Bacterioplanoides sp. SCSIO 12839: KFF03_00555
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Entry
KFF03_00555 CDS
T08310
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
bacz
Bacterioplanoides sp. SCSIO 12839
Brite
KEGG Orthology (KO) [BR:
bacz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bacz03021
]
KFF03_00555 (rpoH)
Transcription machinery [BR:
bacz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KFF03_00555 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
UTW48434
UniProt:
A0A9J7AHQ9
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Position
117401..118273
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AA seq
290 aa
AA seq
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MNQGLLAVNALSPGANLEAYITTVNAIPVLSVDEEKALAERLHYEGDLEAARQLVMSHMR
FVVHIARSYSGYGLNQGDLIQEGNVGLMKAVKRFNPEVGVRLVSFAVHWIKAEMHEFILR
NWRIVKVATTKAQRKLFFNLRSKKQRLGWLSQDEAKSIADDLGVETKTVFEMEGRLNAHD
AAFDGGVDDDSDEAAPQAPVYYLEDHSADPATVVENDNYEQDAHGRLAQAMSELDERSRN
ILQQRWLAEEKSTLHDLAAVYQVSAERIRQLEKNAMKKLKNAMGTDLVLA
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaaggtttattagccgttaatgctttgtcaccaggtgccaacctggaggcctac
atcacgacggttaatgcaattccggtattgtcggttgacgaagaaaaagcgttagctgag
cgtcttcattacgaaggtgatctggaagcagcccgtcaattggttatgtcgcatatgcgc
ttcgttgtgcatattgctcgcagctattccggttacggtctgaatcagggcgatctgatt
caggaaggtaacgtgggtctgatgaaggccgtaaaacgctttaacccggaagtgggtgtg
cgtctggtgtcgtttgccgtgcactggatcaaagcggaaatgcacgaattcattctgcgc
aactggcgtatcgtgaaggtcgctaccaccaaagcacagcgtaagctgttctttaatctg
cgctcgaagaagcaacgtctgggctggttaagccaggacgaagccaagtccattgccgat
gatctgggcgtggaaaccaaaacggtattcgagatggaaggccgtctgaatgcgcacgat
gcagcctttgatggcggtgttgatgatgacagtgatgaagccgcgcctcaggcgccggtg
tattacctggaagatcacagcgctgacccggccaccgtggttgaaaacgacaactacgag
caagatgctcacggccgtttagctcaggcgatgagtgaactggatgagcgcagccgtaat
attctgcaacaacgctggttggccgaagaaaagtcgacgctgcatgatctggctgcggta
tatcaggtatcggctgaacgtattcgtcagctggaaaagaatgcgatgaaaaagctgaaa
aatgccatgggaaccgatctggttctggcctga
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