Bacterioplanoides sp. SCSIO 12839: KFF03_02485
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Entry
KFF03_02485 CDS
T08310
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
bacz
Bacterioplanoides sp. SCSIO 12839
Pathway
bacz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bacz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KFF03_02485 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bacz03019
]
KFF03_02485 (pcnB)
Enzymes [BR:
bacz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
KFF03_02485 (pcnB)
Messenger RNA biogenesis [BR:
bacz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KFF03_02485 (pcnB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
UTW50011
UniProt:
A0A9J7ALA9
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All DBs
Position
complement(515408..516775)
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AA seq
455 aa
AA seq
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MLGSNKKRSANEADLLTVIPRDEHSISRSNISENALKVLYRLHKAGYQALLVGGGVRDNL
LDLHPKDFDVATNATPEQVNKLFRNSRLIGRRFKLVHVVFGRDVIEVATFRAPPKEEHSN
KVAATGDQGMILRDNVYGSKDEDAMRRDFTINALYYDIADFSVHAYAGGWQDMQQRQVRL
IGDPETRYREDPVRMLRAIRFAVKLDFSIEVQTAAPIRDMAPLLMQIPAARMFEEVLKLF
LHGRALDTFRMLREYNLFEPLFPATEQCLRDDPFALEMIENTMRNTDTRIRSGKSVTPYF
FFASLLWPGMRRVQQEFEDQGLPPHPALQQAADRVIRQQVQCTAIPKRFSIPMREIWEMQ
LRLPKTHSKRVHELAQHPRFRAAYDFVLLREQSGEDLKGLGDWWTQYQEKHPIPQKTHHR
GPHSRGSGNEQDHEQQGEQRRRRPRRKPRSQRPQS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
ctgttgggaagtaataaaaaacgctccgccaacgaggctgatctgttaactgtgattccc
cgtgacgaacattccatcagtcgcagcaatatcagcgagaatgccctgaaggtgctgtat
cgcctgcataaagctggttatcaggcactgctggttggcggtggtgtacgcgataatttg
ctggatctgcaccccaaagacttcgatgtagccaccaatgctacgccggagcaggtgaat
aaactgtttcgcaactcgcgcctgatcggccgccgttttaagctggtgcatgtggtgttt
ggccgcgatgtgattgaggtcgcgaccttccgtgctccgcccaaagaagaacattccaac
aaagtagcggctaccggcgatcagggcatgatcctgcgcgataatgtgtatggcagcaaa
gacgaagacgccatgcgccgcgacttcaccattaacgcgctgtattacgatattgccgat
tttagtgtgcatgcctatgccggtggttggcaggacatgcagcaacgccaggttcgctta
attggcgatccggaaacccgttaccgtgaagatccggtacgtatgctgcgggccattcgt
tttgcggtaaaactcgacttctccatcgaggtacaaacagcggcgccaattcgtgatatg
gcccccttgctgatgcagattccggcggctcgtatgtttgaagaagtgctgaagctattc
ctgcatggccgggcgctggatacctttcgcatgttacgcgagtacaatctttttgaaccg
ctgtttccagcaacagaacagtgcctgcgcgatgatccattcgccctggaaatgatcgaa
aacaccatgcgtaacaccgatacacgcattcgttcgggtaagtcggtaacaccgtatttc
ttctttgcttcgttgttgtggccgggaatgcgccgggtgcaacaggagtttgaagaccag
ggactaccaccacacccagcgctccagcaagccgctgatcgagtgattcgccagcaggtg
cagtgcaccgccattccaaagcgtttttccattccgatgcgggaaatctgggaaatgcag
ctacgcctgcccaaaacccactctaagcgggtacacgagctggcacagcacccccgtttc
cgtgccgcttacgattttgtgctgctgcgtgaacagtctggtgaagacctgaaagggtta
ggcgattggtggactcagtatcaggaaaaacacccgattccgcagaaaacacatcaccgt
ggcccacacagtcgtggctcaggcaatgagcaggatcatgaacaacagggtgaacagcgc
cgccgtcgcccgcgtcgaaaaccacgttctcagcgtccgcaatcctga
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