Bacillus sp. YP1: QF06_09705
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Entry
QF06_09705 CDS
T03701
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bacy
Bacillus sp. YP1
Pathway
bacy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bacy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QF06_09705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bacy03019
]
QF06_09705
03400 DNA repair and recombination proteins [BR:
bacy03400
]
QF06_09705
Enzymes [BR:
bacy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QF06_09705
Messenger RNA biogenesis [BR:
bacy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QF06_09705
DNA repair and recombination proteins [BR:
bacy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QF06_09705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
SNF2-rel_dom
DUF6119
Motif
Other DBs
NCBI-ProteinID:
AJO58727
LinkDB
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Position
complement(2014892..2016382)
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AA seq
496 aa
AA seq
DB search
MTKLQQTLYQFFGFTSFKKGQQDIIESILSGKDTIAMLPTGGGKSLCYQLPGYMLDGMVL
IVSPLLSLMEDQVQQLKARGEKRAAALNSMLNRQERQFVLEHIHRYKFLYLSPEALQSPY
VLEKLKSVPISLFVIDEAHCISEWGHDFRPDYSKLGQLRKKLGHPPVLALTATATKETLQ
DVMNLLELQHAVRHLNSVNRPNIALRVENAADTAEKIDRVIQLVENLQGPGIVYCPTRKW
AEELAGEIKSKTSSRADFYHGGLESGDRILIQQQFIHNQLDVICCTNAFGMGVDKPDIRY
VIHFHLPQTAEAFMQEIGRAGRDGKPSVSILLRAPGDFELQEQIIQMESVTAEEIADVIR
VLEKTEERDERRLRDVLLQYGVGETQARMMIHLFMQGKTSVELMKKEISYRMELKLEKMH
RVSFLLQRDGCLRQALLTYFDESYEPDDGNLPCCSHCGFDLSLYEQKGERSKMAPLDSWS
SELHRIFSLQTVGELN
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgactaaattacagcaaacgttatatcagttttttggttttacttcctttaaaaaaggg
cagcaggacattattgaaagcatactcagcgggaaggataccattgcaatgctcccgact
gggggagggaaatcgctttgctaccagctgcctggttatatgcttgacggcatggtatta
atcgtttctccactgctttctttaatggaggatcaggtgcagcagctgaaagcccggggg
gaaaagcgtgctgcagctttgaacagcatgcttaacaggcaggaaagacaatttgtttta
gaacatattcatcgatataaatttttgtacttgtctcctgaagctttacagtctccatat
gtattggaaaaattgaaaagcgtcccgatcagcctatttgttattgacgaagcgcattgt
atttctgaatggggacacgacttcaggcctgattattcaaagctcggacagctgagaaaa
aaacttggtcacccgcccgttctggcattgaccgccacggctacaaaggaaacgctgcaa
gatgtcatgaacctgctagagctgcagcatgctgtacgccatctcaactcagtcaaccgc
ccaaacatcgcactgagggttgaaaatgcggcggatactgccgaaaaaatagatagggtc
attcagctggttgaaaacctgcaaggcccgggaattgtttattgtccgacacggaaatgg
gctgaggaattagcgggtgagattaaaagcaaaacgagcagcagagccgacttttaccat
ggcggtttggagtcaggggacaggattttaattcagcagcagtttattcataaccagctt
gatgtgatatgttgtacgaatgcgtttggaatgggtgtcgataaacctgatatcagatat
gtgattcattttcacctcccgcagacggcagaagcttttatgcaggaaatcggcagagcg
ggacgcgacggaaagccgagtgtcagcattttgctgcgggcgccaggggattttgaattg
caggaacaaattatccagatggagagtgtcacagctgaagaaatcgccgacgtaatccgt
gtgctagagaagacggaggagcgggatgagagaaggctgcgtgacgtattacttcagtat
ggcgtcggagagacacaggcccgtatgatgattcatctctttatgcagggaaaaacatca
gttgaactgatgaagaaagaaatttcatatcgcatggagctgaagctggaaaaaatgcac
cgtgtatcatttttgcttcagcgtgacggctgtttaaggcaggcactgttaacctacttt
gatgaatcatacgagcccgatgacggaaacctcccgtgctgttcacattgcggttttgat
ttatccttgtatgaacaaaaaggggaacggagtaaaatggcgccattagacagctggagt
tcggaattgcaccggatattcagcttgcagactgtaggtgagctgaactga
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