Bacillus sp. YP1: QF06_04250
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Entry
QF06_04250 CDS
T03701
Name
(GenBank) ATP-dependent helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
bacy
Bacillus sp. YP1
Brite
KEGG Orthology (KO) [BR:
bacy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bacy03400
]
QF06_04250
Enzymes [BR:
bacy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QF06_04250
DNA repair and recombination proteins [BR:
bacy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
QF06_04250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_12
DEAD
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
AJO57690
LinkDB
All DBs
Position
877324..881022
Genome browser
AA seq
1232 aa
AA seq
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MNIPKPADSTWTDDQWNAIVSTGQDILVAAAAGSGKTAVLVERMIRKITAEENPIDVDRL
LVVTFTNASAAEMKHRIAEALEKELVQRPGSLHIRRQLSLLNRASISTLHSFCLQVLKKY
YYLIDLDPGFRIADQTEGELLGDEVLDELFEDEYAKGEKAFFELVDRYTTDRHDLDLQFL
VKQVYEYSRSHPNPEKWLESFVHLYDVSEKSAIEELPFYQYVKEDIAMVLNGAKEKLLRA
LELTKAPGGPAPRADNFLDDLAQIDELIQHQDDFSELYKRVPAVSFKRAKAVKGDEFDPA
LLDEATDLRNGAKKLLEKLKNDYFTRSPEQHLKSLAEMKPVIETLVQLVISYGKRFEAAK
QEKSIIDFSDLEHYCLAILTAENDKGESEPSEAARFYQEQFHEVLVDEYQDTNLVQESIL
QLVTSGPEETGNLFMVGDVKQSIYRFRLAEPLLFLSKYKRFTESGEGTGRKIDLNKNFRS
RADILESTNFLFKQLMGGKIGEVDYDEQAELKLGAAYPDNDETETELLLIDNAEDTDASE
EAEELETVQFEAKAIAKEIRKLISSPFKVYDGKKKTHRNIQYRDIVILLRSMPWAPQIME
ELRAQGIPVYANLTSGYFEAVEVAVALSVLKVIDNPYQDIPLASVLRSPIVGADENELSL
IRLENKKAPYYEAMKDYLAAGDRNDELYQKLNTFYGHLQKWRAFSKNHSVSELIWEVYRD
TKYMDYVGGMPGGKQRQANLRVLYDRARQYESTAFRGLFRFLRFIERMQERGDDLGTARA
LSEQEDVVRLMTIHSSKGLEFPVVFAAGLGRNFNMMDLNKSYLLDKELGFGTKYIHPQLR
ISYPTLPLIAMKKKMRRELLSEELRVLYVALTRAKEKLFLIGSCKDHQKQLAKWQASASQ
TDWLLPEFDRYQARTYLDFIGPALARHRDLEDLAGVPAHADISDHPARFAVQMIHSYDLL
DDDLEERMEEKSERLEAIRRGEPVPGSFAFDEKAREQLSWTYPHHEVTQIRTKQSVSEIK
RKREYEDEYSGRAPVKPADGSILYRRPAFMMKKGLTAAEKGTAMHTVMQHIPLSHVPSIE
EAEQTVHRLYEKELLTEEQKDAIDIEEIVQFFHTEIGGQLIGAKWKDREIPFSLALPAKE
IYPDAQEADEPLLVQGIIDCLYETEDGLYLLDYKSDRIEGKFQHGFEGAAPILKKRYETQ
IQLYTKAVEQIAKTKVKGCALYFFDGGHILTL
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgaacattcctaaaccggcagacagcacatggacagatgaccaatggaatgccattgtt
tcaaccggccaggatattcttgtggcagcggctgcgggctctggtaaaaccgctgtgctc
gttgaacgaatgattcggaaaatcaccgcggaggaaaacccaatagatgtagaccgtctt
ctcgttgtgacatttacaaacgcctcagcggcagagatgaagcaccgaatcgcagaagcc
ttggaaaaagagcttgtacagcgccccggctcgctgcatatcagacgccagctgtctctt
ttaaaccgggccagcatttcgacgcttcattccttttgcctgcaagtgctgaagaaatat
tactacttgatcgatcttgatccgggctttcggatagctgatcagacggaaggcgagctg
ctcggtgatgaagtgcttgacgagctgtttgaagacgaatatgcaaagggtgaaaaggca
ttttttgagcttgttgaccgctatacgacagaccggcacgatctggatctgcaatttctc
gttaaacaggtgtacgagtattcccgatcccatcccaaccccgagaagtggctggaaagt
tttgttcatttgtatgatgtatcagaaaagagcgccatcgaggagctgccgttttatcaa
tatgtcaaagaagatattgcaatggtgcttaacggggcgaaggaaaagctcttgcgcgcg
cttgagctgacgaaagcgccgggcggcccggcgccgcgtgctgacaattttcttgatgat
cttgcgcagattgatgaactgattcagcatcaggacgatttcagtgaactatataagcgg
