Bacterioplanoides sp. SCSIO 12839: KFF03_03095
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Entry
KFF03_03095 CDS
T08310
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bacz
Bacterioplanoides sp. SCSIO 12839
Pathway
bacz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bacz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KFF03_03095 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bacz03019
]
KFF03_03095 (pnp)
03016 Transfer RNA biogenesis [BR:
bacz03016
]
KFF03_03095 (pnp)
Enzymes [BR:
bacz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KFF03_03095 (pnp)
Messenger RNA biogenesis [BR:
bacz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KFF03_03095 (pnp)
Transfer RNA biogenesis [BR:
bacz03016
]
Prokaryotic type
tRNA degradation factors
KFF03_03095 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_RRP5
KH_2
KH-I_KHDC4-BBP
S1_2
Phi29_Phage_SSB
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
UTW48910
LinkDB
All DBs
Position
650136..652238
Genome browser
AA seq
700 aa
AA seq
DB search
MSTKPVALTKTFEFGGETVTLETGRIARQADGAVLATIGKTQVLATVVAAKSTKPGQDFF
PLSVHYQEKMYAAGRIPGGYLKREGRPSEKETLTSRLIDRPIRPLFPNGFMNEVQVIQTV
VAAEKDVDPDICAMIATSAALSISGIPFNGPIGAARVAFTDDNGYTLNPTYSQLEDSLLD
MVVAGTKDAVLMVESEADELTEDEMLGAVLFAHKGFQSAITAISEWAEELKVEQWDWQAE
ARDEELYNAVKAEAAAGISEAYTISDKLARYGRIDEVKAAAVEKLAAAEGEEGYSADDIA
GMVGELKYEVVRQRVIDGQPRIDGRDNETVRPLTIETGCLNTAHGSAIFTRGETQAIVAT
TLGSARDAQMVDFLHGMTTDPFLFHYNFPPYSVGEAGRMGGVGRREIGHGRLARRGVQAM
MPDQEEFPYTIRVVSEITESNGSSSMASVCGASLSLMDAGVPLKAPVAGIAMGLVKEGEK
FAVLTDILGDEDHLGDMDFKVAGTDEGITALQMDIKIEGITEEIMEIALTQAKKARFTIL
EQMNAVISEPRTELSENAPTMTSMKIDSDKIRDVIGKGGATIRDITEKTGASVDIDDNGN
IKIFAADKAGADAAQKMIEEITAEIEVGVTYEGKVSKIVDFGAFITVLPGKDGLLHISQI
SEERVENVADHLTEGQMVKVHVMDVDPKGRVKLTMKGVEQ
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgagcactaaaccagttgctttaaccaaaaccttcgaattcggcggcgaaaccgtcacg
ttagaaaccggccgtatcgctcgtcaggctgacggcgctgtactggctactatcggtaaa
actcaggtgctggctactgttgtagcggctaaaagcactaagccgggtcaggacttcttc
ccgctgtctgttcactatcaggaaaaaatgtacgccgctggccgtatccctggtggttac
ctgaagcgtgaaggtcgtccttctgaaaaagaaactctgacttctcgtctgatcgaccgt
ccgattcgtccgctgttcccgaacggcttcatgaacgaagttcaggttatccagactgtt
gttgcagcagaaaaagacgttgatccggacatctgtgccatgatcgcaacgtctgcggca
ttgagcatttctggtattccgtttaacggtcctatcggtgcagcacgtgttgctttcact
gatgacaacggctacaccctgaacccaacttacagccagctggaagattctctgctggac
atggttgtagcaggtaccaaagacgcagttctgatggttgaatctgaagctgacgaactg
accgaagacgaaatgttgggtgcggtactgttcgcacacaaaggtttccagtctgcgatc
acagcgatcagcgaatgggctgaagagctgaaagttgaacagtgggattggcaggctgaa
gcgcgtgacgaagagctgtacaacgccgttaaagcagaagcggctgctggcatcagcgaa
gcgtacaccatctctgataagctggctcgttacggtcgtatcgacgaagttaaagccgca
gccgttgaaaaactggccgcagcagaaggcgaagaaggctacagcgccgacgatatcgcc
ggcatggttggcgaactgaagtacgaagtggtacgtcagcgtgttatcgacggtcagcct
cgtatcgacggtcgtgacaacgaaaccgtacgtcctctgaccattgaaaccggttgtctg
aataccgctcatggttctgcaatcttcacccgtggtgaaactcaggcgatcgttgcaacg
actctgggtagcgcacgtgacgcacagatggttgatttcctgcacggtatgaccactgat
ccattcctgttccactacaacttccctccatactctgttggtgaagctggccgtatgggc
ggtgttggccgtcgtgaaattggtcacggtcgtctggctcgtcgtggtgttcaggcgatg
atgccggatcaggaagagttcccatacaccatccgtgtggtatctgagatcacagaatcg
aatggttcttcttctatggcttccgtatgtggcgcgtctctgtctctgatggatgcgggt
gttccactgaaagcgccagtggctggtatcgctatgggtctggttaaagaaggcgagaaa
ttcgcggttctgaccgacatcctgggcgacgaagatcacctgggcgacatggactttaaa
gtagccggtactgacgaaggtatcactgcactgcagatggatatcaagatcgaaggtatc
accgaagagatcatggaaatcgctctgactcaggctaaaaaagctcgtttcactatcctt
gaacaaatgaacgcggttatctctgagccacgtactgagctgtctgaaaacgcgccaacc
atgaccagcatgaagatcgattctgacaagattcgtgacgtaatcggtaaaggtggtgca
accatccgtgatatcaccgagaagacgggtgcttctgttgatatcgacgacaacggcaac
atcaagatcttcgcagctgataaagccggtgctgatgcagcacagaagatgatcgaagag
atcactgctgaaatcgaagtaggtgttacttacgaaggtaaagtcagcaagatcgtagac
ttcggtgctttcatcaccgtactgccaggcaaagatggcctgctgcacatctctcagatc
agcgaagagcgtgttgaaaacgtagctgaccacctgactgaaggccagatggttaaagtt
cacgtgatggacgttgatccgaaaggtcgtgttaagctgactatgaaaggcgttgaacag
taa
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