Bacterioplanoides sp. SCSIO 12839: KFF03_00980
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Entry
KFF03_00980 CDS
T08310
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bacz
Bacterioplanoides sp. SCSIO 12839
Pathway
bacz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bacz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KFF03_00980 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bacz03021
]
KFF03_00980 (rpoA)
03400 DNA repair and recombination proteins [BR:
bacz03400
]
KFF03_00980 (rpoA)
Enzymes [BR:
bacz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KFF03_00980 (rpoA)
Transcription machinery [BR:
bacz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KFF03_00980 (rpoA)
DNA repair and recombination proteins [BR:
bacz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KFF03_00980 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
DUF7026
Motif
Other DBs
NCBI-ProteinID:
UTW48511
UniProt:
A0A9J7AGX2
LinkDB
All DBs
Position
196830..197831
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AA seq
333 aa
AA seq
DB search
MQRAVNEFLTPRHIQVDEVNTTHAKVTLEPLERGFGHTLGSALRRILLSSMPGAAIVECE
IDGVLHEYSAIEGVQEDVIEVLLNLKGVAVKLHERDEATLSLSKMGPGAVTAADIQLDHG
VEIANPDHVIAHLGEGTELKMTLKVASGRGYETVEARNQNDEETKAIGKLQLDATFSPVK
RVSYSVDSARVEQRTDLDKLVIDLETNGTIDPEEAIRRSATILQQQLAIFVNLENEEVVE
QQREEEEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMHLENWPPASLRNDDKVLA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgtgcagttaatgagtttttaactcctcgtcatatccaagttgacgaagtaaac
actacccatgccaaggttactctggagccactggaacgtggtttcggtcatactttgggc
agcgcattacgtcgtatcctgttgtcgtccatgccgggcgcagcaatcgttgaatgcgaa
atcgatggcgtactgcatgagtacagcgcaattgaaggtgttcaggaagacgtaattgaa
gtcttactgaacctgaaaggcgttgcagtcaaattgcacgaacgcgacgaagcgactctg
agcttaagcaaaatgggtcctggcgcagtcactgctgccgatattcaactggatcacggt
gttgaaattgcaaacccagatcatgttatcgctcatctgggcgaaggcactgaactgaaa
atgaccctgaaggtagcttctggtcgtggttacgaaactgttgaagctcgtaatcaaaac
gatgaagaaaccaaggcgattggtaaactgcaattagacgcaacgttcagcccggttaag
cgtgtttcttacagcgtagactctgcgcgtgtagaacagcgtactgacctggataagttg
gttatcgatttagaaaccaacggaactattgatccggaagaagcgatccgtcgttctgcg
accatcttgcaacagcaattagccatcttcgtgaacctggaaaacgaagaagttgttgaa
cagcaacgcgaagaagaagagattgacccgatcctgctgcgtccagtagatgatctggag
ttaactgttcgttcggctaactgtctgaaagcagaaaacatttactacatcggtgatctg
atccagcgtactgaagtagagctgttgaagactccaaacttaggtaagaagtctctgact
gaaatcaaagacgttctggcttcccgtggtctgtcgttgggtatgcacttagagaactgg
ccgccagcttctctgcgtaacgacgataaggttttagcgtaa
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