Bacillus sp. WP8: QR42_12870
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Entry
QR42_12870 CDS
T03530
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bacw
Bacillus sp. WP8
Pathway
bacw03030
DNA replication
bacw03410
Base excision repair
bacw03420
Nucleotide excision repair
bacw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bacw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QR42_12870
03410 Base excision repair
QR42_12870
03420 Nucleotide excision repair
QR42_12870
03440 Homologous recombination
QR42_12870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bacw03032
]
QR42_12870
03400 DNA repair and recombination proteins [BR:
bacw03400
]
QR42_12870
Enzymes [BR:
bacw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QR42_12870
DNA replication proteins [BR:
bacw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
QR42_12870
DNA repair and recombination proteins [BR:
bacw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
QR42_12870
NER (nucleotide excision repair)
GGR (global genome repair) factors
QR42_12870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
HHH
Motif
Other DBs
NCBI-ProteinID:
AIZ61116
LinkDB
All DBs
Position
complement(2557884..2560523)
Genome browser
AA seq
879 aa
AA seq
DB search
MTDKKKLVLVDGNSLAYRAFFALPLLSNDKGVHTNAIYGFAMILMKMLEDEKPTHMLVAF
DAGKTTFRHETFKEYKGGRQKTPPELSEQMPFIRELLDAYQVKRYELPQYEADDIIGTLA
VEAEKDGFEVKIFSGDKDLTQLSTDHTTVAITKKGITEVEYYTPAHIEEKYGLRPDQIID
MKGLMGDSSDNIPGVPGVGEKTAIKLLKQFETVENLLEHIDEVSGKKLKEKLEEYKEQAV
MSKQLATILVEAPIDVSSKDLAYEGPHMDQVISLYKELGFQTLLERLGETPETGEQVEVE
ALEVKKMTDVTDEMLTDHAALVVEQLGDNYHEADLIGFAIHNENGAFFITKEDALQSDAF
KQWVQDETKKKWVFDSKRAVVALRWHDVDLKGVDNDVLLASYVVNPQKSYEDVASVAKEY
GLNIAFSDEKVYGKGAKQAIPPEDELKEHLGRKAAAISALHDLTLEALEKNDQHELYEDL
ELPLALILGEMESLGVKVDIERLEKMGEELAKKLKEYEETIHRLAGETFNINSPKQLGVI
LFEKLGLPIIKKTKTGYSTSADVLEKLEDKHEIIRSILHYRQIGKLQSTYVEGLMKVTRK
DTHKVHTRFNQALTQTGRLSSTDPNLQNIPIRLEEGRKIRQAFVPSKEGWLMFAADYSQI
ELRVLAHISQDENLIEAFTQDMDIHTKTAMDVFHVSEEEVTSSMRRQAKAVNFGIVYGIS
DYGLSQNLGITRKEAAAFIERYLTSFKGVKTYMEEIVQEAKQKGYVTTLLKRRRYIPDIT
SRNFNIKSFAERTAMNTPIQGSAADIIKKAMIDMARKLKEENLQANLLLQVHDELIFEAP
KEEIAILEKIVPEVMENALQLDVPLKVDFASGPSWYDAK
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgacagacaaaaagaaattagtactagtggatggaaacagtctcgcttatcgagctttt
tttgctttgccgctattatcaaatgataaaggcgtccatacaaatgccatttatggcttt
gcaatgattttaatgaagatgctcgaggacgagaagccaacccatatgctcgtcgcattt
gatgcggggaaaacaacgttccgccacgagacatttaaagaatataaaggcggaagacaa
aaaacgccgccagagctatcagaacaaatgccgtttatccgtgaactattagatgcctat
caggtgaaaaggtacgagcttcctcaatacgaggctgacgatattatcgggacattggct
gtggaggcagaaaaagacggctttgaagtgaaaattttctcaggagataaggacttaacg
cagctctcaacagaccatacgacggtagcaattacgaaaaaaggcattacagaagtagaa
tattacacaccggctcatattgaagaaaaatatggtctgcgcccagatcaaatcatcgac
atgaaaggcttgatgggagattcctcagataatatcccaggggtgcccggtgtaggggaa
aaaacagcgataaaattgttaaagcagtttgaaacggtagaaaacctgcttgaacatatt
gacgaagtcagtggtaaaaaactcaaagaaaagcttgaagaatataaagagcaagcggtg
atgagtaaacaactcgcaacgattcttgtagaagcgccaattgatgtatcaagcaaggat
ctcgcatatgaaggtcctcatatggatcaagtgatctctctttataaagaactaggcttt
caaacgctgctagagcgtctaggagaaacaccagaaacaggtgaacaggtcgaagttgaa
gcattagaagtgaaaaaaatgactgatgtaacggatgaaatgctgacagatcacgccgcc
cttgtggtagaacagcttggagataattatcatgaagcggatttgatcggttttgcgatc
cataatgaaaacggtgcgttttttatcacgaaagaagatgcacttcaatcagatgcattt
aaacaatgggtacaggatgaaacgaagaagaaatgggtcttcgattcaaaaagagcagtt
gtcgccctcagatggcacgatgtcgatctaaaaggtgtcgataacgatgtcctgctcgct
tcctatgtcgtcaatcctcagaaatcctatgaggacgtcgccagtgtggcgaaggaatac
ggcctgaacatcgcattttctgatgaaaaagtgtacggaaaaggagcaaagcaggcgatc
ccacctgaagatgaactgaaggaacatcttggacgaaaagcagcggcgatctctgctctg
catgatttaacacttgaagcactagaaaaaaatgatcaacatgaactgtatgaagactta
gagctgccgcttgccctcatcttaggtgaaatggaatcacttggcgtaaaggtagatatt
gagcgcctagagaagatgggtgaagagttagcgaaaaagctgaaagaatatgaggaaacc
attcaccgcttagcaggtgaaacgtttaacatcaattctcctaaacagcttggcgtgatt
ctttttgaaaaattaggtctgccgattattaaaaagacaaaaacaggctactcgacatct
gcggatgttcttgaaaagcttgaagataagcacgaaatcattcggtctattctgcattac
cgccaaattggaaagctccaatcgacctatgtggaaggcttaatgaaggtaacgcgcaag
gatacacataaagtgcatacacgatttaatcaagcgctcacgcaaacaggaagactaagc
tcaacagatcccaacttgcaaaacatcccaattcgtttagaggaaggacggaagattcgt
caagcattcgttccatcaaaagaaggctggcttatgtttgctgctgactattcacaaatt
gagctgcgtgtactcgctcatatttctcaggatgagaatttgatcgaagcgtttacgcaa
gatatggatattcacacgaaaacagcgatggacgtgttccatgtctcagaagaagaagtg
acttcctctatgagaagacaagccaaggctgtcaacttcggaattgtatatggaatcagt
gactatggattatctcaaaatcttgggatcacaagaaaagaagcagctgcctttatcgaa
cgctatttaacaagctttaaaggcgtgaaaacctatatggaagagattgtgcaggaagcg
aaacaaaaaggatatgtcacgacacttctcaaacgcagacggtatatcccggatatcacc
agccgtaattttaatatcaaaagctttgcggaaagaacagccatgaacacaccgatccaa
ggaagtgcagctgatattattaaaaaagccatgattgatatggcgcgtaagttaaaagaa
gaaaacttgcaggcaaatcttttattacaggtgcacgatgaattgatcttcgaagcgccg
aaagaagaaattgccatactcgaaaaaattgtccctgaagtcatggaaaatgcacttcag
ctagatgtgccgctaaaagttgattttgcttcaggcccatcttggtacgacgcaaaataa
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