Bacterioplanoides sp. SCSIO 12839: KFF03_05585
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Entry
KFF03_05585 CDS
T08310
Symbol
ruvA
Name
(GenBank) Holliday junction branch migration protein RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
bacz
Bacterioplanoides sp. SCSIO 12839
Pathway
bacz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bacz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KFF03_05585 (ruvA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bacz03400
]
KFF03_05585 (ruvA)
DNA repair and recombination proteins [BR:
bacz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KFF03_05585 (ruvA)
RecFOR pathway proteins
KFF03_05585 (ruvA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
RecR_HhH
HHH_3
IMS_HHH
Transposase_20
HHH_8
Cdd1
Rpn9_C
PG_binding_2
Motif
Other DBs
NCBI-ProteinID:
UTW49375
LinkDB
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Position
1207375..1207983
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AA seq
202 aa
AA seq
DB search
MIGRLQGIILEKQAPDLLIDVNGVGYEVQAPLSTFVSLGKPGDVAVIYTHLAIREDAHQL
YGFSDKGQRTLFRTLIKVSGVGPKLALAILSGMDVNSFASCVHAEDVTALTKLPGVGKKT
AERLIVEMRDRLKEWQAPAPLWAAVDEAEKASRDQVLAEAESALVALGYKPTDAAKMLNK
VAADDLSAEELIRLALKSTLGR
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgattggtcgtctgcaaggcatcatcctcgaaaaacaagctcctgatttattaattgat
gtgaacggtgtgggctatgaagtccaggcgccgttatcgacgtttgtcagcttaggcaaa
cccggtgatgtggcggtgatttatacccatctggcgatccgtgaagatgcccatcagtta
tatggtttcagtgataaaggtcagcgaaccttgtttcgcacgctgattaaagtcagtggt
gttggtcctaagctggcgctggcgattttatccggcatggacgtcaattcttttgccagt
tgtgtgcatgctgaagacgtaacggcgttaaccaaactgcctggtgttggcaaaaaaact
gccgaacgcttaattgtagaaatgcgtgatcgcctgaaagaatggcaggcaccggctccg
ctatgggccgcagtcgatgaagctgaaaaagcctcgcgtgaccaggtactggctgaggca
gaaagcgcgctggtggccttgggttataaaccgactgacgccgccaagatgctgaataaa
gtcgctgcggatgatttatcggccgaagagctgattcgtttggcgttaaaaagcacgctg
ggtcgataa
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