Bacterioplanoides sp. SCSIO 12839: KFF03_08895
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Entry
KFF03_08895 CDS
T08310
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bacz
Bacterioplanoides sp. SCSIO 12839
Pathway
bacz03030
DNA replication
bacz03430
Mismatch repair
bacz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bacz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KFF03_08895 (dnaQ)
03430 Mismatch repair
KFF03_08895 (dnaQ)
03440 Homologous recombination
KFF03_08895 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bacz03032
]
KFF03_08895 (dnaQ)
03400 DNA repair and recombination proteins [BR:
bacz03400
]
KFF03_08895 (dnaQ)
Enzymes [BR:
bacz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KFF03_08895 (dnaQ)
DNA replication proteins [BR:
bacz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KFF03_08895 (dnaQ)
DNA repair and recombination proteins [BR:
bacz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KFF03_08895 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
UTW49979
LinkDB
All DBs
Position
1932691..1933389
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AA seq
232 aa
AA seq
DB search
MRQVVLDTETTGIGEGHRIIEIGCVEVIERKLTGRHYHKYINPQRDIDAEAQEVHGISNE
WLIETGAPVFSQVADEFREFIAGAELVIHNAAFDIGMMDAEFNRLNMTNTREFCGVLDTL
LLAREMFPGSRVSLDALCKRYDIDNSHRELHGALLDAEILADVYLMMTGGQTDLALAMEE
GQQNGVVDIALDDSLLNVELPIVRASATEVEAHEQFMDLVDKKSEGAIWRRP
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgagacaggttgtactggatactgagaccacgggtattggtgaaggtcacagaatcatt
gaaattggttgtgtcgaggtaattgaacgaaaactgaccggtcggcattatcataagtac
atcaatcctcagcgtgatattgatgccgaagcccaggaagtgcacggtatttctaatgag
tggctgatcgaaaccggagcgcctgtcttttctcaggtggctgatgagtttcgtgagttt
atcgccggcgccgagctggtcatccacaatgcagcgtttgatatcggcatgatggatgct
gaatttaatcgcctgaacatgacaaacacccgagagttttgcggtgtgttagatacctta
ttgctggctcgtgaaatgttcccgggctcaagggtcagccttgacgcgttatgtaagcgt
tatgacattgataacagtcatcgtgaattacacggcgcactgttggatgctgagattctg
gcggatgtttacctgatgatgacgggtgggcaaaccgacctggcgttagcgatggaagaa
gggcagcaaaatggtgtggttgatattgccttagatgattctttgttaaatgttgaactg
cccattgttcgtgcatcagctaccgaagttgaggcgcatgagcagtttatggatttggtt
gacaaaaaaagtgaaggggcgatctggcgtcgcccttaa
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