Bacillus sp. YP1: QF06_19615
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Entry
QF06_19615 CDS
T03701
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bacy
Bacillus sp. YP1
Pathway
bacy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bacy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QF06_19615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bacy03021
]
QF06_19615
03400 DNA repair and recombination proteins [BR:
bacy03400
]
QF06_19615
Enzymes [BR:
bacy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QF06_19615
Transcription machinery [BR:
bacy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QF06_19615
DNA repair and recombination proteins [BR:
bacy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QF06_19615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
Peptidase_M23
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AJO60564
LinkDB
All DBs
Position
3974009..3977608
Genome browser
AA seq
1199 aa
AA seq
DB search
MLDVNNFEYMNIGLASPDKIRSWSFGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTDPANTPLEKKQLLSEKEYRAYLDKYGNKFQASMGAEAIHKLLQ
DIDLVKEVDMLKEELKTSQGQRRTRAIKRLEVLEAFRNSGNKPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPHLKMYQCGLPKE
MALELFKPFVMKELVEKGLAHNIKSAKRKIERVQPEVWDVLESVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARILMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLERAGAVGEGMVFKNTDEALLAYQNGYVHLHTRVAVA
ANSLKNVTFTEEQRSKLLITTVGKLVFNEILPESFPYMNEPTKSNIEEKTPDRFFLEKGA
DVKAVIAQQPINAPFKKGILGKIIAEIFKRFHITETSKMLDRMKNLGFKYSTKAGITVGV
SDIVVLDDKQEILEEAQSKVDNVMKQFRRGLITEEERYERVISIWSAAKDVIQGKLMKSL
DELNPIYMMSDSGARGNASNFTQLAGMRGLMANPAGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIIRETDCGTDRGILAKPLKEGTETIERLE
ERLIGRFARKQVKHPETGEVLVNENELIDEDKALEIVEAGIEEVWIRSAFTCNTPHGVCK
RCYGRNLATGSDVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQELF
EARNPKGQATITEIDGTVVEINEVRDKQQEIVVQGAVETRSYTAPYNSRLKVAEGDKITR
GQVLTEGSIDPKELLKVTDLTTVQEYLLHEVQKVYRMQGVEIGDKHVEVMVRQMLRKVRV
IDAGDTDVLPGTLLDIHQFTEANKKVLLEGNRPATGRPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMMKYRKVKPVSNVQPTDDMVPVE
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
ttgctagatgtgaacaattttgagtatatgaacatcggtcttgcttcaccagataaaatc
cgttcatggtcttttggtgaagtgaaaaagcctgaaacgataaactatcgtacgttaaaa
cctgaaaaggacggtctattctgcgaacgcattttcggacctactaaggactgggaatgt
cattgcgggaagtacaagcgagttcgttataaaggcgtagtttgtgaccgctgcggagtc
gaagtaacacgggctaaagtccgtcgtgagagaatggggcacattgaactggctgcccca
gtttcccacatttggtatttcaaaggtattccaagccgtatgggtcttgtgctggatatg
tcacctcgtgctttagaagaagtcatttactttgcttcttacgttgtaactgatccggcg
aatacaccgcttgaaaagaaacagcttctgtctgagaaagaataccgtgcttatcttgat
aaatacggtaataaattccaagcatctatgggtgctgaagcaattcataaacttcttcaa
gatatcgatcttgtaaaagaagttgatatgttaaaagaagagctgaaaacttcacaagga
caacgccgtactcgtgcgatcaaacgtcttgaagttttagaagccttccgtaactcagga
aacaagccttcttggatgatccttgatgtgcttcctgttattcctccggagcttagaccg
atggttcagctagatggcggacgttttgcgacttctgatttgaatgacctttatcgtcgt
