcttatcatcaacagagtgcaaaccatcgaagagataaaggaacgttctgaa
acacgggagaagaaactattcttgagaattcctgctgccgatgatcaagatgccagcatg
aaggaaatacagcgcatcatcgcacgttacaaggggcatcattcggtgattgtctatatt
gaaaaagacaagaaaagtataaaactatctgattcttatagaatagatgcgtcccgggat
gcgattagtaaattagaagcagttttaggaaaacctaatgtcgttttgacataa
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