Bacillus sp. WP8: QR42_02575
Help
Entry
QR42_02575 CDS
T03530
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bacw
Bacillus sp. WP8
Pathway
bacw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bacw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QR42_02575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bacw03019
]
QR42_02575
03009 Ribosome biogenesis [BR:
bacw03009
]
QR42_02575
Enzymes [BR:
bacw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QR42_02575
Messenger RNA biogenesis [BR:
bacw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QR42_02575
Ribosome biogenesis [BR:
bacw03009
]
Prokaryotic type
rRNA helicases
QR42_02575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DeaD_dimer
NAT10_TcmA_helicase
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
AIZ59218
LinkDB
All DBs
Position
546855..548354
Genome browser
AA seq
499 aa
AA seq
DB search
MTITFQDFQLSESLMKAINRMGFEEATPIQAETIPLGLQNKDVIGQAQTGTGKTAAFGIP
LVEKIDPASPNIQAIIIAPTRELAIQVSEELYKIGQDKRARVLPIYGGQDIGRQIRSLKK
NPHIIVGTPGRLLDHINRRTMRLQNVETVVLDEADEMLNMGFIEDIEAILSNVPSEHQTL
LFSATMPAPIKRIAERFMTNPEHVKVKAKEMTVSNIQQFYLDIHERKKFDTLTRLLDIQS
PELSIVFGRTKRRVDELTEALNLRGYTAEGIHGDLTQAKRMVALRKFKEGSIDVLVATDV
AARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGRTGMAMTFITPREKDMLRAIEQTT
KRKMDRMKEPTLDEAIEGQQQVTVDRLRTIISENNLNFYMTAAAELLEDHDSVTVVAAAI
KMMTKEPDATPVRLTDEAPMISKRHRNNRSSSKRRDGGGGGGYRGKGKNSRSSYGDKKRS
SNDRNRSSNDRRQKKSYNN
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
ttgactataacgtttcaagattttcaattaagcgaaagtctcatgaaggctattaaccgc
atgggatttgaagaagcaacaccgattcaagcagaaacgattcctctcggccttcaaaat
aaagatgtcatcggacaagcacaaacaggtacaggaaaaactgcagcatttggtattcct
ctggttgaaaaaatcgacccagcgtctccaaatatccaagcgattatcattgcgccaaca
agagaattagcgattcaagtatctgaagagctatataaaatcggccaagacaagcgtgca
cgcgtacttcctatttacggtggacaagatatcggccgtcaaatccgttcgctcaagaaa
aatcctcatatcatcgtagggactccaggacgtttactcgatcacattaaccgtcgtaca
atgcgtcttcaaaatgttgaaacagtcgtgctagatgaagcagacgaaatgctaaacatg
ggtttcatcgaagacattgaagcgatcctttcaaatgtaccaagtgaacaccaaacactt
ttattctctgcgacaatgcctgcaccaattaagcgcattgcagagcgtttcatgacaaac
ccagaacacgtaaaagtaaaagcgaaagaaatgactgtatctaacatccaacagttctat
ttggatattcacgaacgtaagaagtttgatacattgactcgtcttcttgacattcaatca
cctgagctctcaattgtcttcggccgtacgaaacgccgtgttgacgaattgactgaagca
cttaacctaagaggttatacagctgaaggaattcatggtgacctgactcaagcaaaacgt
atggttgcgcttcgtaaattcaaagaaggttcaatcgatgtgcttgtcgcaacagacgtt
gcagcacgtggacttgatatctcaggcgtcacacacgtgtataacttcgacgtgccgcaa
gatccagaaagctatgtacaccgtattggacgtactggacgtgctggacgtacaggtatg
gcgatgacattcatcacaccacgtgaaaaagatatgcttcgtgcgattgagcaaacgact
aaacgtaaaatggatcgtatgaaagaacctacacttgatgaggcaattgaaggacaacag
caagtaacagttgaccgtctacgcacgatcatcagtgaaaacaacttgaacttctacatg
acagctgctgctgaattgctggaagatcatgattctgtaacagtggttgcagctgctatc
aaaatgatgacaaaagagccggatgcaacgcctgttcgtttgacagatgaagcaccaatg
atttcaaaacgtcatcgtaacaaccgcagctcttctaaacgcagagacggcggcggtggc
ggaggctaccgtggaaaaggcaagaacagccgttcatcttatggtgataaaaagcgttct
tcaaatgaccgcaatcgttcttctaacgatcgtcgtcaaaagaaatcttataacaactaa
DBGET
integrated database retrieval system
