Bacillus sp. WP8: QR42_00685
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Entry
QR42_00685 CDS
T03530
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bacw
Bacillus sp. WP8
Pathway
bacw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bacw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QR42_00685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bacw03021
]
QR42_00685
03400 DNA repair and recombination proteins [BR:
bacw03400
]
QR42_00685
Enzymes [BR:
bacw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QR42_00685
Transcription machinery [BR:
bacw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QR42_00685
DNA repair and recombination proteins [BR:
bacw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QR42_00685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
Peptidase_M23
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
AIZ58881
LinkDB
All DBs
Position
128897..132496
Genome browser
AA seq
1199 aa
AA seq
DB search
MLDVNNFEYMNIGLASPDKIRSWSFGEVKKPETINYRTLKPEKDGLFCERIFGPQKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTDPGNTPLEKKQLLSEKEFRAYLDKYGNTFQAAMGAEAINKLLQ
DIDLVKEVDTLKEELKTAQGQRRTRAIKRLEVLEAFRNSGNKPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPHLKMYQCGLPKE
MALELFKPFVMKELVEKGLAHNIKSAKRKIERVQPEVWDVLESVIREHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARILMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLERKGAIGEGMVFKDTDEALLAYQNGYVHLHTRVAVA
ASSLKNVTFTDEQRSKLLITTVGKLIFNEILPESFPYMNEPTKSNIEEKTPDRFFLEKGE
DVKAAIEKQEINAPFKKGILGKIIAEIFKRFHITETSKMLDRMKNLGFRYSTKAGITVGV
SDIVVLDDKQQILEEAQAKVDNVMKQFRRGLITEEERYERVISIWSSSKDVIQGKLMKSL
DEVNPIYMMSDSGARGNASNFTQLAGMRGLMANPAGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIIRETDCGTDRGILAKSIKEGNEIIEKLE
ERLIGRFARKPIVHPETGEVIVAENELIDEDKALEVVEAGIEEVWIRSAFTCNTPHGVCK
RCYGRNLATGTDVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQELF
EARNPKGQATISEIDGVVAEINDVRDKQQEIVVQGEVETRSYTAPYNARLKVVEGDKVTR
GQVLTEGSIDPKELLKVTDMTAVQEYLLHEVQKVYRMQGVEIGDKHVEVMVRQMLRKVRV
ADAGDTDVLPGTLLDVHQFTEANKKVLFEGKRPATGRPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMPNYRKVKPVSQVQPSDDMVPVE
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
ttgctagatgtgaacaattttgagtatatgaacatcggtctcgcatcacctgataaaatc
cgttcttggtcttttggtgaagtgaaaaagcctgaaacgattaactatcgtacactgaaa
cctgaaaaagatggtctcttttgtgaacgtatcttcggaccacaaaaagactgggaatgt
cattgtgggaagtataaacgcgttcggtataagggtgttgtatgtgaccgttgtggtgta
gaagtaacacgggcaaaagtccgtcgtgagagaatggggcatatcgaactggctgcccca
gtttcccacatttggtatttcaaaggtatcccaagccgtatgggtcttgttcttgatatg
tcaccacgtgcgttagaagaagtgatctacttcgcttcttacgtcgtgacagatccgggc
aacacaccgctggagaagaaacaacttctttctgagaaagaattccgtgcttatttagat
aaatacggtaatacattccaagcagctatgggtgcagaagcaatcaacaaacttcttcaa
gatatcgatcttgtaaaagaagtagatacactgaaagaagagctgaaaactgctcaagga
cagcgtcgtacacgtgcgatcaaacgccttgaggtattagaagccttccgtaactcagga
aacaaaccatcttggatgattcttgatgtacttccggtgattccgccagaattacgtcca
atggttcagcttgatggtggacgttttgctacttctgacttgaacgacctttatcgtcgt
