Bacillus sp. V3: I7V34_17320
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Entry
I7V34_17320 CDS
T11035
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bacv Bacillus sp. V3
Pathway
bacv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bacv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
I7V34_17320 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bacv03021
]
I7V34_17320 (rpoC)
03400 DNA repair and recombination proteins [BR:
bacv03400
]
I7V34_17320 (rpoC)
Enzymes [BR:
bacv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
I7V34_17320 (rpoC)
Transcription machinery [BR:
bacv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
I7V34_17320 (rpoC)
DNA repair and recombination proteins [BR:
bacv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
I7V34_17320 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QTC40864
LinkDB
All DBs
Position
3489451..3493050
Genome browser
AA seq
1199 aa
AA seq
DB search
MLDVNNFEYMKIGLASPDKIRSWSYGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTKAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTEPGDTALEKKQLLSEKEYRAYREKYGVKFQAAMGAEAIKKLLQ
DIDLDKEADFLKEELKTAQGQRRTRAIKRLEVVESFRNSGNDPDWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVEKGLAHNIKSAKRKIERVQPEVWDVLEEVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSSEAQAEARMLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLEREDAVGEGMVFSDANEVLLAYQNGYVHLHTRIGIN
AGTLHNKTFTEKQNSQMLLTTVGKVIFNEILPDSFPFINEPTKTNLEEVTPEHYFVEPGT
DIKEEFKNRELINPFKKGFLGNIIAEVFKKFAITETSRMLDKMKDLGFKYSSKAGITVGI
ADIVVLAEKEQILVEAQSKVDNVLKQFKRGLITEDERYDRVISIWSAAKDTIQGKLMATL
DKRNPIFMMSDSGARGNASNFTQLAGMRGLMANPAGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIVREEDCGTDRGLLVGSIKEGTEIIEPLE
ERLLGRYSRKTLRHPETDEILVDENQLITEDLAKMIVDAGIEHVSIRSAFTCNTRHGVCE
KCYGTNLATGQKVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIF
EARNPKGQAVISEMDGVITSIGEGKDRQYEITVQGDVETRSYTAPYTARLKFGVNDKVAR
GQELTEGSIDPKELLKVRDVSAVQEYLLREVQKVYRMQGVEIGDKHVEVMVRQMLRKVRV
IDAGETEVLPGTLMDIHQFRDANEKALLDGSIPATGRPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMQRYRKAEPVLAEENTEETVTVE
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
ttgctagatgtaaataactttgagtatatgaaaattggtttagcttcccccgataagatc
cgttcgtggtcttacggggaagtcaaaaaaccggaaaccatcaactatcgtactttaaag
ccggaaaaagacggcttgttctgtgaacgtattttcggtcctacaaaggactgggaatgt
cactgtggtaaatacaagcgcgtacgttataaaggcgtcgtttgtgaccgctgtggtgtt
gaagtgacaaaagcgaaagtccgccgtgaacgcatgggtcacatcgaacttgccgctcca
gtttcacatatctggtacttcaaaggaatcccaagccgtatgggtcttgttttggacatg
tccccccgtgcattggaagaagtcatttacttcgcttcttatgtagtaacagaacctggt
gatacggctcttgagaaaaagcagctgctttctgaaaaagagtaccgtgcttaccgtgag
aaatatggagtgaagttccaggcggcaatgggtgcagaagcgatcaaaaaactccttcag
gatatcgatcttgacaaagaagccgatttcttgaaagaagagctgaaaacagcgcaaggt
cagcgacgcacacgtgccatcaagcgtcttgaagtggtcgagtcattcaggaattcagga
aatgatcctgactggatgatccttgatgtacttcctgtcatccctcctgagcttcgtcct
atggttcagctggatgggggacgttttgcaacatctgatttgaacgacttatatcgtcgt
