Bacillus sp. V3: I7V34_18675
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Entry
I7V34_18675 CDS
T11035
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
bacv Bacillus sp. V3
Brite
KEGG Orthology (KO) [BR:
bacv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bacv03009
]
I7V34_18675 (rlmD)
Enzymes [BR:
bacv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
I7V34_18675 (rlmD)
Ribosome biogenesis [BR:
bacv03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
I7V34_18675 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
PrmA
Methyltransf_25
TRM5-TYW2_MTfase
MTS
Methyltransf_15
Methyltransf_11
RrnaAD
N6_N4_Mtase
Methyltransf_12
Methyltransf_23
TPMT
Motif
Other DBs
NCBI-ProteinID:
QTC41086
LinkDB
All DBs
Position
3753640..3755013
Genome browser
AA seq
457 aa
AA seq
DB search
MSKKAPVQKNDYIDGAYFEDLTHDGNGVTKVDGYPLFVPNALPGEEGTVKVVKPSKGYGF
GRLMERTKESPYRQEPPCPIYRECGGCQIQHMTYEGQLRAKEKNVRDVMQRIGKLQDVKI
HEVLGMEEPWRYRNKAQVPVGEKDGRFVAGFYQKRSHEIIDMDKCIIQYEKNDEVIQHVK
DICQNLGIRPYDEKKHKGTLRHIMTRTAYTTGEVMVVLVTRTNELPHKNEIVEELVRNIE
GLKSIIHNVNGKKTNVIMGDTTRVLWGEEVIHDRIGDVKFAISARSFYQVNPEQTKVLYD
KALEYADLKGEETVIDAYCGIGTISLFLAQTAKKVYGVEIVPQAIADAKQNAVLNNMTNV
EFKAGPAEVVIPEWYDDGISADVLVVDPPRKGCDEALLDTILTMKPKKVVYVSCNPATLA
RDLRILEDGGYKTTEIQPVDMFPQTMHCEAVAKIELV
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaaagcacctgttcaaaaaaatgattatatagatggcgcctatttcgaggat
ttgacgcatgatgggaacggcgtgacgaaggtggacggctaccctttattcgttcccaat
gcgctgcccggtgaagaaggcacggtgaaggtcgtaaaaccaagtaaaggatacgggttc
gggcgtttgatggaacggacgaaggaaagtccttaccgccaggaacctccgtgtccgatt
tacagggagtgcggcggctgccagatccagcatatgacctacgagggccagctcagagcg
aaagagaagaatgtacgcgatgtgatgcagcggattggtaagcttcaagacgtcaagatc
catgaagtgcttgggatggaagagccctggagataccggaataaagcacaggtgcctgtc
ggtgaaaaagacgggcgctttgtggcaggcttttatcagaagcgaagccatgaaatcatc
gatatggacaaatgcatcatccaatatgaaaaaaatgatgaagtgatccagcacgttaag
gatatctgtcaaaacctcggcatacgtccatatgatgaaaagaaacataaggggacgctc
cgccacatcatgacccgcacggcatacacgacaggggaggtcatggtcgtccttgttaca
agaacgaatgagcttccccataagaatgaaattgtggaagagctcgtccggaatattgaa
ggattgaaatccatcatccacaatgtgaacgggaaaaagacgaacgtgatcatgggtgat
acgacacgcgtcctctggggcgaagaagtcatccacgatcggatcggagacgtgaagttt
gcgatttctgcccggtccttctatcaggtcaaccctgagcagacgaaggtgctgtatgac
aaggcactcgagtacgcagatctcaaaggggaagaaacggtcatcgatgcatactgcgga
atcgggaccatctcgcttttcctggcccagacagcaaagaaagtgtatggagtggaaatc
gtcccgcaggcgattgccgatgcaaaacagaatgcggtcctgaacaatatgacgaacgtt
gaattcaaggcaggaccggcagaagtcgtcatccctgaatggtatgatgacgggatcagc
gccgatgtgctcgtcgtcgatccgccgagaaaaggatgcgatgaagcacttctcgacacc
atcctcaccatgaaaccgaaaaaggtcgtatatgtttcctgcaaccctgcaacattggca
cgcgatctgcgcattttggaagacggcgggtataaaacaactgaaatccagccggtcgac
atgttcccgcagacgatgcactgtgaggcagtcgcgaaaatagaattggtataa
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