gtcatcaaccgtaacaatcgtctgaagcgtttattagatcttggcgcgccaagcatcatc
gttcagaacgagaagcgtatgcttcaagaagctgtcgatgccttgattgataatggacgt
agaggccgaccagtaacaggaccaggaaatagaccattgaaatctctttctcacatgctg
aaagggaaacaaggacgtttccgtcaaaacttgcttggtaaacgtgttgactattctgga
cgttccgttatcgtcgtaggaccacatttgaaaatgtatcagtgtggacttccgaaagaa
atggctcttgaattattcaaaccattcgtgatgaaggagcttgttgaaaaaggattagct
cacaacatcaagagtgcgaagcgtaaaatcgagcgcgtgcagccagaagtatgggatgtt
ttagaatcagttattcgtgagcatccagtcttactaaaccgcgcaccgactcttcacaga
cttggtattcaagcgtttgaacctacacttgtggaaggacgcgcaattcgtctgcatcca
cttgtatgtacagcctacaacgctgactttgacggtgaccaaatggcggttcacgtacca
ttatctgctgaagctcaagctgaagctcgtatcttaatgcttgctgctcaaaacattttg
aacccgaaagatggaaaaccagttgttacgccatctcaggatatggtgcttggtaactac
taccttacacttgagcgcaaaggtgctatcggagaaggtatggtcttcaaagatactgac
gaagcccttcttgcttatcaaaatggttatgtgcatcttcatacacgtgtagctgttgca
gctagctcgttgaagaatgtgacattcactgatgaacagcgttctaaattgttgattaca
acagttggaaaactgatctttaacgaaatcttaccggaatcattcccatacatgaatgag
ccgacaaagagcaatattgaagaaaaaacgcctgatcgtttcttccttgaaaaaggtgag
gatgtaaaagctgcgatcgagaaacaagaaatcaatgcaccgttcaaaaaaggtatttta
ggtaaaatcattgcagaaatctttaagagattccatatcactgagacatctaaaatgctt
gaccgcatgaaaaatcttggtttcagatactctactaaagccggtattacggttggtgtg
tctgatatcgtcgtattagatgataagcagcaaattcttgaagaagcacaagcaaaagta
gataacgtcatgaagcaattcagacgtggtttgattactgaagaagagcgttatgagaga
gttatttcaatctggagttcttctaaagatgtcatccaaggtaaactgatgaagtccctt
gatgaagtcaacccaatctacatgatgagtgactctggagcgcgtggtaacgcatctaac
ttcactcagctggctggtatgcgtggtctgatggccaacccggctggacgtatcattgaa
cttccgattaaatctagtttccgtgaaggtttaaccgtattggaatactttatttccact
cacggtgcgcgtaaaggtcttgccgatacagctcttaaaacagctgactcaggttacctc
acgcgtcgtctcgttgacgttgcacaggatgtcatcatccgtgaaacagattgcggaaca
gaccgtggaatcttggcgaagtccattaaagaaggaaatgaaattattgagaagcttgaa
gaacgtctgatcggacgttttgcaagaaaaccaattgttcatcctgaaacaggcgaagtc
attgtagccgaaaacgaactaattgatgaagataaagcacttgaagtagttgaagcagga
attgaggaagtatggatccgttctgcatttacatgtaacacgcctcatggtgtatgtaaa
cgatgctacggccgtaaccttgcaactggtactgacgttgaagtcggtgaagcagttgga
atcatcgctgcacaatcaatcggtgagccaggaactcagcttacaatgcgtacgttccac
accggtggggtagcaggagacgatatcactcaaggtttacctcgtatccaagagctgttt
gaagcgcgtaatccgaaagggcaagcgacaatttctgaaattgacggtgtcgttgctgaa
attaacgatgttcgtgacaagcagcaggaaattgtggttcaaggcgaagttgaaactcgc
tcttacacagctccttacaatgcacgtctaaaagttgttgaaggtgacaaagtcactcgt
ggtcaagtgcttacagaaggttcaatcgatccgaaagaacttcttaaagtgactgacatg
acagctgttcaagaatatctgcttcatgaagtacaaaaagtataccgtatgcaaggggta
gaaatcggagataagcacgtagaggtaatggttcgccaaatgcttcgtaaagtgcgtgtc
gctgatgcaggggatacagatgtattaccaggcacacttcttgatgtacatcaattcact
gaagcaaacaaaaaagtactattcgaaggcaaacgtcctgcaacaggtcgtccagttctt
cttggtattacaaaagcttcgcttgaaacagactcattcttgtctgcggcatccttccaa
gaaacgactcgtgtcctaacagatgcagcgatcaaaggaaaacgtgatgaactgcttggc
ttgaaagagaatgttatcattggtaaacttgttcctgctggaacgggaatgccgaactac
cgtaaagttaagccggtttcgcaagtgcagccgtctgacgacatggttcctgtagagtaa
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integrated database retrieval system