gtcatcaaccgtaacaaccgtttgaaacgtttattagatcttggtgccccaagcatcatc
gtgcagaatgagaagcgtatgcttcaagaagcagtagacgctctgatcgataacggccgc
cgcggacgtccggtaacaggaccaggtaaccgtccattgaaatctctttctcacatgctt
aaagggaagcagggacgtttccgtcaaaaccttcttggtaagcgtgttgactattcaggc
cgttctgtaatcgttgttggtccaaacctgaaaatgtaccaatgtggtcttccaaaagaa
atggcacttgaattattcaagccatttgtcatgaaagaactcgttgaaaaagggttggct
cacaacatcaagagtgcaaaacgcaaaattgaacgcgtacagccggaagtatgggatgtt
ttagaagaggtaatcaaagaacaccctgttctattgaaccgtgcacctacccttcacaga
cttggtattcaagcctttgaaccaactcttgtcgaaggccgtgcgatccgtcttcacccg
ctcgtatgtactgcatacaacgcggactttgacggtgaccaaatggcggtccacgtaccg
ctgtcttctgaagcacaggctgaagcacgcatgcttatgcttgccgctcaaaacatcctg
aaccctaaagacggtaaacctgttgttacaccatcacaggatatggtactgggtaactat
taccttactcttgaacgtgaagatgctgtcggcgaaggcatggtcttctctgatgcaaat
gaagtactgcttgcttatcaaaatggatatgtacacttgcatacacgtattggaatcaat
gcaggaacacttcataacaaaacgttcactgaaaagcaaaacagccaaatgctattaacg
acggttggtaaagtaatcttcaacgaaatcttgccggactccttcccgttcattaatgaa
ccgacaaagacgaacctggaagaagtaactccagaacattactttgtagagcctggtaca
gacatcaaagaagaatttaaaaaccgtgagttgatcaatccgttcaaaaaaggtttctta
ggaaacatcattgcagaagtattcaagaagtttgcgatcaccgaaacttcaaggatgctt
gataaaatgaaagacttaggattcaaatattcttcgaaagcaggtattacggtcggtatc
gccgacatcgtggtattggctgaaaaagaacagatcctggttgaagcacaaagtaaagta
gacaacgtattgaagcaattcaaacgtggtctgattacagaagatgagagatacgaccgt
gtcatctcgatctggagtgctgcgaaagatacgatccaaggtaagctgatggctaccctt
gataaacgcaacccgatcttcatgatgagtgactcaggtgcccgtggtaacgcatctaac
ttcactcagcttgccggtatgcgtggtctgatggccaacccggctggacgtatcattgaa
ttaccgatcaaatcaagtttccgtgaaggtctgacggtccttgaatacttcatctctacc
cacggtgcccgtaaaggtcttgccgatacagcactgaagacagccgactcaggatatctg
acacgccgtcttgtagatgtggcccaggatgtcatcgtacgtgaggaagactgtggaact
gacagaggactcctcgtcggctccatcaaggaaggcaccgagatcatcgagcctcttgaa
gagcgtcttctcggccgttactcacgcaagacattgcgtcatcctgaaacagacgagatt
cttgtcgatgagaaccagctgatcacggaagatttggctaaaatgatcgtagatgcagga
atcgaacacgtttcgatccgttctgcattcacatgtaacacccgccacggtgtatgtgag
aaatgttatggaacaaaccttgctactggtcaaaaagtagaagtgggagaagcagtcggt
atcatcgctgcacaatccatcggggaacctggtacacagcttacaatgcgtacattccat
accggtggtgttgcaggggacgatatcacccaaggtttaccgcgtatccaagagatcttc
gaagcgcgtaaccctaaaggtcaggctgtcatctctgaaatggacggtgtcattacttcc
atcggtgaaggaaaagaccgtcaatatgaaatcactgtccaaggtgatgtcgaaacaaga
agctatacagctccttatacagctcgcctcaagttcggtgtcaacgataaagttgcccgc
ggacaagagcttactgaaggttcgatcgatccgaaagaattacttaaagtacgtgacgta
tctgccgttcaagaatacttgctgcgcgaagtacaaaaagtatatcgtatgcaaggggtt
gaaatcggcgataagcacgtagaagtaatggttcgtcaaatgcttcgaaaagttcgtgtg
atcgacgctggtgaaactgaggtacttccaggtactcttatggacattcatcagttcaga
gatgcgaatgaaaaagcattgcttgatggaagcatcccggcaacaggcagacctgtattg
ctcggaatcacaaaagcttcccttgagacggattccttcttatctgcagcttcattccaa
gaaacaacccgcgtgttgacggatgctgcaattaaaggaaaacgcgatgagcttctagga
ttgaaagaaaatgttatcatcggtaaactggttcctgctggtacaggtatgcagcgttac
cgcaaggcagaacctgtcctcgctgaagaaaacacggaagagacagtgactgtagagtaa
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