Bacterioplanoides sp. SCSIO 12839: KFF03_12080
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Entry
KFF03_12080 CDS
T08310
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bacz
Bacterioplanoides sp. SCSIO 12839
Pathway
bacz00061
Fatty acid biosynthesis
bacz00071
Fatty acid degradation
bacz01100
Metabolic pathways
bacz01212
Fatty acid metabolism
bacz02024
Quorum sensing
bacz04146
Peroxisome
Module
bacz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bacz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
KFF03_12080
00071 Fatty acid degradation
KFF03_12080
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
KFF03_12080
09145 Cellular community - prokaryotes
02024 Quorum sensing
KFF03_12080
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bacz01004
]
KFF03_12080
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bacz04147
]
KFF03_12080
Enzymes [BR:
bacz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
KFF03_12080
Lipid biosynthesis proteins [BR:
bacz01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
KFF03_12080
Exosome [BR:
bacz04147
]
Exosomal proteins
Exosomal proteins of breast milk
KFF03_12080
Exosomal proteins of breast cancer cells
KFF03_12080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
UTW47318
UniProt:
A0A9J7AIU2
LinkDB
All DBs
Position
complement(2637123..2638844)
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AA seq
573 aa
AA seq
DB search
MEASFWDGKRAPGVPDTINLSEYDAVVEVIEHSFKRYAERPAFTSIGYTLTYQQIDEYSA
AFAAYLQNHTTLKPGDRIAIQMPNILQFPIAMYGALRAGMVVVNTNPLYTEREMKHQFND
SGAKALVCMDVFAQSVQNIKDETGLQHIIVTSLADMLPFLKRTLINNVAKYVKKMVPAYS
LPQAVSFRQALAQGAKHNGFEKNYIKNPDDTIILQYTGGTTGVAKGAELTNRNLVANMMQ
AHASLQQVDDKGQPLKPTSGAKIVAPLPLYHIYSFTVHLMALFESGDHSILIANPRDTDM
FVRMMKPHQLTGIIGLNTLFVSLLAHKEFREMDFSQLRITLSGGTALVDDTASRWKELTG
VGISEAYGLTECSPAVTMNPGAGLERQGTVGLAVPGTALKCIDDEGNEVAIGERGELCVN
GPQVMKGYWNRPEATAETFTPDGKWFRTGDVAVIDEDGFVKIVDRIKDMILVSGFNVYPN
EIEDVVAAHPSVENCAAIGIPDDKTGEAVKLFVVASDSNVTVEEIRNFCRDKLTAYKVPR
YVEFREELPMTPVGKILRRELKDEENAKQAEPA
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
gtggaagcatctttctgggatggtaagcgcgcacctggcgtgccagatacgattaatctg
agcgaatacgacgcagttgttgaagtgatagaacactctttcaaacgttatgctgagcgt
ccggcattcaccagtattggttatacactcacgtatcaacagattgatgaatacagtgca
gcctttgcggcttatctgcaaaatcatacaaccctgaagcccggtgatcgcatcgcgatt
cagatgccaaatattctgcaattcccgattgcgatgtacggtgcactgcgtgccggcatg
gtggtggtaaacaccaacccgctgtacaccgaacgagagatgaaacatcagtttaatgat
tctggtgccaaagctctggtgtgcatggatgtgtttgctcaatccgtacagaacattaaa
gacgaaacgggtttacagcatattatcgtgacgtcgctggcggatatgttgcctttcctc
aagcgtactctgattaacaacgtcgctaagtacgttaaaaagatggttccggcctacagc
ttgccgcaagcggtgtcttttcgtcaggccctggctcagggcgcgaaacataatggtttt
gagaaaaactatattaagaatccggatgacaccattattctgcaatacaccggtggtacg
accggtgtagccaaaggtgcagagctgaccaaccgtaacctggttgccaatatgatgcag
gctcacgccagcttgcagcaggttgacgacaaagggcagccgttaaaaccaaccagcggt
gcaaaaattgttgcgccacttccgctgtatcacatttattcatttactgtgcacttaatg
gccctgtttgaatcgggtgatcacagtattctgatcgctaacccgcgtgataccgatatg
tttgtacgcatgatgaaaccgcatcagctaaccggcattattggtttaaacaccttgttt
gtttctttgctggctcacaaagaattccgtgagatggacttcagtcagctgcgtatcacg
ttatcgggtggtacggctctggtggacgacaccgccagtcgctggaaagaattaaccggt
gtgggtatttcggaagcttatggtttaaccgaatgttctccagccgtgaccatgaatccg
ggtgccggacttgagcgtcagggaaccgttggcctggcagttcctggtactgccttgaag
tgcatcgatgatgaaggcaatgaagttgctattggtgagcgcggcgagctgtgcgtgaac
ggcccgcaggtcatgaaaggttactggaatcgtcccgaagcgacggcagaaacattcacc
ccggatggcaaatggttccgtactggtgacgttgcggtgattgatgaagacggtttcgtc
aaaatcgttgaccggattaaagacatgattctggtgtcaggttttaacgtttatccaaat
gaaattgaagatgtggttgccgctcatccgtcggttgaaaactgcgcggccattggtatc
cctgatgacaaaaccggcgaagcagtgaagttatttgtggttgcgtcagactcgaatgtg
acggtcgaagaaatccgtaacttctgccgtgataaattaacagcgtacaaagtgccacgt
tatgttgaattccgagaggaattaccaatgactccagttggtaaaattctgcgtcgtgaa
ttaaaagacgaagagaacgcgaagcaagctgagccagcctga
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