Bacillus sp. WP8: QR42_13045
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Entry
QR42_13045 CDS
T03530
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bacw
Bacillus sp. WP8
Pathway
bacw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bacw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QR42_13045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bacw03019
]
QR42_13045
03009 Ribosome biogenesis [BR:
bacw03009
]
QR42_13045
Enzymes [BR:
bacw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QR42_13045
Messenger RNA biogenesis [BR:
bacw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QR42_13045
Ribosome biogenesis [BR:
bacw03009
]
Prokaryotic type
rRNA helicases
QR42_13045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UTP25_NTPase-like
SUKH_5
Motif
Other DBs
NCBI-ProteinID:
AIZ61150
LinkDB
All DBs
Position
2596956..2598398
Genome browser
AA seq
480 aa
AA seq
DB search
MTLQHFDQYPLSDELKQALEALHFHTPTPVQHETLSVAFSKQDLIVKSQTGSGKTAAYGL
PICEMVDWAENKPQALILVPTRELAMQVKQDLTSLGRFKRIKAAAIFGKASFQAQKVELS
QKNHIVCGTPGRILDHLEKGTLSLENLKFFVLDEADEMLNMGFIDQVSSIIQYLPPKRMS
MLFSATMSEDMKKLSEQFLQSPKIIEIAREETSVQQITHTVIETEEESKFSLLQRTIVIE
NPDSCIIFCNTQDRVNELTMKLDEWDVPCDKIHGGMRQEDRFDVMDEFKKGEFRYLIATD
IAARGIDVSDMTHVIHYDLPYEKERYIHRTGRTGRAGKSGKTIAFMTKNAKPLIDELKQD
AGIDFQTQPYPTKEEAEKHVESFEEKIETPVQKENKQAGVEKDIMKLYFNGGKKKKLRAV
DFVGTIAKLDGVAFDDIGIITIQDTKTYVDILNGKGPLVLNAMRHTTIKGKQLKVHEARS
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgacattacaacattttgatcaatatccattaagtgatgaattgaaacaagcgctagaa
gcgcttcacttccatacacctacacccgttcagcacgagacattatctgttgctttttca
aagcaggatttaatcgtcaaatctcagactggcagcggcaagactgcagcatatggtctg
ccgatttgtgaaatggttgattgggctgaaaataagcctcaagcccttatcctcgttccg
acacgagaactcgccatgcaggtcaaacaagacctcacaagccttggacgattcaaacga
atcaaagccgcagccatttttggaaaagcctcttttcaagcgcagaaagtagagctttca
cagaaaaatcatattgtgtgcgggacaccaggccgcattttggatcaccttgagaaaggc
accctttctttagaaaatctcaaatttttcgtgttagatgaagcggatgaaatgctgaac
atgggatttatcgatcaggtttcttctattattcagtatctgccgccaaagcgcatgtcg
atgctattttcagcgacaatgtctgaagatatgaagaaattgagcgaacaatttttacaa
tcaccgaaaatcattgagatcgcacgtgaagaaacgtctgtacagcaaatcacccatacc
gtaattgaaacagaagaggaatcgaaattctcccttcttcagcggacgatcgtcattgaa
aatccagatagctgcattattttctgtaatacacaggaccgggtgaatgaactcacgatg
aagctggatgaatgggatgtgccctgtgacaaaattcacggcggcatgagacaggaagac
cgctttgatgtgatggatgaatttaaaaaaggtgaattccgttatctgatcgcaacagat
atagcagcccggggaattgatgttagtgatatgacacatgtcattcattatgatcttcct
tatgaaaaagagcgctatattcaccgaactggtagaacaggcagagcgggaaaaagcgga
aaaacgattgcgtttatgacaaagaatgctaagccgcttattgatgaattaaagcaggat
gccggcatagattttcaaactcagccttatccaacgaaggaagaagcagagaagcatgta
gaaagctttgaagaaaagattgaaacgcctgttcaaaaggaaaataaacaggcaggcgtt
gagaaggatattatgaagctttattttaacggcggaaagaaaaagaagctgcgagctgtt
gatttcgttgggaccattgccaaattagatggcgttgcattcgatgacattgggattatt
acgattcaagacacgaaaacatatgtagatattttaaacggcaaaggtcctcttgtgctg
aatgccatgcgccacacaaccattaaaggcaagcagttaaaagtacatgaagcacgttca
taa
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