Bacterioplanoides sp. SCSIO 12839: KFF03_09575
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Entry
KFF03_09575 CDS
T08310
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bacz
Bacterioplanoides sp. SCSIO 12839
Pathway
bacz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bacz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KFF03_09575 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bacz03400
]
KFF03_09575 (recD)
Enzymes [BR:
bacz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KFF03_09575 (recD)
DNA repair and recombination proteins [BR:
bacz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KFF03_09575 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
Helicase_RecD
UvrD-helicase
AAA_22
RecD_N
UvrD_C
SLFN-g3_helicase
nSTAND3
AAA_28
TrwB_AAD_bind
AAA_5
AAA_7
AAA_16
MukB
NTPase_1
FtsK_SpoIIIE
Herpes_Helicase
AAA_24
AAA_29
SRP54
Terminase_6N
DO-GTPase1
ResIII
ATPase
AAA
cobW
Motif
Other DBs
NCBI-ProteinID:
UTW46853
UniProt:
A0A9J7AEC8
LinkDB
All DBs
Position
complement(2079934..2081958)
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AA seq
674 aa
AA seq
DB search
MINNLPAADDNERFTQLKARCLELCGQHKLRHIDLHMAEQVIAYEPDLSDQQRIILYLLV
VLLSDALAKGQVCLPLSGKHASSSDNIAMMLPELAVFWPKGIVADQVLSECVSVYCYRPD
QNFDEHCFDRRWENQPLVLDLCYPQARLYLARYYFYELAVYRSVQLRLSTVQESAPVNAN
LKQTLHRLFIPRSDNTIDWQSIAAATACLQRFTVITGGPGTGKTTTVTRLLSALLSQQPE
MSIALAAPTGKAAARMTESIRGAKLKAAQEKETSGGELPLAERIPDNSFTLHRLLGWSPR
GFRYHQQHPLPYDCVVVDEASMIDLPMMSHLMQALSDDTRLILLGDRDQLASVEAGSVLA
DLCDAGQEHGLQPAFAEQLQQLTGLDLSAYKTQNRSLMQNALAQLRVSHRFDANSGIGQL
AGAVNNGDVNKALRCFNHFSDIDIFWHQDTSANDVLQSWQPHVLKGYRHYCKTVIEQGRR
QNFSAILEAFNDFQVLLATRQGLTGVEAVNQRIEQLLRPQLDPQQQYSGAMYPGRAIMIS
RNDYDLGVFNGDIGIVVEVPGDVAGEKKLKVAFQSLDQGQSHIRLLMSNRLPEHETAFAM
TVHKSQGSEFNNVFMMLPQQWQSVITRELIYTAITRAKHHFSLLTSMHSLQTGAVSQVRR
ASGLRDRLWEEPKG
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgattaataacttgccggcagccgacgataacgagcgttttacacaacttaaagcccgt
tgccttgaattgtgcggccaacataaattacgccatattgatctgcacatggcggaacag
gtaattgcttatgagcccgacctgagtgatcagcagcggattattttgtatctattggtg
gtgttgctcagtgacgcgttagcaaaagggcaggtgtgcttaccattatcgggcaagcat
gcttcctcttcggataatatcgcgatgatgttacccgagttggctgtgttctggcctaaa
ggcattgtagccgatcaggtgttgtctgaatgtgtatcggtttattgttatcgccctgac
cagaattttgatgagcactgctttgatcgccgttgggaaaatcaaccgctggtgttggat
ctctgctacccacaggcacgtttgtatctggcgcgttattatttttatgagctggcggtt
tatcgctcggttcagctgcgcctgagcactgttcaggaatcagcaccagttaatgcaaac
ctgaaacaaaccctgcatcgtttatttattccccgctctgataacaccattgattggcaa
agtattgccgcagcgacggcgtgcttacagcgttttaccgtgattaccggcggaccggga
accggaaaaaccacgacggtaacgcgcctgctcagtgctttgttaagtcagcagccggag
atgtcgattgcattggctgcgcccacgggcaaagcagcagcacgcatgaccgaatcgatt
cgtggtgccaagttaaaagctgcgcaagaaaaagaaacgtccggcggcgaattgccctta
gccgaacgtattccggataatagctttactttgcatcgattattgggttggtcaccacgt
ggtttccgttatcaccaacagcatccgttgccttacgattgtgtggtggtggatgaagca
tcgatgattgacttgcccatgatgtcacacctgatgcaggcgctgtcggacgatacccgg
ttaattttgttgggtgatcgtgaccagctggcgtcggttgaagccggtagtgtattagct
gatttatgcgatgcaggtcaggaacacgggttgcaaccagcttttgcagagcagctacag
caactgaccggactggatctcagcgcgtataaaacacaaaaccgcagtctgatgcagaac
gcattggcgcaattgcgggtgtcccatcggtttgatgcaaacagcggcattggccaatta
gcgggtgccgtcaacaatggggatgtgaataaagcattgcggtgttttaaccacttcagc
gatatcgatatcttttggcatcaggacaccagtgccaacgatgtgttgcaaagctggcag
ccacatgtattaaaaggctatcgccattattgcaaaacggttatcgagcaagggcgtcga
cagaatttcagtgcaattctcgaggcttttaatgattttcaggtattactggcgacccgt
cagggattaaccggtgttgaagcggttaatcaacgcatcgaacaattattgcgccctcaa
ctggatccgcagcaacagtattccggtgccatgtatccaggtcgtgccattatgatttcc
cgcaatgattatgatctgggggtgtttaatggtgatattggtattgtggttgaggtaccc
ggcgacgttgctggtgagaaaaaattaaaggtggcttttcaaagcctggatcagggacaa
agtcacattcgtttattaatgagcaatcgactgcctgagcatgaaacggcttttgcgatg
acagtccataaaagtcagggatctgaatttaataatgtatttatgatgctgcctcagcaa
tggcaaagtgtgatcacccgagagctgatttacaccgcaattacccgggccaaacatcat
ttcagcttattaaccagtatgcacagtttacagacaggtgctgtgtcgcaggtgagacga
gcaagtggtctgcgtgatcggttatgggaagaaccaaaaggataa
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