Bacterioplanoides sp. SCSIO 12839: KFF03_11700
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Entry
KFF03_11700 CDS
T08310
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
bacz
Bacterioplanoides sp. SCSIO 12839
Pathway
bacz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bacz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
KFF03_11700 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bacz03019
]
KFF03_11700 (rnc)
03009 Ribosome biogenesis [BR:
bacz03009
]
KFF03_11700 (rnc)
03036 Chromosome and associated proteins [BR:
bacz03036
]
KFF03_11700 (rnc)
Enzymes [BR:
bacz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
KFF03_11700 (rnc)
Messenger RNA biogenesis [BR:
bacz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KFF03_11700 (rnc)
Ribosome biogenesis [BR:
bacz03009
]
Eukaryotic type
90S particles
RNase
KFF03_11700 (rnc)
Prokaryotic type
rRNA processing factors
KFF03_11700 (rnc)
Chromosome and associated proteins [BR:
bacz03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
KFF03_11700 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
SUV3_C
Motif
Other DBs
NCBI-ProteinID:
UTW47247
LinkDB
All DBs
Position
complement(2558076..2558765)
Genome browser
AA seq
229 aa
AA seq
DB search
MNNPFLKLSQRLGHTFTDQSLVELALTHRSKGVQNNERLEFLGDSILSLVISEDLYQRFP
EAKEGKLSRLRARIVKGKTLAEVAKEFELGDFLLLGSGELKSGGHKRDSILADAVEALIG
AIYLDAGIDVVRERVLAWFASRLDNLSLEDPIKDPKTQLQEIQQAAGSRLPKYEVLSVDG
PTNEQVFTVTCFIPEIDAPVEAEGSSRRNAEQTAAAVVLKQLQSDEESA
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgaataacccatttctcaaattgtcccaacgtttgggccatacctttactgatcagagc
ctggttgaattggctctgactcaccgctctaaaggcgttcagaataatgaacgccttgaa
tttttgggtgattccattctgagtctggttatttccgaagacttataccaacgcttcccg
gaagcgaaagaaggcaaactcagccgtttgcgtgcacgtattgttaaagggaaaaccctg
gccgaagtcgctaaagaatttgagttaggtgacttcttattattaggttccggtgaatta
aaaagtggcggtcacaaacgtgactccattctggcagatgcggtagaagcgttaattggt
gcgatttatctggatgccggcattgatgtggttcgtgagcgggttttagcctggtttgct
tcgcgtctggataatctgtctctggaagatcctattaaagacccaaaaacccagctgcag
gaaattcagcaagccgcaggctctcgtttgcctaaatacgaggtgctgtcggtggatggc
ccaaccaatgagcaggtgtttactgtcacctgttttattcctgaaattgatgcaccggtt
gaagcggaaggctccagccgtcgtaatgctgaacagactgctgctgcggttgtcttaaaa
caacttcaatcagatgaggaatctgcatga
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