Bacillus sp. YP1: QF06_04245
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Entry
QF06_04245 CDS
T03701
Name
(GenBank) ATP-dependent helicase
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bacy
Bacillus sp. YP1
Brite
KEGG Orthology (KO) [BR:
bacy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bacy03400
]
QF06_04245
Enzymes [BR:
bacy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QF06_04245
DNA repair and recombination proteins [BR:
bacy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
QF06_04245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
HTH_MCM7
Motif
Other DBs
NCBI-ProteinID:
AJO57689
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All DBs
Position
873837..877337
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AA seq
1166 aa
AA seq
DB search
MGAEFLVGRSGSGKTKLIIDSIQDELRRAPFGKPIIFLVPDQMTFLMEYELAKTPDMGGM
IRAQVFSFSRLAWRILQHTGGMSRPFLTSTGVQMLLRKLIEEHKQEFKVYQKASDKSGFT
AQVERMLTEFKRYCLEPEDIRRMAESGTASEYRGERVLSEKLHDLSILYQQMEKSLADQY
LHSEDYLTLLAEHIPLAEDIKGAHIYVDGFYQFTPQEFRVLEQLMVHAEHITFSLTADKP
SYEREPHELELFRMTGKTYYRLHQKAKELNLDITYKELSGTERHTKTPELAHLEAQYEAR
PAVPYAEKQEALTVMQAANRRAELEGIAREIHALVREKGYRYKDVAILARQPEDYKDMVK
EVFADYEIPYFIDGKASMLNHPLIEFIRSSLDVLKGNWRYEAVFRCVKTELLFPLNEPKA
KVREQVDQLENYCIAYGIKGDRWTKGDRFQYRRFVSLDDDFAQTDQEIEMENMLNDTRDW
IVPPLFQLQKRMKKAKTVQEKAEALYRYLEETDVPLKLDQERQRAEDDGRIIEAQQHQQA
WDAVIQLLEEFVEMMGDDEISLDLFQQMIEAGAESLTFSLIPPALDQVFVGNMDLSRMYG
TSCTFVLGANDGVLPARPDENGVLSDDDREWLKTIGVELSSGGRERLLDEHFLIYMAFSS
PSDRLYVSYPIADAEGKTLLPSMIVKRLEELFPYHKERLLTNEPEQVSDEEQLMYVVNQS
VAQSFTASQLRLWTREYDISDVWWSTYNVLMSEPDRLQSKKLFSSLFFRNEVKQLERSVS
RQLYGERIQGSVSRMETFNACPFSHFASHGLHLKERQFFKLEAPDIGQLFHSSLKLISDR
LREQKLDWRDLTKEQCELFSYDAVERLAPKLQKEILLSSNRHYYVKEKLQKIVTRVSGIL
SEHAKASGFVPIGLELGFGGKGPLPPLTFQLKNGCTMELVGRIDRVDKAESSKGLLLRIV
DYKSSDKGLDLAEVYYGLALQMLTYLDLSITHSADWLGMRATPAGVLYFHIHDPMIQSNL
PLGLDEIEQEIFKKFKMKGLLLGDQEVVRLMDTTLQEGRSNIINAGLKKDGSLRSDSAAV
GEKEFDLLTKHVRRTFQEAGEQITDGRVSIEPYKMKNKTPCTYCAFKSVCQFDESLEENE
YRPLKAEKDKTILEWIKKEADGNEHS
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
ttgggagcagagtttttagtaggcaggtccgggagtggaaaaacgaagctgatcatcgac
agcattcaggatgaattgcgccgggctccattcgggaagccgatcatttttctagtcccg
gatcaaatgacgtttttaatggaatacgagcttgctaaaacgccagatatgggcgggatg
atacgcgctcaagtattcagtttttcacgattggcctggcgcatcctccagcatacggga
ggaatgagcaggccgtttctgacgagcaccggcgtacaaatgctcctgcggaagctcatt
gaggagcataaacaggagttcaaagtctatcaaaaagcgagtgacaaaagcgggtttacc
gcacaggttgagcggatgctgacagagtttaagcgctattgtctggaaccggaggatatc
cgccggatggcggaaagcggaacggcttccgagtatcgcggagaacgagttttatctgaa
aagctccatgacttatcaattctgtatcagcaaatggaaaaaagcctcgcagaccaatat
cttcactctgaggattatttgacattgctggcagagcatatcccgcttgcggaagatata
aaaggcgcccatatctatgtggatggcttttatcagtttacaccgcaggaattcagggtg
ttggagcagcttatggttcatgcggagcatatcacgttttcgctcacagcggacaagccg
tcatatgagcgggagccgcatgaactggaattgttcagaatgacggggaaaacctattac
