Bacillus sp. YP1: QF06_02675
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Entry
QF06_02675 CDS
T03701
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
bacy
Bacillus sp. YP1
Pathway
bacy00040
Pentose and glucuronate interconversions
bacy01100
Metabolic pathways
bacy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bacy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
QF06_02675
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
QF06_02675
Enzymes [BR:
bacy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
QF06_02675
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
AJO57406
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Position
568988..570250
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AA seq
420 aa
AA seq
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MKKVMLATALFLGLTPAGVNAADLGHQTLGSNDGWGAYSTGTTGGAKASSSNVYTVSNRN
QLVSALGKETNTTPKIIYIKGTIDMNVDDNLKPLGLNDYKDPEYDLDKYLKAYDPSTWGK
KEPSGTQEEARARSQKNQKARVMVDIPANTTIVGSGTNAKVVGGNFQIKSDNVIIRNIEF
QDAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKY
QHHDGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYKNIVQR
APRVRFGQVHVYNNYYEGSTSSSSYPFSYAWGIGKSSKIYAQNNVIDVPGLSAAKTISVF
SGGTALYDSGTLLNGTQINASAANGLSSSVGWTPSLHGSIDASANVKSNVINQAGAGKLN
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagtgatgttagctacggctttgtttttaggattgactccagctggcgtgaac
gcagctgatttaggccaccagacgttgggatccaatgatggctggggcgcgtactcgacc
ggcacgacaggcggggcaaaagcatcgtcctcaaatgtgtataccgtcagcaacagaaac
cagcttgtctctgcattagggaaggaaacgaacacaacgccaaaaatcatttatatcaag
ggaacgattgacatgaacgtagatgacaatctgaagccgcttggtctaaatgactataaa
gatccggagtatgatttggacaaatatttgaaagcctatgatcctagcacatggggcaaa
aaagagccgtcgggaacacaagaagaagcgagagcacgctctcagaaaaaccaaaaagca
cgggtcatggtggatatccctgcaaacacgacgatcgtcggttcagggactaacgctaaa
gtcgtgggaggaaacttccaaatcaagagtgataacgtcattattcgcaacattgaattc
caggatgcctatgattattttccgcaatgggatccgactgacggaagctcagggaactgg
aactcacaatacgacaacatcacgataaacggcggcacacacatctggattgatcactgt
acatttaatgacggttcgcgtccggacagcacatcaccgaaatattatggaagaaaatat
cagcaccatgacggccaaacggatgcttccaacggtgctaactatatcacgatgtcttac
aactattatcacgatcatgataaaagctccattttcggatcaagtgacagtaaaacctcc
gatgacggaaaattaaaaattacgctgcatcataaccgctacaaaaatattgtccagcgc
gcgccgagagtccgcttcgggcaagtgcacgtatacaacaactattatgaaggaagcaca
agctcttcaagttatcctttcagctatgcatggggaatcggaaagtcatctaaaatctat
gcccaaaacaatgtcattgacgtaccgggactgtcagctgctaaaacgatcagcgtattc
agcgggggaacggctttatatgactccggcacgttgctgaacggcacacagatcaacgca
tcggctgcaaacgggctgagctcttctgtcggctggacgccgtctctgcatggatcgatt
gatgcttctgctaatgtgaaatcaaatgtcataaatcaagcgggtgcgggtaaattaaat
taa
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