gtcatcaaccgtaacaatcgtttgaaacgccttttggaccttggtgcgcctagcatcatc
gttcaaaacgaaaagcgtatgcttcaagaggctgtcgatgccctaattgacaacggccgc
cgcggacgccctgtaacaggtcctggaaacagaccgttaaaatctctttctcacatgctg
aaagggaagcaaggccgtttccgtcaaaaccttcttggtaaacgtgtcgattactccgga
cgttctgtaatcgttgttggtcctcatttgaaaatgtaccaatgcggattaccgaaggaa
atggcacttgaacttttcaaacctttcgttatgaaagaacttgttgaaaaaggtcttgct
cacaacattaagagtgcgaaacgcaaaattgagcgcgtacagcctgaagtttgggatgta
ctagaatcagttattaaggagcatccggtactgctgaaccgtgcccctacacttcacaga
ttaggtatccaggcgtttgaaccaacgcttgttgaaggacgcgcaatccgtcttcacccg
ctcgtatgtacagcttacaacgctgactttgacggtgaccaaatggcggttcacgtacca
ttatctgctgaagcacaagctgaagcacgcatcttgatgcttgctgctcaaaacatcttg
aaccctaaagatggtaaaccggttgtaacaccgtctcaggatatggtactaggtaactat
tacctgacacttgagcgtgccggtgctgtcggtgaaggtatggtcttcaagaatacagac
gaagcgcttcttgcttatcaaaacggatatgttcaccttcatacgagagtagctgttgca
gctaactcacttaagaatgtgacatttaccgaagaacagcgctcaaaattgttaattaca
actgtcggtaagcttgtcttcaatgaaattcttccggaatcattcccttacatgaatgaa
ccaacgaagagcaacattgaagagaaaacacctgaccgtttcttcttagaaaaaggtgct
gatgttaaagctgttatcgcacagcagccaatcaatgcgccgtttaaaaaaggcattctg
ggtaaaatcatcgcggaaatctttaaacgattccatattacggaaacgtctaaaatgctt
gaccgcatgaaaaacctaggtttcaaatattcaactaaagctggtattacagttggggtt
tctgacatcgtcgtactcgatgataaacaagaaattcttgaggaagcgcaaagcaaagtt
gacaacgttatgaagcaattccgccgcggtcttatcactgaagaagaacgctatgagaga
gtcatctctatctggagtgctgcaaaagacgttatccaaggcaaactgatgaaatcactt
gatgaactcaacccgatctacatgatgagtgactctggtgcccgtggtaacgcatctaac
tttacgcagcttgccggaatgcgcggcctgatggccaacccggctggacgtatcattgag
ttgccgatcaaatcaagtttccgtgaaggtctgacagtattggagtactttatctccaca
cacggtgcgcgtaaaggtcttgccgataccgctcttaaaactgctgactcaggttacctt
acacgccgtctcgttgacgttgctcaggatgttatcatccgtgaaactgattgcggaact
gaccgaggcattcttgctaagcctcttaaagaaggaactgaaacaattgagcgcttagaa
gaacgcttaatcggacgttttgcaagaaaacaagtgaagcaccctgaaacaggtgaagtg
cttgtgaatgaaaacgaactgatcgatgaagataaagcactggagattgtcgaagccggc
attgaagaagtgtggatccgttctgccttcacatgtaatacgcctcatggtgtatgtaaa
cgatgctatggccgaaatcttgcaactggctccgatgttgaagtcggtgaagctgtcgga
atcattgctgcccaatcaatcggtgagcctggtacacagttaacaatgcgtacattccat
acaggcggggttgccggagacgatatcacacagggtcttccgcgtatccaagagcttttc
gaagcgcgtaatccgaaaggtcaggcaacaattacagaaatcgacggtacagtcgttgag
atcaatgaagttcgtgataagcaacaggaaattgtggttcaaggcgcagtggaaacacgt
tcttatacggcaccttacaactcccgcctgaaagtagcggaaggagataaaattactcga
ggccaagtactgacagaaggttcaatcgatccgaaagaacttcttaaagtgactgacctg
acgactgttcaagagtatcttctccatgaggttcaaaaggtttaccgtatgcagggtgtt
gaaatcggtgataaacacgtagaagtaatggttcgccagatgcttcgcaaagtacgcgtg
attgatgccggtgacactgatgtgcttccaggtacattgcttgatattcaccaatttact
gaagcgaacaaaaaggtattgcttgaaggcaaccgaccagctacaggccgtcctgtctta
ctcggtattacaaaagcatctcttgaaactgattcattcttatctgctgcttccttccag
gaaacaacacgtgtccttacagatgcagcgatcaaaggtaagcgtgacgagcttctcggc
ttgaaagagaatgttatcatcggtaagcttgttccagcaggtacaggaatgatgaaatac
cgtaaagtaaaaccagtatcaaatgttcagccgactgacgatatggtcccggttgaataa
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integrated database retrieval system