cgcctgcatcagaaggcgaaggaactgaatttggacattacgtataaagagctgagcggg
actgagcggcatacaaagacgccggaattggcgcatctagaggcacagtatgaagcgcgt
ccggccgttccatacgcagaaaaacaagaagcccttactgtgatgcaggccgcaaacaga
cgggctgagctggaaggcattgcccgggaaattcacgccctagtcagagagaagggatat
cgctataaggatgtagccattcttgcgcgccagccggaagactacaaggatatggtgaag
gaagttttcgcagattacgagattccttatttcattgacggaaaagcatctatgctgaac
catccgttaattgaatttatccggtcaagccttgatgttctgaaagggaattggcgttat
gaagcggtgtttcgctgcgtgaaaaccgaactgctattcccgctcaatgaaccgaaggcc
aaagtgagagaacaggtcgatcagctcgaaaattactgtatcgcctatggtattaaaggc
gaccgctggacaaagggcgatcggttccaatacaggcgttttgtgtcattggatgatgat
tttgcgcagacagatcaggaaatcgaaatggaaaacatgttgaatgacacccgcgattgg
attgttccgccgctttttcagcttcaaaaacgcatgaaaaaagcgaagacggttcaagag
aaggcggaggcgctctatcgttatttagaagagacggatgtgccgctgaagctggatcag
gaaaggcagcgtgctgaggatgacggcagaatcattgaagcgcagcagcatcagcaggcg
tgggacgcagtcattcagctgcttgaggagtttgttgaaatgatgggagatgatgagatt
tctcttgatttgtttcagcaaatgatagaagccggcgcggagtcgcttacattttctcta
attccgcctgcgcttgaccaggtgtttgtcggcaatatggatttgtccagaatgtatggc
acctcctgcacctttgtgctcggggcaaacgacggcgttctgccggcacgccctgatgaa
aacggagtcctgtcggatgatgaccgggaatggctgaaaacgattggggttgagctatcc
tcaggcggacgggagcgtttgcttgatgagcatttcctcatctacatggcattttcaagt
ccgtctgaccggctttacgtatcgtatccgattgctgatgcggaaggaaaaacgcttttg
ccgtcgatgatcgttaagcggctggaagaactgtttccatatcataaggagcgcctgtta
acaaatgaacctgaacaggtcagcgatgaggaacagctgatgtatgtcgtgaatcaaagc
gtggcacagtcctttaccgcgagccagctcaggttatggacacgggaatacgacatcagc
gacgtctggtggagcacgtacaatgtgctgatgagtgagccggacaggctgcagtcgaaa
aagctgttctcaagcctgtttttccggaatgaagtgaagcagcttgaacgcagcgtgtcg
agacagctctatggtgaacgcattcagggcagtgtatcgagaatggaaacctttaacgca
tgcccgttttcccattttgcgtcacacgggctgcatttgaaggaacggcaattcttcaag
cttgaagcaccggatatcggccagctgtttcattccagcttaaagctgatttctgacagg
ctgcgtgagcaaaagctggattggcgcgatttaacgaaagagcaatgcgagctgttttcc
tatgatgcggtagagcggctggcaccgaaactgcaaaaggaaattctgctcagctcaaac
cggcattattatgtgaaggaaaaactgcaaaaaattgtgacacgtgtatccggcatttta
agcgagcatgcgaaagcgagcggattcgtaccgatcgggcttgaactgggctttggagga
aaagggccgcttccgccgctgacctttcaactgaaaaacggctgtacgatggaactcgtc
gggcgaattgaccgtgttgataaggctgaaagctcaaaaggcctgctcctcaggattgtc
gattataaatcaagcgacaaaggccttgacttagcggaagtatattacggattggcactg
caaatgctgacgtaccttgatttatcgattacacattcagctgactggctcgggatgagg
gcgacgcctgccggagtgctgtatttccatattcatgacccgatgattcaatctaatctc
ccgcttgggcttgacgagattgaacaggagatctttaagaaatttaaaatgaagggcttg
ctcctcggtgatcaggaagtggttcgcctcatggatacaacccttcaagagggacggtca
aatatcataaacgccggcttgaaaaaagacggatctcttagatcagactcggcagcagtc
ggtgaaaaggaatttgatcttttgacaaagcatgtgcgccgcaccttccaggaagcgggc
gaacaaatcaccgacgggcgcgtatccattgagccgtacaaaatgaagaacaagacgccg
tgcacatactgtgcgttcaaatcagtatgccaatttgatgaatcactggaagaaaacgag
tatcgcccattaaaggctgaaaaggacaagacaatacttgagtggataaaaaaggaggcg
gatggcaatgaacattcctaa
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integrated database retrieval system
