Bacillus sp. YP1: QF06_08725
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Entry
QF06_08725 CDS
T03701
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bacy
Bacillus sp. YP1
Pathway
bacy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bacy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QF06_08725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bacy03019
]
QF06_08725
03400 DNA repair and recombination proteins [BR:
bacy03400
]
QF06_08725
Enzymes [BR:
bacy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QF06_08725
Messenger RNA biogenesis [BR:
bacy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QF06_08725
DNA repair and recombination proteins [BR:
bacy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QF06_08725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
AJO58540
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All DBs
Position
complement(1837113..1838888)
Genome browser
AA seq
591 aa
AA seq
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MLHRAQSLLAHYFGYEKFRSGQDEAIRLVTEARQNTACIMPTGGGKSICYQIPALMFEGT
TIVISPLISLMKDQVDALEEAGINAAYINSTQSNQEIYERLNGLKEGAYKLFYITPERLT
STEFIRILQGIDVPLVAIDEAHCISQWGHDFRPSYRNIEILFRELHDKPVIMALTATATP
EVHDDICKQLHIQKENTVYTGFSRENLTFKVVKGENKDRFIDEYVQNNRHEAGIVYTATR
KEADRIYERLKRNQVRAGRYHGGLADDERKEQQERFLNDELQVMVATSAFGMGIDKSNIR
FVLHAQIPKDMESYYQEAGRAGRDGLASECVLLFSPQDIMVQRFLIEQSEHEEKQKQDLK
KLRQMVDYCHTEDCLQRFILMYFGEKEPDACGQCGNCTDTRAAHDVTREAQMVLSCIIRM
KERFGKTMVAQVLAGSKNKKVLENGFSDLSTYGILKHQSVGEISDFIEFLISDDFIRMSD
GTFPTLFVSSKGRNVLKGELSVARKESLKAAAITENDELFERLRMVRKEIAAEQGVPPFV
VFSDQTLKEMSGKQPVNDDELLSIKGVGEQKRAKYGRLFLQEIQAYARMTD
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgttacatagagcccaatcccttctggctcattattttggttatgagaagtttcggagc
ggccaagatgaagcgatccgcttggtgacggaagcgaggcaaaatacggcctgcattatg
ccgacgggaggcggcaaatcgatttgctatcaaattccggcattaatgtttgaagggacg
acgatcgtcatatcaccgttgatttccttgatgaaggatcaagttgatgcgttagaagaa
gcggggattaacgccgcctacattaacagcacacaatccaatcaggaaatatatgagagg
ctgaacggactcaaagaaggggcttataaacttttttacattacaccagagcgactaacg
tccacagagtttatccggattttgcagggcatagatgttcctttggtcgcaatagacgag
gcgcactgtatttctcaatggggccatgatttcaggccaagctacaggaatattgaaatc
ttgttccgtgaattacatgacaagcctgtcatcatggcgttaacagcaacagccacaccc
gaggttcatgatgatatttgcaaacagctgcatattcaaaaagaaaacacggtatatacc
ggattttcccgagagaatttaacctttaaagtagtaaaaggagaaaataaagatcggttt
atagacgaatatgtgcaaaacaacaggcatgaagcaggaattgtctatacagcgaccaga
aaagaagctgatcggatatatgagagattgaaacgaaatcaggtcagggcaggccggtat
catggaggtttggctgatgatgagagaaaagagcagcaggaaaggtttcttaatgatgag
cttcaagtgatggtggcaacctctgcttttggaatgggtattgataaatcaaatattaga
tttgttctgcatgcacaaattccgaaagatatggaaagctattatcaagaggcaggacga
gctggacgggacggccttgccagtgaatgtgttctcctgttttcaccgcaggatattatg
gtgcagcgcttcttaattgagcaatcagaacatgaagagaaacaaaagcaggatttaaaa
aagctgagacaaatggtcgactactgtcataccgaagattgtctgcagcgttttatcctt
atgtatttcggagaaaaggagcctgatgcgtgcggacagtgcggaaactgtaccgataca
agagcggcccatgacgtgacgcgggaggcgcaaatggtcttatcttgtatcattcgcatg
aaagaacggtttggcaagacgatggttgcccaggtacttgccggctccaaaaataaaaaa
gttcttgaaaacggcttttcagacctttcaacatacgggatattaaaacaccaatccgtt
ggcgaaatcagcgattttatcgaatttcttatttctgacgacttcatcaggatgtcagac
ggaacgtttccgactctttttgtcagcagtaaaggaaggaatgtgctgaaaggagaatta
tcagtagcgagaaaagaatcgttaaaagcggcagcgattactgaaaatgacgagctattt
gaacgattgcgcatggttcggaaagaaattgcggctgagcagggtgttccgccatttgtt
gttttctctgaccaaacgttaaaagaaatgtcaggaaaacagcccgtaaatgatgatgaa
cttttgtctataaaaggagtcggagaacaaaaaagagcaaaatacggccggcttttttta
caagaaatacaagcttatgcaaggatgacagactaa
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