Bacillus sp. WP8: QR42_09425
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Entry
QR42_09425 CDS
T03530
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bacw
Bacillus sp. WP8
Pathway
bacw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bacw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QR42_09425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bacw03019
]
QR42_09425
03400 DNA repair and recombination proteins [BR:
bacw03400
]
QR42_09425
Enzymes [BR:
bacw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QR42_09425
Messenger RNA biogenesis [BR:
bacw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QR42_09425
DNA repair and recombination proteins [BR:
bacw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QR42_09425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
AIZ60471
LinkDB
All DBs
Position
complement(1916290..1918092)
Genome browser
AA seq
600 aa
AA seq
DB search
MLEQAEALLKQYFGFDTFRQGQKQAIESIVNKQKDTVCIMPTGGGKSVCYQIPALMMEGT
TIVVSPLISLMKDQVDALNEMGIRSSFLNSTLSAAEMNKRLKKCADGEYQLLYITPERLQ
NERFFQLLDRLTIPLIAIDEAHCISEWGHDFRPSYRFIQECLDKLTKRPVIVALTATATK
KVHRDICEQLGMNEEETIFTGFARENLSFQVVKGENSDRFITHYMKKNKLESGIIYTATR
KEAENIYNRLKKQKIKAGIYHGGLDDDVREEQQNLFLNDDIQVMVATSAFGMGINKSNVR
FVIHHQIPRDIESYYQEAGRAGRDGLESECILLFSPQGVRMQRFLIEQSTEDEVRYQHEL
LKLRQMVDYCHTEQCLQQFVMDYFDQSTSTPCQKCSNCLDEREREEVTREAQMVLSCTVR
MNERFGKMMIAQVLAGSKNKKVLDLGFDRLPTYALMKQQSAQQISDFIEFLITEEYLHMS
EGAYPTLKVTHKGKKVLVGQEAVYKKQAVKREAIQENDALFEQLRAVRMKLAREQGVPPF
VVFSDQTLKEMSAVQPKTEEELLHIKGIGAQKREKYGDVFLEEIRLFIEKEKNKEVEEEK
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgttagaacaagcagaagcactcctgaaacaatactttggctttgacacctttaggcag
ggacagaaacaagccattgaatcgattgtaaacaaacagaaggataccgtttgtattatg
ccgacaggcggagggaaatcggtttgttaccagattcctgccctgatgatggaaggaaca
acgatcgttgtatccccgctaatttctttaatgaaagatcaagtcgatgcactaaatgaa
atgggcatacgatcgtcctttttaaacagcacactttctgcagctgaaatgaataaaagg
ctgaaaaaatgtgcagatggggaatatcagctgctttatatcacacctgaacgtttacaa
aatgaacgtttttttcagctccttgatcggttaacgatccctttaatcgcaattgatgaa
gcgcactgtatatctgagtgggggcatgattttaggccaagctatcgctttattcaagaa
tgcttagataaattgacaaaaaggccagtgatagtcgcgctaacggctacagccacgaaa
aaggtccaccgagatatatgtgaacagcttggcatgaacgaagaagaaaccatttttact
gggtttgctagagagaatttgtcttttcaggtggtcaaaggagaaaatagtgaccgcttt
atcacacattatatgaagaaaaacaagcttgagtccggcattatctatacagctacaaga
aaagaagctgaaaacatttacaatcggctaaagaaacaaaagatcaaagctggcatttat
catggcgggttagatgacgatgtgagagaagagcagcaaaacctgtttttaaatgatgac
atccaggtcatggtcgctacatctgcatttggcatgggaattaataaatcaaatgtccgt
tttgtcattcatcatcaaattccaagggatattgaaagctactatcaagaagctgggcgc
gcaggtagagacggtcttgaaagtgaatgtattttactgttttcgccgcagggcgtacga
atgcagcgcttcctcattgaacagtcaacagaagatgaagtgcgctatcagcatgaactg
cttaaactaagacaaatggtggattactgtcatactgagcaatgtttgcagcaatttgtg
atggactactttgatcaatcaacaagtactccttgccaaaaatgcagcaattgccttgat
gaaagagagcgtgaagaggtcactcgagaagcgcaaatggttttatcgtgtacggttaga
atgaacgagcgatttggaaaaatgatgattgctcaagtactggcaggctctaaaaataaa
aaagtgcttgatcttggtttcgaccgtcttcctacatacgctttaatgaagcagcaatca
gcccagcaaatcagtgatttcatcgaattcctaattacagaagagtatttgcacatgtct
gaaggggcttatccaacattaaaagtgacacataaagggaagaaagtgttagtcggacaa
gaggctgtgtataaaaaacaggcagttaaaagagaggcgattcaagaaaacgatgcatta
tttgagcagctgagagcggtgagaatgaagctggcgagagagcagggcgttccgccattt
gttgtattttctgatcaaaccttgaaggaaatgtcagcagttcagcctaaaacagaagaa
gaacttctccatattaagggaataggcgctcaaaaaagagagaaatacggggatgttttt
ctagaagaaatccgtttatttatagaaaaagagaaaaataaagaggttgaagaagaaaaa
taa
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