gtgcccgccgtctcttttaagcgtgccaaagcagtaaaaggggatgagttcgatccagcg
ctccttgatgaggcgacagatttgagaaacggtgcgaaaaaactgcttgaaaagctcaaa
aacgactacttcacgcgaagtcctgaacagcacttgaaaagcctagccgagatgaagcct
gtcattgaaacgctcgtacagcttgtcatcagctatggaaaacgattcgaagctgcgaaa
caggaaaaatcaatcatcgatttttcggatttggagcattactgtttagcgattttgaca
gctgagaatgacaaaggtgaaagtgagccgagcgaggctgcaaggttttatcaggaacag
tttcatgaggtgctcgttgacgaatatcaggataccaacctcgtgcaggaatcgattctg
caactcgtcacaagcggtccggaggagactggtaacctgtttatggtaggagatgtcaaa
cagtcgatttatcgattcaggcttgcggagccgcttcttttcctctctaaatacaaacgg
tttacagagagcggagaaggcacggggcggaaaatcgatttaaataaaaatttccgaagc
cgggctgatattttagagagcacaaactttttatttaaacagctgatgggcggcaaaatc
ggtgaggtcgattatgacgagcaggctgagctgaagcttggtgcagcgtatccggacaat
gacgagacggaaacagagctgctgctgatcgacaacgcagaagatacggatgcaagtgag
gaagcagaagagcttgaaacggtgcagtttgaggcaaaagccatcgctaaggaaattcgc
aagctgatttcatcgccatttaaggtgtatgacggaaaaaagaaaacacatcgcaatatt
cagtaccgagatatcgtgattttgctccgttcgatgccgtgggctccgcaaatcatggag
gagctgagagcacagggcataccggtttacgccaatttaacgtcaggctatttcgaagcg
gtcgaagtcgccgtcgcgctttctgtgctgaaggtaatcgataatccgtatcaggatata
ccgcttgcctctgtgctgcgctcaccgattgtcggagcagatgaaaacgagctgtctttg
atccggcttgaaaataaaaaagcgccgtactatgaggcgatgaaagactacctggctgct
ggtgaccggaacgatgagctttatcaaaagctaaatacgttttacggacatctgcaaaaa
tggcgcgcgttttcgaaaaaccactcagtatctgagctgatttgggaagtgtaccgcgac
accaaatatatggattatgtcggcggcatgccgggcggaaaacagcgccaggccaatttg
cgtgttctttatgacagggcgcgtcaatatgaatcaacggcatttcgcggcttgttccgt
ttcctgcggtttatcgaacgcatgcaggagcggggcgatgatcttggtacggcgagagcg
ctcagcgagcaggaggatgttgtccgcttaatgacgatccacagcagcaaagggctcgaa
tttccagtcgtgtttgcagcaggtctcggccggaatttcaacatgatggatttaaataaa
tcgtacctgctggataaggagctcggatttggcacgaagtatattcatccgcaattacgc
atcagctatccgacacttccgctcattgcgatgaagaaaaaaatgcgcagggagctgctg
tcagaggaattgcgtgtgctctatgttgcattaacgagagcgaaggaaaagctgtttctg
attggctcatgtaaggatcatcagaaacagcttgcaaaatggcaggcatccgcgtcccaa
actgattggcttctgccggaatttgaccgctatcaggcgagaacgtatctagatttcatt
gggccggctcttgccaggcacagagacttggaggatttggctggtgtgccagcacacgct
gacatctcagatcacccggctcgttttgccgttcaaatgatccattcctatgatttgctt
gatgatgatctggaagaaagaatggaagaaaaaagcgagcgcctagaagcgatccgccga
ggtgaaccagttcccggctcgtttgcgtttgatgaaaaagcccgcgagcagctgagctgg
acatacccgcatcacgaggtgacgcaaattcggacaaagcaatcggtttctgagatcaaa
agaaaaagagagtacgaggatgaatacagcggcagggcccctgtaaagccggctgatgga
agcattctgtacagacgtcccgcttttatgatgaaaaaaggcctgacagcggcagagaaa
gggactgccatgcatacggttatgcagcatatcccgctgtcacatgtgccgtcgatagaa
gaagctgagcagacggttcacaggctttatgaaaaagagcttctcactgaagaacaaaaa
gacgctattgatatagaagaaatcgtgcaatttttccatacagaaatcggcggacagctg
atcggcgcaaagtggaaggacagggaaataccattcagcttagcgcttccggccaaggag
atctatcctgatgcacaggaggcagatgagccgcttttagtgcagggtatcattgactgt
ctctatgaaactgaggacggattatatctattggattataagtcggaccggattgagggc
aaattccagcatggatttgaaggagcggccccgatcttgaagaaacgatatgaaacgcaa
attcagctgtacacgaaggcagtggagcaaattgcaaaaacaaaggtaaagggatgtgcg
ctttatttctttgacggagggcacattctgacattatag
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