Bacterioplanoides sp. SCSIO 12839: KFF03_07615
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Entry
KFF03_07615 CDS
T08310
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
bacz
Bacterioplanoides sp. SCSIO 12839
Brite
KEGG Orthology (KO) [BR:
bacz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bacz03016
]
KFF03_07615 (rnd)
Enzymes [BR:
bacz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
KFF03_07615 (rnd)
Transfer RNA biogenesis [BR:
bacz03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
KFF03_07615 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
DNA_pol_A_exoN
Motif
Other DBs
NCBI-ProteinID:
UTW49740
UniProt:
A0A9J7AII2
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All DBs
Position
1648463..1649620
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AA seq
385 aa
AA seq
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MPIASFKPEAFESQWIDSNSALADVCQQWLSEPYLAVDTEFVRTTTFYPKAGLIQVTSSQ
GDFLIDPLAISDWQPLKDVFLHPLVVKVFHACAEDLEVCQRLVGCVPEPLADSQHAAALV
GKGASMGFQRLVADVLNIDLPKGETRSNWLERPLRPEQIQYAVADVHYLYRIYPKLVQQL
KTLGRESWLAEDCQRMVDQANTPESLSGYFRRVKLAWKLRSQELFVLQQLAAWREQQARE
RDVPRNKVIDDASMWNIARFKVKNRDQLIRSGMKPASVKADGGDILKLVSQALELDKSHW
PKQLDRPLGPEAGQWLKELKVVINGQAETLELPAEILVRKKPLEALLRSAFPHGNGELPE
LLCGWRQEIIGERLLQKLQQLAAAD
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgccgatagcttcctttaagccagaggcttttgaatcacaatggattgatagcaattcc
gccctggctgatgtctgccagcagtggctgagtgagccgtatctggcggtggatactgag
tttgtgcgtaccaccaccttttatccgaaagcgggtttgattcaggtaaccagtagtcag
ggtgatttcctgattgatccgctggcgatcagcgattggcagccgcttaaggatgttttt
ctgcatccgctggtggtgaaggtctttcatgcctgtgcagaagatctggaagtctgccag
cgcctggtaggctgtgtgcctgagcctttggcggattcacagcacgcggcggcgttagtg
ggaaaaggggcatcgatgggctttcagcgcctggtggccgatgtgctgaatattgatctg
ccgaagggcgagacacgttccaactggctggagcgaccattgcgtcctgagcagatacaa
tatgccgtggcggatgtgcattacctgtatcgcatttacccgaagttggtgcagcagtta
aaaacacttgggcgtgagtcctggctggcggaagattgtcagcggatggtagatcaggcg
aacacaccagagagcttgtctggctattttcgtcgggtaaaactggcctggaagctgcgt
tctcaggagttgtttgtattgcagcaactggcagcctggcgtgagcagcaagcgcgtgag
cgcgatgtgccacgtaataaagtgattgatgatgcgtcgatgtggaacatcgctcgcttt
aaagtaaaaaatcgcgatcagctgattcgttcgggcatgaagcccgccagtgtgaaagcc
gatggtggcgatattcttaagctggtatctcaggcgctggaactggataaaagccactgg
cccaagcagcttgatcgaccgttaggccctgaggccggacaatggctaaaagagctgaaa
gtcgtgattaatgggcaggcggaaaccctggagcttccggctgaaattctggtgcgcaaa
aaaccactggaagcgttattgcgctccgctttcccacacggcaatggcgagctgccagag
ttattgtgtggctggcgacaagaaataataggcgagcgcctgttacaaaaactacagcag
ctggctgcggctgactga
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